Pseudochaenichthys georgianus (South Georgia icefish): 117457903
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Entry
117457903 CDS
T09629
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117457903 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117457903 (exosc5)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117457903 (exosc5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117457903
NCBI-ProteinID:
XP_033954059
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All DBs
Position
13:3933225..3943634
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AA seq
220 aa
AA seq
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MMEVCGSTNVSLREFGCEQTLLSRPDGSASFVQGDTSVIAAVYGPAEVKVSKEIYDRATL
EVLIQPKVGLPSVRERSQEQCVRETCEASLLLTLHPRSSLTLVLQLIHDDGSRLACFLNA
ACMALMDAGLPMSCLFCGVTCAINADSEIITDPTAAQEKESRALMTFAIDSKEQRVMMSY
TKGSFSVHELQQCIAVSQKASENIFQFYRDSVRRRYSKNL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagtgtgcggctctacgaacgtttctctgagggagttcggctgtgaacaaacg
ttactgtctcgaccggacgggtcagcctccttcgtacaaggcgacacaagtgtgatagcc
gcggtgtacggaccagctgaggtcaaagtcagtaaggaaatctacgaccgagcaaccctg
gaggtgttgatccagcccaaagtgggactgcccagtgtaagggagcgatcccaggagcag
tgtgtgagggagacctgcgaggcgtctctgctcctgaccctccacccccgctcctccctc
accctggtcctccagctgatccatgacgacggctcccgcctggcctgcttcctgaacgca
gcctgcatggccctgatggacgcaggcctgcccatgagctgcctgttctgtggggtgacc
tgcgctatcaacgcagactctgagatcatcacggaccccaccgcggctcaggagaaggaa
agtcgagctttgatgacttttgctattgacagcaaggaacaaagagtgatgatgtcatac
accaagggatcgttttcagttcacgagctgcagcagtgtatagcagtcagccagaaggcc
tcagagaacatcttccagttctacagggactccgtcaggaggcgctactccaaaaacctc
tga
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