Pseudochaenichthys georgianus (South Georgia icefish): 117458222
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Entry
117458222 CDS
T09629
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117458222 (med13a)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117458222 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
117458222
NCBI-ProteinID:
XP_033954450
LinkDB
All DBs
Position
14:complement(26020591..26122892)
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AA seq
2151 aa
AA seq
DB search
MSSCYVPNGASLEDCHSNLFCLADLTGIKWKRFVWQGPTSAPILSPVTEEDPILCSFSRC
LKADILSVWRRSQRPGRRELWLFWWGDDPNFADLIHHELAGEDVGLWENGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCAFTFFLHGESNVCTSVEI
NQHQPVYHLTEEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKMSDPPTQKLIEEWNQFY
PISPSAKGGSSSDKAEDMDWEDDSLASVEVLVGGVRMVYPACLVLVPQSDIPVVAPVGSS
HCTAVYPGGHQVPASQREPAMSLVTLTPPTSPEEAQTVDSHSAQKWVKMPSTSDAFSVDK
TSHHGGKIPRRLSTQVVERVWQECNINRAQNKRKFSAATNGTCDEELSEKAAAWDFVEHS
QRSYCSCSRYKSMKQRTGSTPGQTPTTVQPSQTPTKHKAGGEKPEKGDKQQKRPQTPFHH
RSMTMDDASMEAEATAGQRIAMRGQDGGRFNSMRSTDVSGIQKNTQLHCGGVNVGQSEQS
NSPQPPPLSPHPCEESGEGMKNPSTPNSQHFYQPPSEPCLGGGKGGGEDPGGPEGLNQHF
HSHHPHHGASNYSDPLEPTMYLGAGVDPEEDSSLAPWRLFNLPRTKEAELPKPLLPWDKL
REEAAAQENLVSVTEVMSTTKWPLKVSEERLQMYRARRNQYLSAVITDHEPDVDPYAFEE
EDVKFTFSHKKDKAGGEPGKKHKGEDGGSSSSDEAQRAAAHNRMASTSLIHETDLAVSIN
DLEHLFNSDEDELAPGSRRTVNGTDDKFGSKESKSSTLDPVSCISSADMHQMFPTPPSLE
QHIMGYSPMNMCSKEYGSMEANMGMTSLDGTSSLGHFKIEVEESYCSPKPSEITDYSFVY
KPELCQSFVGCSMFAPLKMLPSQCLPPIKIPEDCIYRLSWREMLNPVMPVMSFLNKDSNI
PSVGSTMDQDYSQTYTPQTHTPFMSNSAPPSNSGTGILPSPTTPRFSAPTPRTPRTPRTP
RGPASVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVTLILSESVMSL
FKDCNFDSCCICVCNMNIKGADVGVYLSDPIGEAQEACSCGFSAVVNRRYGNGSGLFLED
ELDIIGRGSDVSREAEKRFEQLRLSSLERTGVGRGDRVPDELILLLQDQCTNPFSPISVL
DDDIVTRGPSGAPVPPCVRVEERDYHSDCYMALEHGRQFMDNMSGGKVDEALVKSTCLHH
WAKQNAVDVSALCSQDVLRVLMSLQPVLQDAIQKKRTIRSWGVQGPLTWQQFHKMAGRGS
YGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDVGYLVVCPDNEAL
LSGAKSFFRDLTAVYESCRLGQHRPISKGYPDGIVLVGGSGAKNLVDQPVSDWFLKAASS
NSDAFTKLKLYAQVCRHNLAPYLASQPLDSSLLTQSSPPPSSNQSSSTQQSSSTSGSLGQ
QCPVNSAGSSVPNNNNSTNNSGSGNGPASSNSLVTSSGQPPAKPSSFPPFGNMGPQGQGG
EQLGQQAGTQNTGTSGDNSSSQAPGPTEPLESTLEREKIGVPTDGESHAITYPPAIVVYI
VDPFSYEETDGGPGPVPSHSSVWTLGLLRCYLEMLQFLPPHIRNSISVQIVPCQYLLQPV
RGEDRHIYAQHLKSLAFSVFAQCRRPLPISTNVKSLTGFGPGLAIDTALKSPERPEFLRL
YTPPFILAPTKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTDLYGELLETCI
