Pseudochaenichthys georgianus (South Georgia icefish): 117458062
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Entry
117458062 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04517
IgSF CAM signaling
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117458062
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117458062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117458062
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117458062
Intermediate filaments
Intermediate filament-binding proteins
117458062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
117458062
NCBI-ProteinID:
XP_071061468
LinkDB
All DBs
Position
14:complement(33309955..33336868)
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AA seq
1316 aa
AA seq
DB search
MRLKSFTGSGLKHQAFMAELARNKEWIAKIETVFTKRTRLSQRRYRIRRYRIRRRKHPLL
RVSGCNSPLPPPRTQEGQELIQEKPELRSVVQQKLVEIRECWSDLESTTKAKARQLFENN
KPEPAVKSFSDLDSQLSHLEQQPPQLEQAHHLPTFNEQLQKFQAMESQIGDYYKDVGELG
SVQGVCLPQRGLVAGDREAGEQSGVVETRIVRLIEPLKERRRILLASKEMHQVAQDLEDE
ILWIQERLPLASCKDYGNNLQSVQQHVKKNQTLQRELTGRRARVEEVLDRAGIIASLRTP
EVECVREGAGHVRQLWEVLQLEAERRCVMLDAMLLSQQYYSDAAKVETWLSGQKLQLVNE
EKGTDEASTLQLLKGHLALEQTVENYAETVGMLTQQCQLLMEMGHPESEQLTKQQSHIDR
LYVSLKDMVEHRKNKLEQQYWLYQLNKDVEELEKWITERETVASSTELGHDLEDVTVLQE
RFTKFATETNSIGQQRMEHVNKMVNEMIDCGHSDAATIAEWKDGLNESWADLLELMETRR
QMLLASHQLHKFFTDCKEVLAQIAGKMKQLPEVRACQANITNPATLQRLMHSFEHALQLL
VAQVRQLQENAAQLRPSTAGEKAEAIMVKELEVMEAWKELLSSCEASRVQVTSVTDKVQF
FSVVRENLMWMEGIMGQIIWDEPRDLTALEVMMRQHQELKAKVDGRSKTIQQCADLGKIL
IAAGNPASEEIQEKLGSLLAKQRDLIEKWDKHQEKLLRRQEHFQFAQETVKAEAWLKAKE
PLITSKEPEGGGARTQTDEVEQLILRHEAFPQGLLSTWKERFSSLRQLSAHNSLIWLSSG
YLAQNYQSSGGLGSSGFLAQNNYSSGSLGSSSYLAQSGGIMDPKMAYAWQHLKADFMQPR
INHIHKAVNPLLEASRAQREQFGDIPMADMVGPESGLELLHGRLQRDPRGSRSDPQMDHL
RREREYKLGRQTSSEQEIQARLNELAADCXRQERYRRRLERQSSSEQEGSGKQRLQRQDS
SDLEGSIKDGSDKRSGDKRNTMAEIVEQVQEREAASARGDSYRPASSLSAPVTRFDGRPR
ARDRPKPRRRPRPKEPEETRRSRSAPATGAPTTPQPPSHTAHNEGFLYRKKASSSDLEAQ
QRSPNSKSWLNVYCVLKEGQLLFYKDARHLTTTYNEEPPVELANCTFDPSMGYKKKKNVF
ILQMADGNNFAFHAKDEEDMKAWTSNITTCISEYEELGKWDKPGTSSMEPDHSERKEKSE
GDADARSERSELAEAEERSEKERSEKGDGSEKLDTSEIADKMEGGAGGSSTSGKSK
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcaaaagcttcacaggaagtggcctgaagcaccaggcctttatggcggaactg
gcccgcaataaggaatggatcgccaagatagaaacagtgtttactaaaagaacaagactt
tcacagcgccggtaccgcatccgccggtaccgcatccgccgccgcaaacacccactgttg
cgagtctccggctgtaacagtccactaccgcccccgaggacccaggagggtcaggaactg
atccaggagaagcccgagctgcggtcggtggtccagcagaagctggtggagatcagagag
tgctggtccgacctggagagcaccaccaaggccaaggctcgccagctctttgagaacaac
aagcctgagccggcggtgaagagcttctcggacctggacagccagctctcccacctggag
cagcagcccccccagctggagcaggctcaccatctgcccaccttcaatgagcagctccag
aaattccaggctatggagtctcagataggggactattacaaggatgtgggagagctgggc
agcgtgcagggtgtctgcctgccccagcgaggcctggtggcaggtgacagggaggccggc
gagcagtcaggcgtcgtggagactcgcatcgtccgcctcatcgagccgctgaaggagaga
cgccgcatcctgctggcctccaaagagatgcatcaagtcgcccaagacctggaggatgag
atactgtggatccaggagaggcttcccttggcctcctgtaaggactatgggaacaacctc
cagagtgtacagcagcatgtgaagaagaaccagacccttcaaagggagctgacagggcgg
cgggctcgtgtggaggaggttctggaccgggcggggatcatcgcttcgctgaggacccct
gaggtggagtgtgtccgtgaaggggcggggcatgtgcgccagctgtgggaggtgttgcag
