Pseudochaenichthys georgianus (South Georgia icefish): 117457912
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Entry
117457912 CDS
T09629
Symbol
als2b
Name
(RefSeq) LOW QUALITY PROTEIN: alsin
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117457912 (als2b)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117457912 (als2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
RhoGEF
PH
Motif
Other DBs
NCBI-GeneID:
117457912
NCBI-ProteinID:
XP_033954080
LinkDB
All DBs
Position
2:3464827..3492771
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AA seq
1649 aa
AA seq
DB search
MERKSSEDDAGGERGLLHTWKGYSCSVTPERLLLPGPVLQVALGTRHGVLLVEGGQVYSF
GELPWKQSQVSEPSKPTLEGALSGQRVVSVAAGSFHSGAVTEDGGVHMWGDNSSGQCGLS
GLSSVPNPTPVALLDPDNAPPQTVPVLELACGGGHTLALSAQREVWAWGSGSQLGLNISV
FPVWKPQKVEHFAGRCVLQVACGASHSLALVRCLGPQDLHRPPVDKCRQCHQMLYTMTDK
EDHVIISDGHYCPLRAELTEDEAPALTQGLKTEPALPSHTSPSPDPFSDPAQDSEREQES
ALANGGPPASGSDPSAESKEGGVSGVKSSPYPDEQAVKEYLKKLTEAEQVTKPSAGALTS
SSSTLNSLVASCASAVGERVASTYEALSLKKMMTYLPSGVARSGIPAGITGVLVGDTTAE
RVRLEDSTQAKKSSSTGDIREEEAEGLRRRLSLPGLLSQVSPRLLRRAGRPRMRAVDLTP
LGGASPEAQEVFPTLQTEVWSWGQGEDGQLGHGDNLARLQPLCIKSLNSKEVVRVEAGAH
HSLALTAQSQVFSWGSNTSGQLGHTESPSTVPRLAKLSEGIRVWDVSAGEKHTLLLADGD
CYRPIIYYSGQQVKEGAEESHAKEQGQRRRRGGEEEQRAGGYTRQPVLLPFCIDLGYVSN
VFAGGQRCVVLLDRNVMGFIASLHELAAAERKFYCKLSNIKTQIIRPLLELESLSSALGP
VVLGLLQTVAGRFSLLCHLTGQHAASLTGNLRRVRDVKSLLVLEHADIFLDSYSEYCSAV
DNLQVMGGFQTLTKPSIDFFGKSPELLKKLSECSEETPTVADLLGALFYLPTRHMQEYGR
LLLKLATCFEVSSEDYQRLQDSCSSFEALALKLKRKKKDAEYTFHFWKSFPGKMTDSLRK
PHRRLICESSNKALTLQNAGRFSVNWFIVFNDALVHAQFSTHHVFPLATLWVEPIPEENS
GPYGLKLITPEETFALLASSPTEKAKWLRSINQAVEQALGGAGQDTASIGSGSSQKTEPP
VSRTASYTFCKEGRLKEAKYGGHWLSGKPDGSGVLKWPDGRMYTGTFRNGLEDGFGEFVA
TNKTLNKNDQYQGHWKDGKMHGLGTYSYASGEVYDGCFQDSMRHGHGMLRSGKLNTSSPS
VFIGQWLQDKKTGYGVFDDITKGEKYMGMWQDHQRQGNGVVVTQFGLYYEGAFKENKMMG
TGILLSEDDTTYEGEFSDDWTLNGKGVLTMPNADYLEGSFNGEWGSGLKVTGSYFKPHLF
DTDKDKSRDVKLGRLCVCAEDKWQAVFEECWSELGCETPGQGENGKAWENIAVALTTSRR
LIQESPEALSRSHSRTLESLEVIPQHEGPITMERYHTIRLYLIKACDTPLHSLGRLLETL
VAVYRMTYVGVGANRRLLPQAVNEIKSYLNRIFLIVRFLFPDLPEEGGLIPEPTTNLQDE
REPGSSGAHLESPKPGRVVSSSALLLPVLLPRLYPPLFTLYALDKEKEDDVYWECVLRLN
KQPDLALLAFLGVQQKFWPVSIPTPMPELAEKQQVLSSTKDACFASAVETLQQISTTFTP
SDKLQVIQLTFEEITQTVQSLLKQDFLWSMDDLFPVFLYVVLRARIRNLGSEVSLIEDLM
DPCVQHGEHGIMFTTLKACYYQIQHEKIT
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaagagctccgaggatgacgctggtggagagcgaggcctgctccatacctgg
aagggctactcctgcagtgtcaccccagaaaggctgctcctccctgggcctgtccttcag