INIDVPNRARRKKGSVRRLGLQKLWDWCLGLVQMTSVPWRVVIGRLGRIGHGELKDWSIL
LSRRNLQSLSRRLKEMCRMCGISASDTPSILSVCLVAMEPQGSFIIMPDSVSTGSVFGRS
TTLNMQTSQLSTPQDTSCTHILVFPTSAFVQVASSNYTNIDPNIDILNANPDGPDAIGIF
DLLDQENEFVDPDIINISPNTSPVHSPGSHYHHGGDGSKGQSTDRMESHEEVPNLLQQPL
ALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVSSVQSDELLHSKHSHPLDS
NQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPINFVVLNQMYNFIMNML
NT seq
6456 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttatgtaccaaacggggccagcttggaggattgccattccaatctattc
tgtctggctgacttgacagggatcaaatggaagaggtttgtgtggcagggtcccacctct
gctcccatcctctctccagtcacggaggaggaccccatcctgtgcagcttcagccgctgc
ctgaaggcagacatactgagcgtatggcggcgcagtcagcggccggggcggagggagctc
tggctcttctggtggggggacgacccaaacttcgccgatctcatccaccatgagcttgca
ggcgaggatgttgggttgtgggagaacgggctttcctacgagtgtcgcacgctgctgttc
aaagccatccacaacctgctggagcgctgcctcatgaatcgcagcttcgttcggatcggg
aagtggtttgtcaaaccctacgagaaggacgagaagcccatcaacaaaagtgagcaccta
tcctgcgccttcaccttctttttgcacggggagagcaacgtgtgcaccagtgtggagatc
aaccagcaccagcccgtctaccacctgacggaggagcacctcaccctggctcagcaggca
tccagccccttccaagttatcctgagtcctttcggcctgaacgggaccctgacgggccag
tcgttcaagatgtcagacccgcccacccagaagctgatcgaggagtggaaccagttctat
cccatcagccccagcgccaagggggggtcgtcgtcggataaggcggaggacatggactgg
gaggatgactctctggcctccgtagaggtcctcgtaggtggtgtgcgaatggtttaccca
gcatgcttagtgctggttccccagtcagacatccctgttgtggcccctgtggggtcctcc
cactgcactgccgtctacccgggtggccaccaggtgcctgcttcccagcgagagcccgcc
atgtctttggtgaccctcacccctcccacatcgcctgaggaggctcagacagtggactct
cactcggcccagaagtgggttaagatgccttcaacatctgatgcgttcagcgtggacaaa
acaagtcaccacggaggaaagattccacgccggttatccacccaggtggtggagcgcgtc
tggcaagagtgcaatatcaaccgagcccagaacaaacggaagttctcagccgcaaccaac
ggtacctgtgacgaagagctgagtgagaaagcggcagcctgggattttgtggagcattca
cagaggtcctactgcagctgttccagatacaaatcaatgaagcagcgaacaggcagtacc
ccaggccaaacacctacaacggtccagccctcccagactcccaccaagcacaaagctggg
ggggagaagccagagaaaggtgacaagcagcagaaaagaccccagacgcccttccatcat
cgcagcatgaccatggacgacgcttccatggaggctgaggccaccgccggtcagaggata
gccatgagaggccaggacggagggagattcaatagtatgcgctctacggatgtgtctggc
atccaaaaaaacacccagctccattgtgggggggtcaacgtagggcagtcagaacagtcc
aactccccgcaaccgccacctcttagcccccacccctgcgaggaatcaggggagggcatg
aagaacccttcaacccccaacagccaacacttttaccagcctccgtcggaaccctgcctc
ggcggggggaagggcggcggcgaggatcccggagggcccgagggtctaaatcagcacttc
cactcccatcacccccaccacggagcctcgaactactccgacccccttgagcccaccatg
