Pseudochaenichthys georgianus (South Georgia icefish): 117458235
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Entry
117458235 CDS
T09629
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117458235
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117458235
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GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117458235
NCBI-ProteinID:
XP_033954472
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Position
14:complement(39465576..39496752)
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AA seq
865 aa
AA seq
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MKGGGRGKEPPVAGEVAGKRPKRKCLQWHPLLSKKALDFSEEEEEEDEEELEKPVLCGQQ
PGSQVQCGSKAEEVEEDSNEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADW
WAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPATSKPVKSPSAPPVSNPRKKVWSFSS
NSTKDPPTAKKVPKTDSMPQLNFAMADPTKMGGLSMLLLAGEHALTNREPQYCVPLQIPS
STKPRSPDAASEGNSFPGDKQQVLSGTVPSRVPDSTGGSVQSAPPQLAEPSVSAPEGKPC
PQSALFQLAEMCLASEAGHMDPVGSQPEVCPPTATPLLTEIKEERADWDDGPPPPQISLL
PLLSSDAIPPQCSSQNARVKTKSTKKEMAKSNDNVEIPSPAKRILKKCNHAESNVDSVFS
TIEAVAKGVWKDTEETPKKKIQGSPSAGNSAVLKKKNKPKVKTFVQEKEEEMEEDSGQCG
QSSSPEVAMKEEMADVCPKQDAEEDSLGSTDLQSSMEEALHSPCSPSPSKLREEDKGKER
SGEGNCDSTAEHHGSRKSERSCKGALYKTLVSEGMLTSLRANIDRGKRGALRASDHDANW
SDDSWSVSQTGPNNPKKLKKSKSKDESSQGLGKLEEEFERKFNSLPQYSPMTFDKKGTTV
VKKKKTDSASVQEEVSKAAKGSSPSQKKTSFHKIVRKQKHKKEKPGAVDKGAPSDSTMLD
SAAKAKPCAPVATVCPDVQGTNSMEMLVGSQKRKARKTKITHLVRTADGSVSPAEEDKMW
DQNHEEDKKPLPQQILCNVKGCYSNPRAQEAERSAAAPELPAFFSLAALAEVAAMENVHR
GQRGLAENQKKELSQTPVLVSCADQ
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggaggaaggggtaaggagccacctgttgcaggagaggtcgctggcaagcgt
cccaaacgtaaatgtctgcagtggcacccacttctctccaaaaaggctctggatttctct
gaggaggaagaagaggaggatgaagaagagctggagaagccggtgctgtgtggccagcag
ccggggtcacaggtgcagtgtgggagcaaagcagaggaggtggaggaggactccaatgaa
cagcgggctcggcggccaatgaatgccttccttctcttctgcaaacgccaccgctccctg
gtgcggcaggaacatccccgcttggataaccgcggggccaccaagatcctggccgactgg
tgggctgttctggagcccaaagagaagcagaaatacaccgacatggccaaggagtacaag
gatgcctttatgaaggcaaacccgggctacaagtggtgtcccgccaccagcaagccagtg
aagagcccctctgctcccccggtcagcaacccccgcaaaaaagtgtggtccttctcttcc
aactcaaccaaggacccccccactgccaaaaaagtgcccaaaactgatagcatgccacag
ttaaactttgccatggcagaccctacgaagatgggaggcctaagcatgctgctgttagcg
ggggaacatgccctcacaaacagagagccccagtattgtgttccactgcagatcccttcc
agcactaagcccaggtcacctgacgcagccagcgaagggaactcctttccaggggacaag
caacaggtgttgtctgggacagtaccaagcagagtgcctgacagtactggaggcagtgtt
cagtctgcccccccccagctggcagaaccgtctgtctctgctcctgaagggaagccctgc
ccacagtctgctctgttccagctcgccgagatgtgcttagcctctgaagctggacacatg
gacccagtggggtctcagcctgaggtctgcccccccacagccacccctctgctaactgag
atcaaggaggagagagccgactgggacgacggtccccccccccctcagatatcacttcta
cctttgctctcctctgatgccattcccccacaatgcagcagccaaaatgcacgtgtcaaa
accaagagcacgaaaaaagagatggccaagtcaaatgataatgttgagataccttcccca
gcaaagagaatcctcaagaagtgtaaccatgcagagtcaaacgtggacagtgtcttcagt
acaattgaggcagtggccaaaggggtctggaaggacacagaggagacccccaagaagaag
atccagggaagtcctagtgctggtaactcagctgtgctcaaaaagaagaataagcccaaa
gtcaagacctttgttcaagaaaaagaggaggagatggaggaagacagcgggcagtgtggg
cagagctcttctcctgaggtagcaatgaaggaagagatggccgacgtctgtcccaaacaa
gacgctgaagaagatagtttaggaagcacggatcttcagagcagcatggaagaagccctg
cactccccctgcagcccctcaccttctaagctaagagaggaagacaaggggaaggagagg
tcgggtgaagggaactgcgactccaccgcagagcaccacggctccaggaaatcagagcgg
agctgcaaaggcgccttgtacaagacgctggtttctgaaggaatgctgacttccctgaga
gccaacatcgaccgaggtaagcgcggtgcgttacgtgcttctgatcatgacgccaactgg
agtgacgacagctggtcagtttctcagacgggacctaataatcccaaaaagctgaaaaag
tccaagtccaaagatgagagttctcaaggcctggggaaactggaggaggagtttgaaagg
aagtttaacagcctgccacagtatagcccaatgacatttgataagaaggggacgactgtc
gtaaagaagaagaagactgacagcgccagcgtccaagaggaagtctctaaagccgcgaaa
ggatcatctccatctcagaaaaagacttcattccacaagattgttaggaagcaaaaacac
aaaaaggagaaaccaggtgcagtggacaaaggggcaccgagtgattccaccatgctggat
tcagctgcaaaagccaagccatgtgcccccgttgccacagtgtgcccggatgtccagggg
accaatagtatggagatgcttgttggtagccagaagaggaaggcaagaaagaccaagatc
acacacttggtgcgcacagctgatggcagtgtgtctcctgctgaggaggacaaaatgtgg
gaccagaaccacgaagaggataagaagccattaccccaacagattttatgcaatgtcaag
ggttgctacagtaaccccagagcacaggaggcggagaggagcgctgcagctcccgagctg
cctgctttcttcagcctggcagccctggctgaggtagcagccatggaaaatgttcacaga
ggccagagaggcttggctgagaaccagaagaaagagcttagccagactccagtcctcgtc
tcctgcgccgaccagtga
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