gtcgccctgggaacacggcatggcgttctgttggttgaaggagggcaggtgtacagtttt
ggggagttaccatggaagcagagtcaggtgtcggagccgtcgaagcccaccctggagggg
gcgctcagcgggcagcgggtggtcagcgtcgcagccggaagcttccacagcggggcggtg
acggaggacgggggggtccacatgtggggcgacaacagctcgggacagtgcggcctttcg
ggcctcagcagcgtccccaacccgactccggtcgctctgctggaccccgacaatgccccc
ccgcagacggtcccggtgctggagctggcctgcggcggggggcacaccctggctctgtcg
gcgcagcgggaggtgtgggcctggggcagcggctctcagctgggcctcaacatctccgtc
ttccccgtctggaaaccccagaaggtggagcactttgcgggcaggtgtgtgttacaggtg
gcctgcggggcctcacacagcctggctctggtgcgctgcctgggcccccaggacctccac
cggccccccgtggacaaatgcagacagtgtcaccagatgctgtacaccatgacggacaag
gaggaccacgtcatcatctctgacgggcactactgccccctcagggcggagctgacagag
gacgaggcccctgctcttacacaagggctcaaaacagagcccgccctcccctcacacacc
tccccctcccctgaccccttctctgaccccgctcaggactcagagagagaacaggagtca
gcactcgcaaatggaggacccccagcctcaggctctgacccctcggctgaatctaaagaa
ggaggggtttcgggggtcaagagttcaccgtatccagatgagcaggccgtcaaagaatac
ctgaagaagctgacggaggccgagcaggtcaccaagccctcagcaggggctctgacctcc
tccagctccaccctcaacagcctggtggcctcctgcgcctccgcagtgggggagcgggtc
gcctccacctacgaggccctgtcgctgaagaagatgatgacctacctcccctcaggagtg
gcgaggtccggcatccccgcagggataacgggggtcttggtgggcgacaccaccgcagag
cgcgtccgcctcgaagactccacccaggccaagaagagctccagcaccggggacatccgc
gaggaggaggcggagggtctgcggcgccgcctctctctgccgggactcctctctcaggtg
tccccgcggctgctgaggagagccggacgccccaggatgcgtgcagtggacctcacccct
ctggggggggcgtcccctgaggcccaggaggtgttccccaccctgcagacggaggtgtgg
agctggggtcagggcgaggacggacagctggggcacggagacaatctggccaggttacag
cctctgtgcatcaagagtctgaacagtaaggaggtggtgcgggtggaggccggcgctcac
cattccctcgctctcaccgctcagtctcaggtgttttcctggggaagtaacacttctggc
cagctgggacacacggagtcacccagcaccgtcccccggctcgcaaagctatcagagggg
atccgggtctgggacgtgagcgccggagagaaacacaccctgctgctcgcagacggagac
tgctaccggccaatcatctactacagtgggcagcaggtgaaggagggggcggaggagagc
cacgccaaggagcagggtcagaggaggaggagggggggggaggaggagcagagggcgggg
ggctacacccggcagcctgtactgctccctttctgcattgacctcggctatgtgagcaac
gtgtttgccggcggccagcgctgcgtggtgctgctggacaggaacgtgatgggcttcatc
gccagcctccacgagctcgccgccgcagagaggaagttctactgcaagctgagcaacatc
aagacgcagataatacgccccctgctggagctagagtccctgagctcggccctgggtccg
gtggtcctcgggctgctgcagacggtggcgggtaggttcagtctcctgtgtcacctgacc
ggacagcacgccgccagcctcactgggaacctgcggcgcgtccgtgacgtcaagagcctc
ctcgtcctcgaacacgccgacatcttcctcgactcttacagcgagtactgcagcgctgtg
gacaacttgcaagtgatggggggtttccagaccctgaccaaaccctcaatagacttcttt
gggaagagtcccgagctgctgaagaagctgtctgagtgcagcgaggagacccccaccgtg
gccgacctgctgggggcgctcttctacctcccgactcgccacatgcaggagtacggccgc
ctgctgctcaaactggcaacctgctttgaagtgagctccgaggactaccagaggctgcag
