Pseudochaenichthys georgianus (South Georgia icefish): 117458166
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Entry
117458166 CDS
T09629
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00562
Inositol phosphate metabolism
pgeo01100
Metabolic pathways
pgeo04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
117458166 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
117458166 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117458166 (synj1)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
117458166 (synj1)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
117458166 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Herpes_pp85
Motif
Other DBs
NCBI-GeneID:
117458166
NCBI-ProteinID:
XP_033954337
LinkDB
All DBs
Position
14:complement(21259394..21290790)
Genome browser
AA seq
1657 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRGKEECLMFESGAVAVLSAAEKDAIKNTYAKIVDAY
GILGVLRLNLGDSMLHSLVVVTGCSSVGKVQDSEVFRVTQTDFISLKNDPADEDRIAEVR
KVLNSGHFYFAWSASGVSMDLSLSAHRRILEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACIFSRLSSERAGTRFNVRGANDDGQVANFVETEQVIFLD
DKVSSFIQIRGSIPLFWEQPGIQVGSHRVKLSRGFEANAPAFERHFTTLRRLYGKQVIIN
LLGSKEGEHMLSKAFQSHLKASEHVTAVKMVNFDYHQNVKGGKADKLHSVLKPYLSKFIE
ECGFFYYSAETGIARTQGGTLRTNCLDCLDRTNSVQAFFALEMLPKQLEEMGLTEKPQLV
ARFQEVFRTMWSANGDSVSKIYAGTGALDGKAKVGKLKDGARSVTRTIQNNFFDSSKQEA
IDILRLGSTLNSDLADKARALLTTSSLYVTEPILQSASPRVLLGMCQNYHKYTKPKQIRV
CVGTWNVNGGKQFRSIAFRNQTLNDWLLDAPKKAGHPDFQDSKANPPDIFAIGFEEMVEL
NAGNIVSASTTNQKLWAAELQKNLSRDHKYVLLASEQLVGVCLFVFIRPQHAPYIRDVAV
DTVKTGMGGATGNKGGVAIRMLFHTTSICVVCSHFAAGQSQVKERNDDYNEITRRLTFPM
GRLLYSHDYVFWCGDFNYRIGLPNEEVKELIKQQNWDALTAGDQLFDQKNAGLVFRGFIE
GKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRILWKRRKWNFDKTAEEMNVVGASTTSGE
NEDDPDNPWNPGTLKFYNRAELKTSDHRPVVSIIDVDILEVDPEARHQVYKEVIALQGPP
DGTILVSLCASGPDDYFSDELIDELLDKFTNFGDVILIRFVEEKMWVTFLEGYSALAALS
LSASTVLGKMIDIRLKSPGWIKNLEDEMSVERICGSIPTSASSTLLAEDTDMGDEDYDME
GDVDDEVEEILPQHLQPGAGSAPGSSPLPSPRGSPCPSPTHGEPPGPSRPSRGGPSRPTQ
GPPVDFQPGAPTSMESKRPPPPRPGAPPARPAPPQRPPPPSGPKSPALPRPEAATARGQV
AVGSTGPAGAPRPNIPPRAGVISIPPQSRQQPPSHPGAPRPITEVHPGAPRPIPDNHPGA
PRPALAKPTDLPLGIPPAEPQIARPQAPPPLQAPMQAPMQPHSAAPAAQSQIQAPMQAPM
QAPMQPTLQAPLQPQQAPKVGPPASSASAAAASAGSPQGLASPKPPPRSRSSQALPPEAA
KTEAAPAAQTNGLNGIQREAQWKPDPFAPLTSDLLPSSSPWHTTQSLNRGASLRAPPSVP
VSSNTLPLSFSLQSSALQPLDSSSSSSSSSTASPFSSSLLPPPPPSRSRSQETLWAPPGP
LLPDPLPARPSSTNPFTGPLAQRYQPSRPLTPDFSSVPTPNIQRTMSAFTQPLIAMSAPT
AAAPSSQLQKTTSLFGPSSAFNPTADPLLPLAPSPVPSLPLAPPSSLPPVLAPRRLPPPS
VGKPTKSWVTFDDDLDFQHPTKTPQAPVVPSSSLVGQTQTIPSRSVFDSEPDWLSSVPSV
FPTLPPPIPTRTVPSNPNLPEGLSDDCLFPTESWDHS