ctggaggccgagaggaggtgtgtgatgctggacgccatgctgctgtctcagcagtactac
agcgacgcggctaaagtggagacctggctgtcgggtcagaagctccaactggtcaatgaa
gaaaaaggaacggacgaggcgagcaccctgcagctgctgaagggccacctggctctggag
caaacggtggaaaactatgcagagacagtaggcatgctcacccagcaatgccagcttctt
atggaaatgggacacccagaaagtgagcagctcaccaagcagcagtcgcacatagaccgg
ctgtacgtgtctctgaaggacatggtggagcacaggaagaacaagctggagcagcagtac
tggctctatcagctcaacaaggacgtggaggagctggagaagtggatcacggagcgagag
accgtggccagttccaccgagctgggccacgacctggaggacgtcacggtgcttcaggag
agattcaccaagtttgccacagaaaccaacagcatcgggcagcagcgcatggagcatgtc
aacaaaatggtgaacgagatgatcgactgcggccactcggacgcggccaccatcgccgag
tggaaggacgggctgaacgagtcgtgggccgacctgctggagctgatggagacccgcagg
cagatgctgctcgcctcgcaccagctgcacaagttcttcaccgactgcaaagaggtcttg
gctcagatcgcggggaagatgaagcagctgccagaggtgagggcgtgccaagccaacatc
accaatccagccaccctgcagaggctcatgcactcctttgagcatgcccttcaactgctg
gttgcacaggtgaggcagctgcaggagaacgcggcccagctgaggccatctacggctggg
gaaaaggcggaggccatcatggtcaaagagctggaagtgatggaggcctggaaggagctg
ctgagctcctgtgaggccagccgtgtgcaggtcacctcagtcacagacaaggtgcagttc
ttctccgtggtgcgtgaaaacctcatgtggatggaaggcatcatgggccagattatatgg
gatgagcccagagatctgacggctctcgaggtgatgatgagacaacatcaggagctgaaa
gccaaagtagacggccgcagcaagaccatacagcagtgtgccgatctgggcaagatcctc
atagctgcaggcaaccctgcatccgaggagatacaagagaagctgggcagtcttctggct
aagcagagggatcttattgagaagtgggacaaacaccaggagaagttactgcgcaggcag
gaacatttccagttcgcccaggagacggtgaaggcagaagcctggctgaaggccaaggag
ccgctgatcacctccaaggagcccgagggaggaggagcccggacccaaacagacgaggtt
gagcaactcatccttcgccacgaggcctttccgcaaggcttgctgtccacctggaaagaa
cgcttcagctctctccgccagctttccgcacacaacagcctaatatggttgagttctgga
tacttagcgcagaattaccagagcagtgggggattgggtagctcaggctttctggcacaa
aataattacagcagtggaagtctgggcagttctagttacctggcgcaaagtggtggcatc
atggaccctaaaatggcatatgcatggcagcatctgaaagctgacttcatgcagcccagg
atcaaccacatccacaaggctgtaaaccccctcctagaggccagcagggcgcagcgggaa
cagtttggggacatcccaatggccgacatggtggggccagagtcggggctggagctcctc
cacggccgcctccagagggatccccgtggcagccgctcggatcctcagatggaccacctg
aggcgagagcgggagtacaagttgggtagacagacctccagcgaacaagagatccaggct
aggctgaacgagcttgccgctgattgtnngcgtcaggagcgctaccggaggcgcctggag
aggcagtcgtccagcgagcaggagggcagcggcaagcagaggctccagaggcaggactcg
agtgacctggagggctctattaaggacggttctgacaaacgctcaggggataagagaaat
accatggcagagattgttgaacaagtccaggagagagaggcagcatctgcacggggagat
tcttatcgccctgcaagcagcctctcagcaccggtgactcgttttgatggacgtcctcgg
gcccgagaccgccccaaaccgaggaggaggcctcgtcccaaagagcctgaggagacacgg
cgttctcgctcagctccagctactggggccccaaccacacctcagccgccttcgcacact
gcccacaacgaaggcttcctctaccgcaaaaaggcctcatcatctgacctcgaagctcag
cagagaagcccaaacagcaaatcctggctgaacgtgtactgtgtgttgaaagagggacag
ctgcttttctacaaggatgctaggcacctgactacgacatacaacgaggagcctcctgtg
gagctggctaactgcacctttgatccttctatgggatacaagaagaagaaaaatgtcttc
attcttcaaatggctgatggtaacaactttgcattccatgcaaaagatgaggaggacatg
aaggcttggacttcaaacatcaccacctgtatatctgaatacgaggaactgggcaagtgg
gacaagccgggaacctcgtccatggaacccgaccactcggagaggaaggagaagtcggag
ggggacgccgacgccaggtcagagaggtcggagctggccgaggcggaggagaggtccgag
aaggagaggtcagagaaaggggacggctctgagaagttagacacgtcagaaatcgccgac
aaaatggagggaggggcagggggctccagcacttctggaaagagcaaatga
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