Pseudochaenichthys georgianus (South Georgia icefish): 117457924
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Entry
117457924 CDS
T09629
Symbol
egfem1
Name
(RefSeq) EGF-like and EMI domain containing 1
KO
K24333
multiple epidermal growth factor-like domains protein 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117457924 (egfem1)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
117457924 (egfem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
EGF_laminin
cEGF
EGF_CA
EGF_2
EGF
EGF_Teneurin
EGF_TEN
hEGF
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
117457924
NCBI-ProteinID:
XP_033954089
LinkDB
All DBs
Position
13:complement(39261844..39344534)
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AA seq
1616 aa
AA seq
DB search
MFSDIFCVILFCTLHFIASSSELQPAMPNVCADQQMSMLGARQPCVQAFTRMVKVWKQGC
SSHRWCMGYERRTAYYTVYRQVYNMDTHTVYKCCPGWRQEGEEMGCLHRVCSADTCFNRG
QCTETGDKICQCPMGFKGTRCQYDVNECERDEGGCEGFCCNTIGSFYCKCPEGSRLGPDG
RACHDVNECEELNGGCQQTCVDTPGSHHCECNEGFRMHSDARTCIAVNSCSVLNGGCEHK
CVDTGNNHYKCECRKNYQLKRDGRHCELRDPCADRNGGCAQLCLSEDTRVHCSCRPGFTL
AADGKNCEDIDECGSGRAKCSHRCVNTLGSFSCVCNPGFELGADGKQCYRIEMEIVNSCE
KINGGCSHHCEHTTNGPLCSCNHGYQLALDRKTCVDSDECLGGGACCRHFCRNYPGGYEC
SCRAGHRLNADGCGCDDVDECLAETSGCEHDCVNTLGTYECFCELGFRLDQDQHSCISLY
GELEDEEDEEEDEDEQLEVHRLPDLLFRNVPQLLQYTAASHSRYVSDEDDGGDGEVEIQR
GRRGELRLSSSIVCLDGSFGDDCSVSCEDCDHGVCSENGDRCECAAGWTGLICNKTCSQG
TYGPACNSLCRCQNGGSCDPVTGKCVCPPGVQGLLCEDGCPRGHFGMHCRRKCKCPNNGH
CHRLYGGCLCSPGLYGRLCHLSCPRWTHGASCSRECDCVQEHSSGCDPKTGSCFCKTAYH
GPQCEKECEPGFFGAGCEQPCDCPGGGSCDPRTGECGQRCPAGLHGEKCQLACPSLRYGE
SCRLTCGCGGAPCDPVTGRCICPAGKTGDSCHEDCPDAFWGMKCQSACPDCENGASCNKE
SGVCECRPGFMGNLCQNECPPGLHGPGCEGLCSCPPDTDCDPQTGHCLCPAGKRGPDCAT
ACESGYWGPGCVNTCECREISESCDPLSGQCVCEAGFTGDHCEKKCVHGSFGRGCVLPCR
CESGALCDHVSGACTCSPGYAGTFCEKMCPDGFYGLDCGQMCECRNGARCHHITGGCLCT
AGWAGPHCILACPEGTFGERCSQTCECERGSRCDHVSGGCSCAAGLTGVRCQLPCPAESY
GEQCSGQCLCGNGGSCDSVSGQCSCPPGWRGATCESECEEGRFGENCSQTCSCTSGGRCD
GETGRCVCLPGWTGDLCQSACSEGFFGERCVQRCDCVHSPSCHHMTGRCECEPGWRGARC
DKHCLPGSHGASCAQPCGCQAGVSCHHETGSCGCPAGLMGPGCETPCPAGVFGMNCSQLC
RCSRDQEQCHPATGKCSCLPGYYGARCELRCRAGTFGPNCKSRCSCTSGGRCDFRTGTCY
CPAGFIGADCSLRCPSGYYGKDCAKMCSCGEGGQCHPATGKCICAPGRMGQSCQQACPRG
RYGLQCRNTCSCQNGGLCDPIHGSCRCGLGWTGARCDSACSQGKYGFDCAQDCPCLNNGT
CDRFSGTCGCSAGYYGHSCQHSCPSGFFGMTCARTCDCKAGRTCDHVTGKCVCPPGYHGP
QCERRCESGRFGLSCGESCGCAGEAPCDPSTGRCLCPAGRTGQRCEKDCGGERFGPDCSL
PCQCSHRARCEGLSGRCLCPLTWLGPTCTEALPHQTPRPLNFSVSQRKRRAGSNTT
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagacattttctgtgtgatattattttgcactttgcacttcattgcatcatct
