Pseudochaenichthys georgianus (South Georgia icefish): 117458034
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Entry
117458034 CDS
T09629
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117458034 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117458034 (chrne)
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117458034 (chrne)
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Paralog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117458034
NCBI-ProteinID:
XP_071061463
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Position
14:complement(23042437..23061156)
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AA seq
501 aa
AA seq
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MQSELVHCNEEGELIDKLFKGYNKNIRPVKHPDDKLDVDIKLTLTNLISLNEKEETLTTN
VWIQIQWKDYRLVWNASDHHNITTIRVPCNNVWLPDIVLENNIDGKFDVAYYANVLLYNY
GGIFWLPPAIYRSTCSIEITYFPFDYQNCTLAFRSQTYSANEVVLHLALDENPPNVMIEW
VDIDPQAFTENGEWAIVHRPARKMIYEHYTPDDLEYQEILFNIVIQRKPLFYVINIILPC
SLISSLVVLAYFLPAQAGGQKLTVAISVLLAQTVFLFLIAQKIPETSLSVPLIGKYLIFV
MSVTTLIATNQIVVLNISLRTPSTHNMPRWIKILFLKWLPRFLGMPPLVDDSEEVVVNGV
TERRRSSFGLMQRAEEYVMKQPRSEMMFDRQRQKHGLSQSVLDHLDISSTANLYKSLAQT
APEIKQCVDACNFIAESTRQQNNIGSEIESWVLIGKMIDKVCFWIAITLFILGTVAIFLT
GHFNRAPEFPFPGSSKKYLPD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcagagcttgtgcactgtaatgaggagggggagctgatcgacaagttgttcaaa
ggctacaacaagaacattcgcccggtgaagcatcctgatgataagctggacgtcgatatt
aagctgaccctcaccaacctcatctccctgaatgaaaaggaggagactctaacgaccaat
gtgtggattcagattcaatggaaagattatcgccttgtgtggaacgcatctgaccatcac
aacatcaccactattcgtgtcccatgcaacaatgtttggcttcctgacattgtccttgag
aacaacattgatggaaagtttgacgtggcgtactacgccaacgtgctgctctacaactat
ggtggtattttctggctgccacccgccatctatcgcagcacgtgctccatcgagatcacc
tacttcccatttgattatcaaaactgcacactagcattcagatcccagacatacagtgcc
aatgaagtggtcctccacttggctcttgacgagaaccccccaaacgtcatgattgagtgg
gtggatattgacccccaggctttcacagaaaacggcgagtgggccattgtccatcgtccg
gccaggaaaatgatctacgagcactacaccccagatgacctggagtatcaggagatattg
ttcaatattgtcatccaaaggaagcccctcttctatgtcatcaacatcatcctgccctgc
tccctcatctcctctctggtagtgctggcctacttcctacctgctcaagccggtggacag
aagttgacggtggcaatctccgtcctgctcgctcaaactgtcttcctcttcctcatcgct
cagaagatccctgagacctctctctctgtgcctctcattgggaagtacctgatctttgtc
atgtccgtcactacgctcatcgccacaaaccagattgtggtgctgaacatctcgctgcgc
acccccagcactcacaacatgccccgttggatcaaaattctcttcctgaaatggttacct
cgtttcctgggcatgcccccgctggtggacgacagcgaggaggtcgttgtgaacggcgtg
acggagcgccgccgcagctccttcggcctcatgcagagagcagaggaatatgtgatgaaa
caaccccggagcgagatgatgtttgacagacagagacagaagcatgggctctcacaatca
gttttggatcatttggatatcagcagcacagccaacctgtacaagagtttggcgcagacc
gcacccgaaatcaagcaatgtgtcgacgcctgcaacttcatagccgagagcacgaggcag
caaaacaacatcggatctgaaatagaaagctgggtgctgattggaaagatgatcgacaag
gtttgtttctggatcgccattactcttttcatcctcggcacggtggccatcttcttaaca
gggcacttcaaccgtgctcctgaatttccttttcctggttcgagcaaaaaatatctacca
gattaa
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