gacagctgctccagcttcgaagccttagctcttaaactgaagaggaagaagaaggacgcc
gaatacaccttccacttctggaagagcttccccggcaaaatgacggactctctgaggaag
cctcatcgccggctcatctgcgagagcagcaacaaagcgctgacgctgcagaacgccggc
aggttctccgtcaactggttcatcgtcttcaacgacgctctggtccacgcgcagttctcc
acccatcatgtcttccccttggccacactttgggtggagcccatcccagaggagaacagc
ggcccgtatgggttaaagttgatcacaccagaggagacgtttgccctgctcgcgtcctct
cccacggagaaggccaagtggctccgctccatcaaccaggcggtggagcaggcgctgggc
ggggcggggcaggacaccgcctccatcggctccgggtccagtcagaagacggagcccccc
gtctccaggaccgcctcctacaccttctgtaaggaggggcggctgaaagaggccaagtat
ggagggcactggctctcagggaagcccgacggcagtggcgtgttgaagtggcctgatggg
agaatgtacacggggacctttaggaacggactggaagatggctttggtgaatttgtggct
accaacaagacgctcaacaagaacgatcaataccaaggtcactggaaagacggcaagatg
cacggcctcgggacatacagctatgccagcggcgaggtctacgacggctgcttccaggac
agcatgcgacacggacacggcatgctgcgcagcgggaagctcaacacctcctcccccagc
gtcttcatcggacagtggctgcaggacaagaagaccggatacggagtcttcgatgatatc
acaaaaggagagaagtacatgggcatgtggcaggatcaccagcggcagggcaacggggtc
gtggtcactcagtttggactttattacgaaggagccttcaaagaaaataagatgatgggt
accgggatcctgctgtccgaggacgacaccacatacgagggggaattctctgatgactgg
accctcaacggaaagggtgtgctcaccatgccaaatgctgattacctggagggctccttt
aacggggaatggggctccggcctcaaagtgacgggctcctacttcaaacctcacctgttc
gacacggacaaggacaagagccgcgacgtgaagctggggcgtctgtgtgtgtgcgcggag
gacaagtggcaggcggtgttcgaggagtgctggagtgagctgggctgtgagaccccaggc
cagggagagaacgggaaggcctgggagaacatcgccgtggcgctcacaaccagccggaga
ctcatccaggaaagtccggaagcgttgtctcgaagtcacagcaggaccctggagagtctg
gaggtgatcccgcagcacgaaggaccaatcaccatggagagatatcacaccatccgactc
tacctcatcaaggcgtgtgacacccccctccactcgctgggccggctgctggagaccctg
gtggcggtgtacaggatgacctacgtgggcgtgggagccaatcgtcggctgctgcctcag
gcggtcaacgagatcaagtcgtacctcaaccgcatcttcctcatcgtcaggtttttattc
ccagacctgccagaagagggcggtctcattccagagccgaccaccaacctccaggacgag
agggagccgggctccagcggtgcccatctagagtcacctaaacctggccgtgtggtgagc
agctcggctctgctgctccccgtgctgcttcctcgcctctacccccccctcttcaccctc
tacgctctggacaaggagaaagaggacgacgtgtactgggagtgtgtgctccgcctcaac
aagcagcccgacctcgccctgctcgccttcctcggggtccagcagaagttctggccggtt
tccattcccacacccatgcctgaactggcagagaagcagcaggtcctgtccagcactaag
gacgcctgcttcgcctcggcagtggaaacactacaacagatcagcacaaccttcaccccg
tcagacaagctgcaggtgatccagctcaccttcgaggagatcactcagaccgtgcagtcg
ctgctgaagcaggacttcctgtggtccatggacgaccttttccccgtcttcctctacgtg
gtgctgcgcgcaagaatccgaaatttggggtcagaggtcagcctgattgaagacctgatg
gacccctgcgtgcagcacggagagcacggtatcatgttcaccacactcaaggcgtgttac
taccagatccagcatgagaagatcacctaa
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