KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117458329
Entry
117458329         CDS       T09629                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
  KO
K12842  U2-associated protein SR140
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117458329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pgeo03041]
    117458329
Spliceosome [BR:pgeo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117458329
 Complex B
    117458329
SSDB
Motif
Pfam: Surp CID RRM_1 cwf21 CTK3 RRM_7 DUF745
Other DBs
NCBI-GeneID: 117458329
NCBI-ProteinID: XP_033954615
LinkDB
Position
14:19035066..19046586
AA seq 880 aa
MADRKGKPITPIKTLSKKEQKELKKKEEEKAAEVFEEFLASFENTKKGGGKTFVHGGIVN
ATKEEKATEVKKSELYRPASNFVPFPQHVSSAESKKATQKRKSDEKKKSNLELFKEELKL
IQEEREERHKKKTNDPDGGGGGGCGGNLDILLSGRSVLYDDLTVPTTTNLYIGCISPKMN
EEILCKEFGKYGPLASVKIMWPRTDEERCRTSNRAFVAYMTRKDAERALASLDGKVIMGF
EMKLGWGKPARIPPQPLYTPVGVRATPPPPSGLPFNAQPRDRFRNDFTKPLGMSKGEMDK
TLSEAVVKVVIPTERNLLFLIHRMIEFVVREGPVFEAVIMNKEKNNPDYRFLFENKSQKH
VYYRWKLFSILQGQTPTEWRTADFRMFRGGSMWRPPILNNYSQTGEDSAEAEEEAPPEEE
VKKGQLKAEHKQRLETLLKELTPNREDIANTMQFCLQRADSAEEVVGHITQSFSLLQTPP
QKKIARLYLVSDILHNSCAKVPGASYYRKYFETKLTQIFGDLNAAHKNIQARLQAEQFKQ
KVSCCFRAWEDWTIYPEPFLIHLQNIFLGFTKAVEETMEPVVEEVSSYLDGAPLDNALID
GLPLRAPVDDLDGCPLGWDPLDGVPVDDIDGVPLGVAIDDIDGMPLEEGSVPLSGVPLSK
WEKTVDSGTFSQVMLGSKWDMVVEKTSANEVKVSANSQDGDDDSESDSSDDGGGSSKYDN
AYFQSSLKSFQMSESKRKRLRELEVKVMKIQDELECGKRQRKSGMSIQQQVEHYRNKLLQ
KEFEKDEDKNERLTSKPKDRSKDDRRDRDRSKRSVEGVRRRGRSRDPDDHARKSRSISPL
KTRSPKWSKRSRSPSPDRKTRKSRSRSPHRSHKKAKKSKH
NT seq 2643 nt   +upstreamnt  +downstreamnt
atggctgatagaaagggaaaaccgatcactccgatcaaaacactctcaaagaaagaacaa
aaggagctcaagaaaaaggaggaagaaaaagcagcagaggtttttgaagaattcttggct
tcgtttgaaaacaccaagaaaggtggagggaaaacgtttgtccatgggggaatcgtgaat
gcaactaaagaggagaaggcaaccgaggtcaagaaaagtgagctttatcgacctgcttcg
aattttgtcccctttccccagcatgtatcatctgctgagagcaaaaaggctacacaaaaa
agaaagtcagacgaaaagaagaagagtaatcttgaactcttcaaagaagagcttaaacta
atccaagaagagcgtgaggagagacataaaaagaagaccaatgaccctgatgggggggga
ggaggaggatgtggaggaaatctggatatactattatctggacgatcggtattatatgat
gacctaacagtgccaaccaccactaacctctacatcggctgcattagcccaaagatgaac
gaggaaattctctgcaaagagttcggtaagtatggtcctctggccagtgtgaagataatg
tggccccgaacagacgaggagcgctgcaggacctccaacagagccttcgtggcttacatg
acccgcaaagatgcagagagagccttggcttcactcgatggtaaagtcattatggggttt
gaaatgaagctgggatggggtaaaccagctcgtattccacctcagcctctctacacaccg
gtgggggtgagggccacgccaccccccccatctggtctgcctttcaacgctcagccgagg
gaccgcttccgcaacgacttcaccaagccgctgggcatgtccaaaggagagatggacaag
actctgtccgaagccgtagtcaaagtggttatcccgacagaaaggaatctattattcctc
attcacaggatgatagagtttgtggtgcgtgaaggacctgtgtttgaagctgttatcatg
aacaaggagaaaaacaatccagactacaggttcctttttgaaaacaaaagccagaagcat
gtgtactatcgctggaaactattctccatcctccagggacagaccccgacagaatggagg
accgcagattttcgaatgtttcgggggggctccatgtggagaccccctatcctgaacaac
tactctcagaccggtgaagatagtgccgaggcagaggaggaagctccccctgaggaagag
gtgaagaaagggcagctcaaagcagagcacaagcagaggttggagactttgctaaaagag
ctcactcccaacagagaagatatcgccaataccatgcagttctgtcttcagagggcagac
tcggcagaggaagtcgtgggacacatcactcagtctttctccttgcttcagacgccccct
cagaagaagattgccagactatatctcgtgtcagacatcttgcacaactcatgtgccaaa
gtgcccggtgcatcatattatcgtaaatattttgaaacaaagcttacacaaatatttgga
gaccttaatgcagcgcataaaaacatacaggccaggctgcaggcagagcagtttaagcaa
aaggtctcgtgttgttttagagcatgggaggactggaccatataccccgagccatttcta
atccaccttcaaaacatctttctgggcttcaccaaagctgtagaggagacgatggagcca
gtggtggaggaagtatcctcttatctcgatggcgcgccattggacaacgcgctcatagac
ggcttgcctctcagagcgcccgtggatgacctcgacggctgccccttaggctgggaccct
ctggacggggtccctgttgacgacattgacggtgtccccttgggagttgccattgacgac
attgatggcatgccattggaggagggcagtgttcctctctccggcgtgcctttgtcgaaa
tgggagaagacggttgactccgggacgttttcccaagtcatgcttgggtccaagtgggac
atggtggtggagaaaaccagtgcgaatgaagtgaaagtaagtgccaactcgcaggatggt
gatgacgactctgagagcgacagcagtgatgacggcggcggttcgtccaaatatgacaat
gcatatttccagagctccctcaaaagttttcaaatgtccgagagcaaaaggaaacggttg
agagagctggaggtgaaggtaatgaagatccaagatgagctcgagtgtggaaagaggcag
aggaagtcgggaatgagcatacagcagcaggtggagcactacaggaacaaactgcttcag
aaggagtttgaaaaagatgaagacaaaaacgagagactgacatcaaagcccaaagacagg
tcgaaggatgacaggagggacagagatcggagcaaacgaagtgttgagggcgtcaggaga
cgaggaaggagtcgagatccagacgaccacgcccgaaagtcgaggagcatctctccttta
aagacaaggtctcccaaatggtccaagcgttcccgatcaccatctccagaccggaagacc
aggaagtccaggtcgcggtcgccacatcgctcccataagaaagcaaagaagagcaaacac
tga

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