Pseudochaenichthys georgianus (South Georgia icefish): 117458283
Help
Entry
117458283 CDS
T09629
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc)
KO
K04646
clathrin heavy chain
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04142
Lysosome
pgeo04144
Endocytosis
pgeo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117458283 (cltca)
04142 Lysosome
117458283 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117458283 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117458283 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117458283 (cltca)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
117458283 (cltca)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Proteins found in most exosomes
117458283 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
117458283
NCBI-ProteinID:
XP_071061641
LinkDB
All DBs
Position
14:complement(26410089..26441518)
Genome browser
AA seq
1678 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQSQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKASKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAGG
EELFARKFNNLFAAGTYSEAAKVAANAPKGILRTPDTIRRFQGVPTQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRPHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDAEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPDLWASVL
LETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRAYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYMRSVQSHNNKSVNEALNNLFITEEDYLALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDVELAEELLSWFLQE
DKKECFAACLFSCYDLLRPDVVMETAWRHNLMDFSMPYFIQVMREYLSKVDKLETSETVR
KEEEQATETQPIVYGTPQLMLTAGPTVPVAPQQPYGYGYQAPAGFAPPAAQPGFGYGM
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgcctattcgctttcaggagcacctgcagctccaaaatttagggatc
aatccggccaacataggcttcagcaccctgaccatggagtcggataagttcatctgtatc
cgggagaaagtgggcgagcagtctcaggtggtgatcatcgacatggcagaccccaacacc
cccatccgcaggcccatctccgccgacagcgccattatgaatccagccagcaaagtcatt
gcacttaaagcctccaaaacccttcagatcttcaacatcgagatgaagagcaagatgaag
gcgcacaccatgacggacgatgttaccttctggaagtggatctcccttaacacagtcgca
cttgtgactgataatgccgtctaccactggagcatggagggcgactcacagcctgtgaaa
gtcttcgaccgccactccagcctggcaggctgtcagatcatcaactaccgcacggacgcc
aagcagaaatggctcctgctcatcggcatctcagcccagcaaaatcgggttgttggagcc
atgcagctctactccgttgacagaaaggtttcccagcccatcgaaggccatgctgccagc
tttgcccagttcaagatggaggggaacacagaggagtcaaccttgttctgcttcgctgtc
cgaggccaggctggaggaaagttgcacatcattgaagtggggaccccaccaactggcaac
cagccatttccaaagaaagcagtggatgtgttcttccctccagaagcccagaacgacttc
cctgtggccatgcagataagctccaagcaagatgtggttttcctcattaccaaatatggc
tacattcacttgtatgacttggagacgggtacctgcatctacatgaaccgcatcagcggg
gagaccatctttgtgactgctccacatgaggccaccgcaggaatcatcggggtcaacagg
aagggacaggtgctctcagtgtgtgtggaagaggaaaacatcatcccctacatcactaac
gtgctccagaatccagatctggctctccgcttggctgtccgcaacaacctcgctggtgga
gaagagctctttgcgcgcaagttcaacaacctgtttgctgccggtacctactctgaggct
gccaaggtcgctgcaaacgcaccaaagggtatcctgcggaccccagacaccatacgtcgc
tttcagggcgttcccacccagccggggcagacctcccccctgctgcagtacttcggcatc
ctgttggaccagggccagctcaacaagtttgagtccctggagctctgcaggccggtcctc
cagcaggggcgcaagcagctcctggagaagtggctgaaggaagacaagttggaatgctcg
gaggagctgggtgacctggtgaaggcagtggatcccacgttggctctcagtgtctacctg
agggccaacgtccccaacaaagtcatccagtgcttcgcagagactggtcagttccccaag
atcgtcctgtacgccaagaaggtgggctacactccagactggatctttctgctcaggaat
gtgatgcggatcaacccagaacaaggcctgcagtttgcccagatgctagttcaggatgag
gagccgctggccgacatcacacagattgtggatgtcttcatggagtacaacctgatccag
cagtgcacctcgttcctcctggacgctctgaagaacaacagaccctcagaaggaccgctg