tatttgggcgcaggggtcgacccggaggaggacagctccctcgcaccatggaggctattc
aacctcccccgcacgaaagaagccgagctgcccaagccactactgccctgggacaagctg
agggaggaggccgcggcacaggaaaacctggtgtcagtcacagaggtgatgtctacgacc
aaatggccgctgaaggtgtctgaagaacgccttcagatgtaccgagccaggaggaaccag
tacctatcggctgtcatcacagaccacgagccagatgttgacccctacgccttcgaggaa
gaagatgtcaagttcacgttctctcacaagaaggataaggcaggcggggagccaggaaag
aaacataagggtgaagatggaggatctagttcgtcagatgaagctcagcgggcggctgct
cacaaccgcatggcttccaccagcctgatccacgagaccgacctggcggtgtccatcaac
gacctggaacacctcttcaattcagacgaggatgaactggcgcctggctccaggcgaacg
gtgaatggaacggatgataaatttggcagcaaggaatctaagtcctccactctggatccc
gtgtcctgcattagttcagcagacatgcatcagatgtttcccacacccccctccctcgag
cagcacatcatgggctactcacccatgaacatgtgcagcaaggagtacggcagcatggag
gccaacatgggcatgacctcgcttgacggcacctcgtctctgggacacttcaagatcgag
gtggaagagagctactgcagtcccaagccatctgagatcacggactattcattcgtttac
aagcccgagctgtgccagtcgttcgtaggctgctccatgttcgctcctctgaagatgtta
cccagccagtgtctcccacctatcaaaatcccagaggactgcatctacagactgagctgg
agggagatgctcaaccccgtcatgcctgtcatgagcttcctcaacaaggacagtaacatc
cccagtgtgggcagcaccatggaccaggactacagccagacctacacccctcagactcac
acgcctttcatgtctaacagtgcaccaccaagtaacagtggcactggcatcctgccttca
cccaccacccctcgtttctctgcccccaccccacgaacgccacgcaccccacgaacacct
cgaggccctgccagcgtccagggctcactcaagtacgagaactcagacctttactcccca
gcgtccaccccctccacctgtcgaccgctgaactcagtagagccagccacggtgccctcc
atccccgaggcccacagcctctacgtcaccctcatcctctccgagtcagtcatgagcctc
ttcaaggattgcaacttcgacagctgctgcatctgtgtgtgtaacatgaacataaaagga
gccgacgtgggcgtgtacctcagcgaccccatcggcgaggctcaggaagcgtgcagctgt
ggcttcagcgccgtggtcaacaggcgctacggcaacggctcgggcctcttcctggaggac
gagctggacatcatcggccgaggctcagacgtcagcagggaggcagagaagcgcttcgag
cagctgcggctctcctcgctggaaagaactggagtagggaggggcgaccgtgtcccagac
gagctcatcctcctcctgcaggatcaatgcaccaaccccttttcacccatatcagtcctg
gacgatgacatagtgacgcgggggccaagcggggcccctgtgccgccctgtgtgagggtg
gaggagagggactaccacagcgactgctacatggccctggagcacggcaggcagttcatg
gacaacatgtcgggaggcaaggtggacgaggcgctggtgaagagcacctgcctgcaccac
tgggccaaacaaaacgcagtggacgtcagtgcgctgtgctctcaggatgtgctgcgggtg
ctcatgtccctgcagcccgtgctccaggacgcaatccagaagaagaggacgataaggtcg
tggggcgttcagggtcccctcacctggcagcagttccacaagatggctggacggggctct
tacggcacagacgagtccccggagcccctgcccatccccaccttcctggtggggtatgag
tacgactttgtggtgctgtctcccttcggtctgccctactgggagaagctgttgttggat
ccctttggctcgcagcgggacgttgggtacctggtggtctgtcctgacaacgaggccttg
ctcagcggcgccaagagcttcttcagggacctcaccgctgtctacgagtcatgtcggctg