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaaaggatatcgcatttaccacaaactggacccacccccctacagtgtt
atagtggaaactagaggcaaagaagaatgcctcatgttcgaatcgggggccgttgctgtt
ctttctgcagcagagaaggatgccattaaaaacacatacgccaagattgttgatgcctat
ggcatcctgggcgtcctccgcctaaacctgggtgactccatgctccacagtctggtggtt
gtgacaggatgcagctctgtggggaaggtgcaggattctgaggttttcagggtcacacag
acagactttatatcgctgaagaatgatccagcggatgaggaccggattgctgaagtgcga
aaggtcctgaactcaggacacttctactttgcctggtctgcctctggagttagcatggac
ctgagtctaagtgcacatcgcaggatcctagaggacacaacagataaccgcttcttttgg
aaccaatctctgcacctgcacctgaaacactacggagtaaactgcgatgactggctgttg
aggctgatgtgtggcggtgtggagatcaggaccatctacgcagggcacaaacaggccaag
gcgtgcatcttctcccgcctcagctcagagcgagcgggcaccagattcaacgtccgagga
gccaatgacgacggacaggtggccaactttgtggagacggaacaggttattttcctggat
gacaaagtatcatccttcatacagatccgtgggtccattcctcttttctgggaacagcca
ggaattcaggtcggctctcatcgtgtcaagctgtctagaggatttgaggcaaatgcgccc
gcattcgaaagacacttcaccacactgcgaaggttgtatggcaaacaggtgatcatcaac
ctgcttgggagtaaggaaggggaacacatgctcagcaaagcttttcagagtcacctgaag
gcatcagagcatgtaacagcggtgaaaatggtgaacttcgactaccatcaaaatgtgaag
gggggaaaggccgacaaactgcacagtgtcctgaaaccctacctcagcaagttcatagag
gagtgtggcttcttctactactctgcagagacgggcattgcaagaactcaaggtgggacc
ctaaggacaaactgcctggactgtctggacagaaccaacagtgttcaggctttctttgcc
cttgagatgctaccaaagcagctggaggaaatggggctgacagagaaaccccagctggtg
gccaggttccaggaggttttcaggaccatgtggtctgcaaacggcgactccgtcagtaag
atctacgcgggcaccggtgctctggatggcaaggccaaggttggaaagctaaaagatggc
gctcgttctgtgacgaggaccatccagaacaacttcttcgacagctctaagcaggaggcc
atagacatcctgaggctgggctccacactcaacagcgatctggcggacaaagctcgagcc
ttgctcaccacttccagtctttatgtcactgagcccatcttgcaatcagcctctccaaga
gtactgctgggaatgtgtcagaactaccataaatacacgaagcccaagcagatccgcgtg
tgtgtcggcacctggaatgttaacgggggtaaacagtttcgcagcattgctttccgaaac
cagacgctcaacgactggctgttggatgctccaaagaaggcaggccatcctgatttccag
gacagcaaagccaaccccccagatatctttgccattggctttgaggaaatggttgaactg
aatgctggaaacattgtcagtgcgagcactacgaaccagaaactctgggcagctgagcta
caaaaaaacttatcacgggaccacaagtatgtgttgctggcttcagagcagctggtggga
gtctgtctgtttgttttcatccgcccacagcacgcaccctacatcagggatgttgctgtg
gatactgtaaaaactgggatgggcggggctacagggaataaaggaggtgtggccatccgc
atgctcttccacaccaccagcatctgcgtcgtctgctcccactttgctgctggccagtca
caggtcaaggagagaaatgacgactacaatgagatcacgcgcaggctgactttccccatg
ggtcgtctgctgtactcgcatgactacgttttctggtgcggagacttcaactatcgaatc
ggcctgcccaatgaggaagtgaaagagctcatcaaacagcagaactgggatgccttgaca
gctggggatcagttgtttgaccagaaaaatgctggtttggttttccgtggttttatcgag
ggcaagttagattttgctcccacctataagtatgacctcttctcagaagactatgacacc
agtgagaagtgccgcacaccggcctggaccgaccgcatactctggaagaggaggaagtgg
aacttcgacaaaacagctgaggagatgaatgtagtaggagccagtactacgtctggggag
