Pseudochaenichthys georgianus (South Georgia icefish): 117458034
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Entry
117458034 CDS
T09629
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117458034 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117458034 (chrne)
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117458034 (chrne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117458034
NCBI-ProteinID:
XP_033954163
EnsemblRapid:
ENSPGEG00000022122
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All DBs
Position
14:complement(23042432..23062637)
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AA seq
506 aa
AA seq
DB search
MKVIHRHAEKLHCNEEGELIDKLFKGYNKNIRPVKHPDDKLDVDIKLTLTNLISLNEKEE
TLTTNVWIQIQWKDYRLVWNASDHHNITTIRVPCNNVWLPDIVLENNIDGKFDVAYYANV
LLYNYGGIFWLPPAIYRSTCSIEITYFPFDYQNCTLAFRSQTYSANEVVLHLALDENPPN
VMIEWVDIDPQAFTENGEWAIVHRPARKMIYEHYTPDDLEYQEILFNIVIQRKPLFYVIN
IILPCSLISSLVVLAYFLPAQAGGQKLTVAISVLLAQTVFLFLIAQKIPETSLSVPLIGK
YLIFVMSVTTLIATNQIVVLNISLRTPSTHNMPRWIKILFLKWLPRFLGMPPLVDDSEEV
VVNGVTERRRSSFGLMQRAEEYVMKQPRSEMMFDRQRQKHGLSQSVLDHLDISSTANLYK
SLAQTAPEIKQCVDACNFIAESTRQQNNIGSEIESWVLIGKMIDKVCFWIAITLFILGTV
AIFLTGHFNRAPEFPFPGSSKKYLPD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgattcaccgccatgctgagaaattgcactgtaatgaggagggggagctgatc
gacaagttgttcaaaggctacaacaagaacattcgcccggtgaagcatcctgatgataag
ctggacgtcgatattaagctgaccctcaccaacctcatctccctgaatgaaaaggaggag
actctaacgaccaatgtgtggattcagattcaatggaaagattatcgccttgtgtggaac
gcatctgaccatcacaacatcaccactattcgtgtcccatgcaacaatgtttggcttcct
gacattgtccttgagaacaacattgatggaaagtttgacgtggcgtactacgccaacgtg
ctgctctacaactatggtggtattttctggctgccacccgccatctatcgcagcacgtgc
tccatcgagatcacctacttcccatttgattatcaaaactgcacactagcattcagatcc
cagacatacagtgccaatgaagtggtcctccacttggctcttgacgagaaccccccaaac
gtcatgattgagtgggtggatattgacccccaggctttcacagaaaacggcgagtgggcc
attgtccatcgtccggccaggaaaatgatctacgagcactacaccccagatgacctggag
tatcaggagatattgttcaatattgtcatccaaaggaagcccctcttctatgtcatcaac
atcatcctgccctgctccctcatctcctctctggtagtgctggcctacttcctacctgct
caagccggtggacagaagttgacggtggcaatctccgtcctgctcgctcaaactgtcttc
ctcttcctcatcgctcagaagatccctgagacctctctctctgtgcctctcattgggaag
tacctgatctttgtcatgtccgtcactacgctcatcgccacaaaccagattgtggtgctg
aacatctcgctgcgcacccccagcactcacaacatgccccgttggatcaaaattctcttc
ctgaaatggttacctcgtttcctgggcatgcccccgctggtggacgacagcgaggaggtc
gttgtgaacggcgtgacggagcgccgccgcagctccttcggcctcatgcagagagcagag
gaatatgtgatgaaacaaccccggagcgagatgatgtttgacagacagagacagaagcat
gggctctcacaatcagttttggatcatttggatatcagcagcacagccaacctgtacaag
agtttggcgcagaccgcacccgaaatcaagcaatgtgtcgacgcctgcaacttcatagcc
gagagcacgaggcagcaaaacaacatcggatctgaaatagaaagctgggtgctgattgga
aagatgatcgacaaggtttgtttctggatcgccattactcttttcatcctcggcacggtg
gccatcttcttaacagggcacttcaaccgtgctcctgaatttccttttcctggttcgagc
aaaaaatatctaccagattaa
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