Pseudochaenichthys georgianus (South Georgia icefish): 117458347
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Entry
117458347 CDS
T09629
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117458347
Peptidases and inhibitors [BR:
pgeo01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
117458347
BRITE hierarchy
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117458347
NCBI-ProteinID:
XP_033954651
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Position
2:complement(5136152..5171902)
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AA seq
1204 aa
AA seq
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MLPSLHWLLLLWGLQGLCAQDYGEDYEEEVVTTKKKLKVIPSNSIPQKSLIDEDCSLEIA
FLIDSSESAKDNHAQEKRFASDVMGRLQNLQLQTGRGLSSRAALLQYSSHVIIERTFKQW
RGIEDFKARITPIAYIGHGTYTTYAITNLTRIYLEESGPSSIKVAVLLFDGVSHPRNPDI
FSAVADAKNQGVRFFTIGITPEANEQANVAQLRLIASSPASRYLHNLQDRGIVDKFIKEI
TALADEGCPLAQSKCACDKGERGPSGPAGKKGRPGEDGNPGTKGHKGEGGLSGLPGREGS
EGKSGYKGEQGERGECGTPGIKGDRGPEGTLGPRGNRGLQGSVGPPGDNGPEGPMGKKGE
RGLSGPPGIQGETGIGLPGPKGAVGYHGPTGPSGPQGLGEPGPPGPQGSQGVQGERGQIG
EGLPGPKGGRGLDGPRGIRGQPGVGLKGDKGDLGPPGLPGPLGLPGVGIQGEKGVEGPRG
PLGSRGPAGEGFAGSKGDQGLPGEVGSPGERGAGDPGAKGVPGSTGLSGLPGLPGEDGSP
GQKGESGPTGLRGLEGAAGIGTQGEKGDQGQRGIRGLHGAPGIAGPSGPKGEPGAQGRGG
SAGPPGRFVSGPKGDFGPSGPPGPLGETGYGLPGPKGDRGDFGPSGPFGPKGEGFPGPSG
PPGLPGLTGEPGQEGVGIPGPKGDVGYRGLPGVSGPLGEGLQGPPGNAGRPGPSGPTGPQ
GQGVQGPKGELGSQGVTGPRGLPGEGFPGAKGDRGSGGERGLKGIKGELGDPGNAGQPGR
SGVKGEAGLTRDDIIRMIKEICGCGIKCKERPMELVFVIDSSESVGPDNFEIIKDFVAAL
VDRVTVGRNATRIGLVLYSLEVKLVFNLARYNTKQDIKQAIRNIPYMGEGTYTGTAIRKA
TQDAFYSSRVGVSKVAIVITDGQTDKREPVKLDLAVREAHAANIEMFALGIVNTSDPTQA
EFIRELNLIASDPDAEHMFLIDDFNTLPALESKLVSQFCEDENGALIYNRITNGYNGNGN
NGYRNGNNGKYAVGGYPFGPSTEQQVQSGRNTGTNTGVQVDSKQQGSTGSSTGSSTGHGG
GSQYVLTGNERGDTFNRNTSEGEESSSTRGSSSSSSSSSSSRTTISSSGVSIERVKPALP
KERVPLDPHCGLVLDQGTCRDYNIRWYYDKQANACAQFWYGGCNGNKNRFDTEDECKRTC
VIVA
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgctgccttctctgcactggctcctgctcctgtggggacttcaaggtctctgtgcacag
gactatggtgaagactatgaggaagaggtggtgaccaccaagaagaagctcaaagtaatt
ccctccaattccataccgcagaaatcactcatagatgaagattgcagtttggagatagcc
ttcctgatcgacagctcggagagcgccaaggacaaccatgcccaggagaagcgcttcgcc
tcggacgtgatgggccggctccagaaccttcagctgcagacgggccggggcctcagctcc
agggccgccctcctccagtacagcagccatgtcatcatagagcggaccttcaaacagtgg
aggggtattgaagacttcaaggctcgaatcacacccatcgcgtacatcggtcacggcacc
tacaccacctacgccatcaccaacctcactcgtatctacctggaggagtcgggtcccagc
agcatcaaagtggccgtcctgctcttcgatggcgtctcacacccgaggaacccagatata
ttttctgccgtggctgatgccaaaaaccagggcgtccgattcttcaccatcggcatcaca
cctgaagccaacgagcaggccaacgtagcccagctgcggctaatcgctagctcccctgcc
tcccgctaccttcacaacctgcaggaccgaggcattgtggataaattcatcaaggagatt
acggctctggcagatgaagggtgtcctctggcccagagcaagtgtgcttgtgacaagggt
gagaggggacccagcggccctgctggcaagaagggccgtcctggagaagatggaaacccc
ggcacgaaaggacacaagggtgagggtgggctcagtggacttcctggtcgggaaggatct