tcggagctgcagcctgccatgccgaatgtgtgtgctgaccagcagatgtctatgttgggg
gcccgtcagccttgtgtccaggctttcacccgcatggtgaaagtgtggaagcagggctgc
agcagccacagatggtgcatgggctatgagagaaggacagcatactacacagtgtacagg
caggtgtacaacatggacacacacacagtctataagtgctgccctggctggagacaggag
ggtgaagagatgggctgtctgcatagggtgtgtagtgcagatacatgtttcaatagaggc
cagtgcacagagactggagacaagatctgtcagtgtcccatgggcttcaaagggacgcga
tgccagtatgatgttaatgaatgtgagcgggatgaaggcggctgtgagggattctgctgc
aacaccatcggcagcttctactgcaagtgtcctgaaggcagccgactggggccggatggc
agagcgtgtcacgatgtcaatgagtgtgaggagctgaatggaggatgccagcagacgtgt
gtggacacaccgggctctcaccactgcgagtgcaacgagggcttccgcatgcactctgat
gcacggacctgcattgctgtgaactcctgctcagtcctgaatggtggatgtgagcacaag
tgtgtggacacgggcaacaatcactacaaatgtgaatgtaggaagaactaccagctgaag
agagacgggcgacactgtgaattgagggacccctgtgcggacaggaatggaggctgcgcc
cagctgtgtctttcagaagacactcgggttcactgcagctgccgacctggttttacactg
gctgcagacgggaagaactgtgaagacattgatgagtgcggttcaggccgtgccaagtgt
tcccacagatgtgtcaacacgctgggctccttcagctgtgtgtgtaatccgggttttgaa
ctgggtgccgatggcaaacagtgctaccgcattgagatggagattgtgaacagctgtgag
aagatcaacggaggctgctctcatcactgcgaacacaccaccaacggaccgctgtgttcc
tgtaaccacggctaccagctggccctggacaggaagacctgtgtggacagtgacgagtgt
ctcggtgggggggcctgctgccgtcacttctgcagaaactacccgggcggctacgagtgc
agctgcagagccggccacagactcaacgcagacggctgcggctgcgatgacgttgacgag
tgcctggcagagacttcgggctgtgaacacgactgtgtcaacaccctgggaacttacgag
tgtttttgtgagctgggtttccgcttggaccaggaccaacactcctgcatttctctgtat
ggggaactggaagatgaagaggatgaggaggaagacgaggatgaacagctggaggtccat
agattaccagacctgctgtttcgcaatgttcctcagctcctgcagtacacagcggcctca
cactcccgttatgttagtgatgaagatgatggtggtgacggggaagtagagatccagagg
gggcgccgaggagagctcagactgtccagcagcatagtgtgtctggatggctcgttcggg
gatgactgcagtgtgagctgtgaggactgtgatcacggagtgtgtagtgagaacggagac
cggtgtgagtgtgcagccggatggacagggctcatctgtaacaagacgtgctcccagggg
acctatgggccggcctgtaacagtctgtgtcggtgccagaacggaggctcgtgtgacccc
gtgaccgggaagtgtgtgtgcccccccggggtgcagggcctgctgtgcgaggacggttgt
cccaggggtcatttcgggatgcactgcaggagaaagtgtaagtgtcccaacaacggacac
tgccaccgtctgtacgggggctgcctctgctctccgggactgtacggccgcctctgccac
ctgtcttgtcccaggtggacgcacggggccagctgttcccgggaatgtgactgtgttcaa
gaacattcctctggctgcgaccccaaaacaggaagctgtttctgtaagaccgcctaccac
ggaccacagtgtgagaaagaatgtgagccagggttcttcggtgccggctgtgagcagcca
tgtgactgtccaggtggagggtcatgtgacccgcggaccggggagtgcggtcagagatgt
cctgcaggtcttcacggagaaaaatgtcaacttgcctgcccgtcgctgagatatggtgag
agctgtcgtctgacctgtggctgtggaggagctccatgtgatcctgtaaccggacgatgc
atctgtcctgcagggaagactggggactcctgtcatgaagactgccctgatgcattctgg