cagactcgcctgctggagatgaacctcatgcatgctccacaggttgctgatgctatcctg
ggcaaccagatgttcaccaactatgatcgtccacacatcgcccagctgtgtgagaaggct
ggactccttcaaagagcgctggagcactacaccgacctgtacgacatcaagcgtgccgtg
gtgcacacacacctgctcaacccagagtggctggtgaactactttggctccctgtctgtg
gaggactctctggagtgcctcagggccatgctgtccgccaacatccgccagaacctgcag
atctgtgtccaggtggcttccaagtaccacgaacagctcaccacacagtccctcactgag
ctctttgaatccttcaagagctttgaaggtctgttctacttcctgggctctattgttaac
ttcagtcaggacgctgaagttcacttcaaatacatccaggccgcctgcaagaccggccag
atcaaagaggtggagaggatctgcagagagagcaactgctacgacccggagcgcgtcaag
aacttccttaaggaagccaaactcaccgaccagctgccactcatcatcgtctgtgaccgc
tttgactttgtccacgacctggtgctctacctgtaccgcaacaacctgcagaagtacatc
gagatctatgttcagaaggtgaatcccagccgtctgcctgttgtggtcggtggtctcctg
gatgttgactgctcagaggatgtcatcaagagtctgatcctggtcgtcaggggacagttc
tctaccgatgaactggtcgctgaggtggaaaagaggaacagactgaagctgctgctgccc
tggctggagtctcgtatccacgaaggctgcgaggagcccgccacccacaatgccctggct
aagatctacatcgacagcaacaacaaccctgaacgcttcctgagggaaaaccccttctac
gacagccgtgtggtgggaaagtactgcgagaagagagacccccacctggcctgtgtggcc
tacgagagaggacagtgtgaccaggagctgatcaatgtctgcaatgagaactccctgttc
aagagcttgtctcgctacctggtgcgccgcaaagaccctgacctgtgggccagcgtgctg
ctggagaccaaccccttcagaagaccactcattgaccaggtggtgcagacagcgctgtca
gagacccaggacccagaggaggtgtccgtcacagtcaaggccttcatgaccgcagacctg
cccaacgagctcatcgagctgctggagaagattgtgctggacaactctgtcttcagtgaa
cacagaaatctgcagaacctgctgatcctaaccgcaatcaaagccgaccgtacccgagtg
atggagtacatcagcaggctagacaactatgacgcccccgacatcgctaacatcgccatc
agcaacgagctcttcgaggaggccttcgccatcttcaagaagtttgatgttaacacctcc
gctgtgcaggtgctgatcgaacatattggcaacctggaccgggcctatgagtttgcggag
cgctgcaatgagcctgccgtgtggagccagctggctaaggctcagctccagaaggacctg
gttaaagaggccatcgactcgtacatcaaagccgacgatccctctgcatacatggaggtg
gtgcaggctgctgataagagcggaaactgggaggacctggtgaaattcctgcagatggct
cgtaagaaggcccgcgagtcctacgtggagacggagctcatctttgccttggccaagacc
aaccgcctggcagaactggaggagttcatcaacggacccaacaacgcccacatccaacag
gtgggtgaccgctgctacgatgagaaaatgtacgatgccgctaaacttctctacaacaac
gtctccaacttcggtcgtctggcttcgactctggtgcacctcggggagtaccaggccgct
gtggacggcgcccgcaaggccaacagcacccgcacctggaaggaagtgtgcttcgcctgc
gtggacggaaaggagttccgactggcccagatgtgcggtctccacatcgtggtgcacgct
gacgagctggaggagctgatcaactactaccaggaccgcgcttactttgaggaactgatc
accatgctggaggccgccctgggcctggagcgcgctcacatggggatgttcacggagctc
gccatcctgtactccaagttcaagccgcagaagatgagggagcacctggagctcttctgg
tccagagtgaacatcccgaaggtcctgagagcagcggagcaggcgcacctgtgggccgag
ctggtcttcctgtacgacaagtacgaggagttcgacaacgccatcatcaccatgatgaac
caccccacagacgcctggaaggagggccagttcaaagacattatcaccaaggtggccaac
gtggagctgtactacaaagccacacagttctatctggagttcaagcccttgttactgaat
gatttgctcatagtgctttcccccagactggaccactcccgtgctgtcaacttcttcagc
aaggtgaaacagctgcctctggtcaaaccctacatgcggtcagtacagagccacaacaac
aaatcagtcaatgaagcacttaacaacctcttcatcacagaggaggactatctggcactg
aggacatcaatagacgcctacgacaactttgataacatctccctggcccagcgcctggag
aagcacgagctgatcgagttcagacggatcgctgcgtacctcttcaagggcaacaaccgc
tggaaacagagtgtggagctgtgcaagaaggacaagctctacaaggacgccatgcagtac
gcgtcggagtcgaaggacgtggagctggccgaggagctgctgtcctggttcctgcaggag
gacaagaaggagtgtttcgccgcctgcctgttctcctgctacgacctgctgcggcccgac
gtggtgatggagaccgcctggaggcacaacctcatggacttctctatgccatacttcatt
caggtcatgagggagtacctcagcaaggtagacaaactagaaacctcagagactgtaagg
aaagaggaggagcaggcaacagagacgcaacccatcgtctacggcacaccccagctgatg
ctgacggcgggccccaccgtccccgtggctccccagcaaccctacggctacggctaccag
gcgcccgcaggcttcgctccgccagctgctcagccaggctttggctacggcatgtaa
DBGET
integrated database retrieval system