aacgaggacgatccggacaacccctggaaccctgggacgctgaagttctacaacagggct
gagcttaagacctcagaccacaggcccgtggtgtcgatcatagacgtggacatcctggag
gtggaccccgaggcgcggcaccaggtctacaaagaggtcatcgccctgcaggggccccca
gacgggaccatcctggtgtcactctgcgcctccggccccgacgattacttcagcgatgag
ctcatagacgagctgctggacaagtttactaactttggggacgtcatcctcatcaggttt
gtggaggagaagatgtgggtgactttcctggaaggttactctgctcttgctgctctttct
ctcagcgcctccactgtcctcggcaagatgatcgacatccgtcttaagagtccaggctgg
atcaagaatcttgaggacgagatgagcgtggagaggatctgtggaagcatccccacctca
gcgagctccacgctgctcgctgaagacacggacatgggcgatgaggattacgatatggaa
ggtgatgtggacgatgaggtggaggagatccttccccagcaccttcagcctggagcaggg
tccgcccctgggtcctctcccctcccctccccccgcggcagtccctgtccctcccccacc
cacggagaacctcccggccccagcaggccgagtcgtggaggaccctcccgaccaacacag
gggcctcctgttgacttccagcccggtgcccctacatctatggagtccaaacgcccaccg
ccccctcggcccggcgcccccccagccaggccagcaccccctcaacgcccaccgccacct
tcaggaccaaaaagccccgctcttcctcggcctgaggccgctacagcgcgaggccaggta
gcagtggggtctactggacctgcaggtgctcccagaccaaatatccctcctcgagccggg
gtgatcagcataccccctcagtctcgccaacaacctccctctcaccctggagcccccagg
cccatcacagaggtgcatcctggggcccctcgacccatcccagacaaccaccccggggcc
ccgcgacctgctctggccaaacccacggacctgcctctgggtattcctccagcagagccc
cagatagcgagaccccaggctccgcctcccctgcaggcccccatgcaggcccccatgcag
ccccattcagcggcccctgcagctcagtcccagatccaggcccccatgcaggcccccatg
caggcccccatgcagcccacccttcaagctccactccagccacagcaggctcctaaagtc
gggccccctgcttcctctgcttctgctgctgctgcctccgcagggtctccgcagggcctc
gcctctcccaaaccccccccacgctcccgctcctctcaagctctgccacctgaggctgcc
aagactgaagcagccccagctgcccagacgaatggactgaatggaatccaaagagaagca
caatggaagccggaccccttcgccccactcacctctgatttactcccctcctcctccccc
tggcacaccacccagtccctgaacagaggcgcctctctgcgtgcccccccctctgttcct
gtatcctccaacactctccctctatccttctccctccagtcctccgccctgcagccactc
gactcttcctcctcctcctcctcttcttccaccgcgtcccctttctcctcctccctgctc
ccgcctcctcctccgtctcgtagccgctctcaggagacgctgtgggccccccccggcccc
ctccttcccgacccgctccccgcccggcccagcagcaccaaccccttcacgggccctctg
gcgcagcggtatcagcccagccgcccgctcaccccggacttcagctccgtcccgacgcca
aacattcagaggaccatgtctgcgttcactcagcccctcatcgccatgtctgctccaaca
gcagcggccccctcctcccagctccagaagaccacgtccctgtttggaccgtcgtcggct
ttcaaccccacagctgaccctctgctccccctcgccccgtctcctgtcccctccttgcct
ctggctcctccctcctcccttccccctgtcctcgcacctcgtcgcctgccacccccctcg
gtaggtaaacccacaaagagttgggtcacttttgatgatgatttggattttcaacatcca
accaaaacgccacaggcccccgtcgtcccttccagttccctcgtgggacaaacacagact
atcccctcccgctctgtgtttgactcggagcccgactggttatcctcggtcccttcagta
ttcccaacgctccctcctcccatcccgaccagaactgtacccagcaacccaaacctccca
gagggtctgagcgacgactgcttgttcccaacagaaagctgggatcactcttaa
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