gggatgaagtgccagtcagcatgtcctgactgtgagaacggagcctcctgcaataaggag
agcggagtgtgtgagtgcagaccaggcttcatggggaacctctgccagaatgagtgtccc
ccaggtctccatggtccaggctgtgagggtctctgctcctgcccccccgacactgactgc
gacccccagacgggacactgcctctgccctgctggcaaaagaggccctgactgtgcaaca
gcgtgtgaatctggttactggggcccggggtgcgtgaacacatgcgagtgcagagagatc
tcagagagctgcgacccgctcagcggacagtgtgtgtgtgaggcgggcttcaccggggac
cactgtgagaagaagtgtgtgcatggcagttttgggcgggggtgtgtgctgccgtgccgc
tgtgagagcggagcgctctgcgaccacgtgagcggagcctgcacctgctcacctgggtac
gccggcaccttctgtgagaaaatgtgcccggacggcttttacggtcttgactgtggccag
atgtgtgagtgcaggaacggtgcccgctgccaccacatcacaggaggctgcctgtgcacc
gccggctgggcaggaccacactgcattctggcgtgtccagagggtacttttggggagcgg
tgcagtcagacctgtgagtgtgagcgggggtccaggtgtgaccacgtcagcggggggtgc
agctgtgccgccggcttgactggagtccgctgccaactgccctgtcctgcagagtcttac
ggtgaacaatgctctggtcagtgtctgtgtggaaacggaggctcctgtgatagcgtcagt
ggtcagtgctcctgcccccccggctggagaggggctacctgtgagtcagagtgtgaggag
ggacggtttggagagaactgcagtcagacctgcagctgtacgagtggggggaggtgtgac
ggagagacaggacgatgtgtgtgtctgcctggatggacgggagacctctgtcagtcagcc
tgttctgagggattctttggagagcgctgtgtgcagaggtgtgactgcgtccatagtccg
agttgccaccatatgacgggtcgctgtgagtgtgagccaggctggaggggggccaggtgt
gacaaacactgcctcccggggtcccacggtgcttcctgtgcccagccgtgtggctgccag
gccggggtgtcctgccaccatgagacggggagctgtgggtgtcccgccggactcatgggg
cccggctgcgagacaccctgtcctgccggcgtgttcgggatgaactgcagccagctgtgc
cggtgttcaagagaccaggagcagtgccatcctgcgacggggaaatgcagctgcttaccc
ggatactacggggcccgctgcgagctacgatgtcgagcgggtacttttgggcctaactgc
aagtccagatgcagctgcaccagtggcggtcgctgtgacttcaggaccgggacctgctac
tgcccggctggcttcattggagccgactgcagcttacgctgtccaagcgggtattacggg
aaggactgtgctaagatgtgctcctgtggggaaggagggcagtgccacccagctactgga
aagtgtatctgtgcccctggtaggatgggacagtcctgccaacaagcatgtcctaggggg
cgctatggcctgcagtgcagaaacacgtgcagctgtcagaacgggggtctgtgtgatcct
atccacgggtcttgccgatgtggactgggctggaccggagcgcgctgtgactcggcctgt
tcacagggaaagtatgggtttgattgtgcacaagactgtccatgcctcaacaacgggacc
tgcgaccgtttctccggcacctgcggctgttctgctggatactacggccactcctgtcaa
cacagttgtccatctgggttctttggcatgacatgtgcccgtacatgtgactgtaaagcc
gggcggacatgtgatcacgtgacaggcaaatgtgtgtgtccaccaggctaccatggccct
caatgtgaaagaaggtgtgagtctggccggtttggattgagctgtggagagtcatgtggc
tgtgctggtgaggccccatgtgacccatctaccgggcggtgcctctgtcccgcaggaagg
acgggacagagatgtgaaaaagattgtggtggagagcgcttcggaccagactgctctctg
ccgtgtcagtgctcccacagggcccgctgtgaggggctcagtgggcggtgcctgtgccct
ctcacgtggctgggccccacctgtaccgaagcgctgccacaccaaaccccgcgaccgttg
aacttttcagtgtcccaaagaaagagaagagcgggcagcaacaccacatga
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