ggccagcaccggcccatttccaaaggctaccccgatggcatcgtccttgttggcggcagc
ggagccaagaaccttgtggatcagccggtcagcgattggttcctcaaggctgccagcagc
aacagcgacgccttcactaagctcaaactctatgcacaagtgtgccgacacaacctcgct
ccatacctcgcctcacagccattggacagttccctcctcacacagtccagccccccgccc
tcgtccaaccagtcgtcatccacacaacagtccagctccacatcaggctcattgggccag
cagtgccccgtgaactctgcaggctcctcagttcccaataacaacaacagcactaacaac
agtgggtctggaaacggccccgcgtcctccaacagtctggtcacatcctcaggccagccg
cctgccaagcccagctctttccccccctttgggaacatgggcccccagggccaggggggg
gaacagctgggacagcaggctggtacccagaatactggcacctcaggggacaactccagc
agccaggccccggggccaacagagcctcttgaaagcactttggaacgagagaaaataggc
gttcccacggacggggagtcccacgccatcacgtatccacctgccatcgttgtttacatt
gtggaccccttcagctacgaggagacggacgggggcccggggccggtgccgtcccactcc
agtgtgtggacgctgggtttactacgctgctaccttgagatgcttcagttcctgccccca
cacatccgcaattctatttcagtacagattgtcccctgccagtacctgcttcagccagtt
cgtggagaggatcgtcacatctacgcccagcacctcaagtctctcgccttctccgtcttc
gctcagtgcagacggccactgcccatctccaccaacgtcaagtcactgacgggctttggc
ccaggcctggctatcgacactgcactgaagagcccagagaggccggagtttctgcgactc
tatacacctccgttcattctagcaccaacaaaggacaagcagacggagctcggggagaca
tttggggaggcatcgcagaaatacaacgtgctttttgtgggatactgtctgtcccacgac
caacgctggctcctggctacatgcactgacctgtatggggaactcctagaaacctgcatc
atcaacatcgatgttcccaacagggcgaggaggaaaaaagggtctgttcggaggctgggc
ctgcagaagctgtgggattggtgcttgggactggtgcagatgacatcagtcccctggagg
gtggtgattggtcgactgggcaggataggacacggagagttaaaagactggagtattctg
ctgagcagaaggaacctccagtccctgagtcgccgtctgaaggaaatgtgtcgaatgtgt
ggcatctcagcctcagatactcccagcatcctcagcgtttgcttagttgccatggagccc
cagggatcatttatcatcatgccagactcggtgtcgacaggctcagtgtttggccgcagc
accaccttaaacatgcagacgtcccagctgagcaccccccaggacacctcttgcacccac
atcctcgtcttccccacatccgccttcgtccaagtggccagctccaattacaccaacatc
gaccccaacattgacatcctaaacgccaaccctgatgggcctgatgctatcgggatcttt
gacctgctggatcaggagaatgagttcgtggacccggacatcatcaacatctcgcccaac
acatcaccagttcactcccccggctctcattaccatcacgggggtgatggcagtaagggc
cagagtacagaccgtatggagtctcatgaagaagttcctaaccttctgcagcagcccctg
gcacttggctactttgtctccacggctaaagccggccccctacctgactggttctggtca
gcctgtccgcaagcccagaaccagtgtccactcttcctcaaggcctctttgcacctccat
gtgtcttcagtgcaatcagatgaactactgcacagcaaacactcccaccccctcgactcc
aatcagacctcagatgtactcagatttgtgctggagcagtacaacgccctctcctggctg
acgtgtgacccggccacgcaggaccgacgatcatgtctacccattaactttgtggtgctc
aaccagatgtacaacttcatcatgaacatgttgtag
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integrated database retrieval system
