Pseudochaenichthys georgianus (South Georgia icefish): 117458399
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Entry
117458399 CDS
T09629
Symbol
bnip1b
Name
(RefSeq) vesicle transport protein SEC20 isoform X1
KO
K08497
protein transport protein SEC20
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117458399 (bnip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117458399 (bnip1b)
Membrane trafficking [BR:
pgeo04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
117458399 (bnip1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
Apc5_N
Motif
Other DBs
NCBI-GeneID:
117458399
NCBI-ProteinID:
XP_033954736
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Position
14:complement(15244697..15252808)
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AA seq
230 aa
AA seq
DB search
MASSADVHVRICGQEIIKYDLEIKALVQDIRDCPGPQSTLMEFNSQVKEKFNKLRLRIQD
LEQMAREQDRETDRLAILSETENQRRQMLSNQTAWRKANLACKLCIDHSEKDELLQGGDY
QSTRQRKVTKECLVETSSNITESLMSISRMMSEQVKQTEDTIGTLATSSRTVLETNEEFK
SMTGTIHFGRKLILKYNRRELTDKLLIFLALALFFATVLYILKKRLFPFI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctgcggatgtccacgtccgaatttgtggacaagaaataatcaaatatgac
ctggaaattaaggcacttgttcaggatatcagggattgccctggacctcagtcaactctc
atggagttcaactctcaggtcaaagagaagttcaacaaactgagactcagaatacaggat
ctggagcagatggccagagagcaggacagagagacggacagactggccatcctgtcagag
acagagaaccagaggagacaaatgctgagtaaccagacagcatggaggaaagcaaacctg
gcctgtaaactctgcatcgaccacagtgagaaggacgagctgctgcaaggaggagactac
cagagcaccagacagaggaaggtcacaaaagaatgccttgtggaaaccagcagcaacatc
accgagagtttgatgtcgatcagcaggatgatgtctgaacaggtgaagcagaccgaggac
accatcggcactctggccacctcctccaggacagtgctggaaaccaacgaggagtttaaa
agcatgacaggaaccatccacttcgggcggaaactgatcctgaagtacaaccggcgtgag
ctgacagacaagctgctcatcttcctggctctcgccctcttcttcgccaccgtcctctac
atccttaagaagcgtctctttcccttcatttag
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