gaggggaaatctggatacaaaggagagcagggagagagaggggagtgtggcactcctgga
attaagggagacagaggtcctgaaggtacacttggcccaagaggaaatcgtggacttcag
ggttcagttggtccacctggcgacaatgggcctgaaggtccaatgggtaaaaaaggggaa
aggggactttctggcccacctggaatccaaggggaaactgggatcggccttccgggaccc
aagggtgctgtgggttaccacgggcctacagggccttctggtcctcagggacttggcgag
cctggaccaccggggcctcaagggtcacagggagtccaaggagaaagaggacagatcgga
gagggtctccctggaccaaagggcgggcgaggcttggacgggccgcgggggatccgagga
cagccgggcgtcggactcaaaggagacaagggggacttgggccccccgggtcttccaggg
ccactcggcctcccaggagttggcatccagggcgagaagggtgtggaaggaccgaggggc
ccattggggagcagaggccccgcaggagagggctttgctggatccaagggggaccagggg
ttgcctggcgaggttggcagcccaggtgagagaggggccggagaccctggagcgaagggg
gtgccggggtctacggggctgtccggtctgcccggcctgccaggggaggacggatccccg
ggacagaagggagagtcaggacccacaggcctcagggggttagagggggccgctggaatt
ggcacccagggtgagaagggcgaccaaggccagagagggatccggggcctgcacggcgcc
cccggcatcgctgggccctcaggaccaaagggagaaccaggggcgcagggcagggggggc
tcagccgggcccccaggacgcttcgtctctgggccaaagggtgattttggcccgagtggt
cctcctggtccgctcggtgagactggctacggacttcctggtccaaagggggatcgtgga
gactttggcccttcaggtccattcggccccaaaggagagggcttccctggcccctcgggc
cctcctggtctgcctggactcacaggagaacccggacaggaaggagtgggcatccctgga
ccaaagggggatgttggttaccgagggttgccaggtgtgtcaggacctctgggcgagggc
ctccaaggacctccgggtaacgctgggcggcctggcccctcagggccgacagggccacaa
ggacaaggagttcagggaccaaagggggagctggggtcccagggtgtgacgggcccgagg
gggctgcctggagaaggctttcccggagctaaaggggaccgtggatctggaggggagagg
gggctgaagggaatcaaaggagagctgggagaccctggaaacgcagggcagcctggccgc
tctggtgtcaaaggtgaagccggcctcactagggacgacatcattcggatgatcaaagag
atctgtggatgtgggatcaagtgtaaggagcggcccatggagctggtgtttgtcatcgac
agctcggagagcgtgggcccggataactttgagatcatcaaggactttgtggcggcgctg
gtggaccgcgtcacggtgggccgcaacgccaccaggatcggcctggtgctgtacagcctg
gaggtgaagctggtgttcaacctggcgcgctacaacaccaagcaggacatcaagcaggcc
atcaggaacatcccgtacatgggagagggcacttacaccgggacagccatccgtaaagcc
acccaggacgcgttctacagctcccgtgtgggggtcagcaaagtggccatcgtgatcact
gacgggcagacggacaagcgggagccggtgaagctggatctggccgtacgagaagctcac
gccgccaatatcgagatgttcgctctggggattgtgaacacctcagacccaacacaggcc
gaattcataagagagctcaatctgatcgcctcggaccccgacgccgagcacatgttcctc
atcgacgacttcaacaccttgccagcgctggaatccaagttggtcagccagttctgtgag
gacgagaatggagccctgatatataacagaataacaaatggctacaacggcaatgggaac
aacggatacaggaacgggaacaacgggaagtacgccgttggaggctatcccttcgggcct
tccactgagcagcaggttcagagcggccgtaacactggcaccaacacaggggtccaggta
gactccaaacagcagggcagcacagggtccagcacagggtccagcacaggacatggagga
ggaagtcagtatgtgttgactggaaacgagcgcggggacacatttaaccgcaacacctca
gagggagaggaatcctccagtacgagaggctcctcctcctcatcttcatcatcttcttcc
tcaagaacaaccatatcatcctcgggcgtgtccatagagcgcgtaaagccagcgcttccc
aaagagagagtgccgctggaccctcactgcggcctggttctggaccagggcacgtgtcga
gactacaacatccgctggtactacgacaagcaggccaacgcctgcgcacagttctggtac
ggaggctgcaacggcaacaagaaccgctttgacacggaggacgagtgcaagaggacgtgt
gtgatcgtcgcctga
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