Pseudochaenichthys georgianus (South Georgia icefish): 117458107
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Entry
117458107 CDS
T09629
Symbol
alcama
Name
(RefSeq) CD166 antigen homolog A
KO
K06547
activated leukocyte cell adhesion molecule
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117458107 (alcama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117458107 (alcama)
04090 CD molecules [BR:
pgeo04090
]
117458107 (alcama)
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
ALCAM
117458107 (alcama)
CD molecules [BR:
pgeo04090
]
Proteins
117458107 (alcama)
BRITE hierarchy
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
ig
I-set
V-set
C1-set
Ig_4
Syndecan
Motif
Other DBs
NCBI-GeneID:
117458107
NCBI-ProteinID:
XP_033954250
EnsemblRapid:
ENSPGEG00000015733
LinkDB
All DBs
Position
14:40229610..40339234
Genome browser
AA seq
562 aa
AA seq
DB search
MDSTAVLLLLTVTAGTLLHALGTESVTALYGETIVVPCNDGAPAPEDLMFVKWKYEKDDG
TPGDLLIQQARSSEATVQATDQYAPRVSIDQKLSLRITQASLRDQKTFTCMVVSGSNLME
YPVTVSVCKEPSSVQIMDRSAALQKDRATVVGTCVAADAHPAATITWKKNGKPLVADGKT
VLITPSMQLDPASGLSTTSSTLQYAASKEDNVSVFSCMSTHQLTNQEAELEPFPIHYPSE
KVSLQVVSKTPVVEGDNVTLKCHADGNPPPSSFVFHVKGHKVVGDADTYTLTSISREAEG
EYKCTLADDENMEASQTIVVSYLDLSLTPSGTVRKAIGDSFSVKVEQSSSAVAQVSWTKD
GQEVRQPEFSWLTYADAGVYVCELSMPGLTRHRSVELLVEGKPEITGLNKHRPDGASYKV
LTCEATGVPEPSFHWSVNSTNEESSYINGKATHTISVIPRQNLTVACSASNRLGDDTLTI
NVSSVFKEEKEEKGSKEESEDQSKLIVGGVAGLLIAAAVVGLVYWLYMKNSRQGSWKTGE
KEVGTSEESKKLEENQQFELQG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggactccaccgctgtgctgctgctgctcaccgtgaccgccggaactctgctccacgcg
ctggggacagagagtgtgactgccctgtacggagagaccattgttgtcccatgcaacgat
ggagctccagcaccagaggatctgatgttcgtcaagtggaaatacgaaaaagatgacggc
actcctggagacctgctgatccaacaggcccgcagtagtgaggccacggtccaggccacg
gaccagtatgccccgcgggtcagcatcgaccaaaagttgagcctgcgcatcacacaggcc
tcgctcagagaccagaagaccttcacctgcatggtggtgtccggctccaacctcatggag
taccccgtcaccgtcagcgtgtgcaaggagccgtcttcagttcagatcatggaccgctcg
gctgcgctgcagaaggacagagccactgtagtgggaacatgtgttgcagcagatgcacac
cctgcagctacgatcacgtggaaaaagaacggaaagcccttggtagccgatgggaaaact
gttctgatcactcccagcatgcagctggatccagcttcaggcctctccaccacctcctcc
accctccagtatgcagcttccaaagaggacaatgtctctgtcttctcttgcatgtccaca
caccagctgaccaatcaggaggctgagctggaaccctttcccattcactatccttcagag
aaggttagcctccaagttgtgtccaagacgccggtggtagagggagataacgtcacgttg
aagtgtcacgcggacggaaaccccccccccagctccttcgtcttccacgtgaagggccac
aaagtggtgggagatgcggacacctacacgctgacgtccatcagcagagaggcggagggg
gaatacaagtgcaccctggctgacgacgagaacatggaggcctcccaaaccattgttgtt
agctacctggacctgagtctgaccccctctgggaccgtgcggaaggcaataggggacagc
ttttctgtgaaggtggagcagagctcctcggctgtggctcaagtgtcgtggactaaggat
ggacaggaagtgaggcagccggagttcagctggctgacgtacgctgatgcaggagtgtat
gtgtgtgagctctccatgcccggcctcacgcggcaccgcagcgttgagctgttggtagaa
ggaaagccagaaatcacgggcctgaacaaacaccgccctgatggcgccagctacaaagtt
ctgacctgcgaggcaacgggagttccagaacccagcttccactggagcgtcaacagtacg
aacgaagagagctcttacatcaacggcaaggccacccatacaatcagtgtcatccccagg
cagaatctgaccgtcgcctgcagcgccagcaaccggctgggagacgacaccctgaccatc
aacgtttcctccgttttcaaggaggaaaaggaagaaaaaggatctaaggaggaatcggag
gaccagtccaagctcatagtggggggggtggcagggctcctcatagctgctgctgtggtg
ggactcgtctactggctctacatgaagaactccagacaaggaagctggaaaactggtgag
aaggaggtgggaacatcagaggagagcaagaagctggaggagaaccagcagtttgaactg
cagggctga
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