Pseudochaenichthys georgianus (South Georgia icefish): 117458411
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Entry
117458411 CDS
T09629
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117458411 (zc3h12b)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117458411 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
117458411
NCBI-ProteinID:
XP_033954751
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All DBs
Position
14:32181257..32194622
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AA seq
845 aa
AA seq
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MTVWLMVEKLKMEKRPCREENIDSSEAQHASDDSEDGSSSESESEEQQHQRVQVSRGKKR
EPLDVAKPHRQLCRSPCLDRPSFSQSSTAQECREDDSSAGSGIKRASEREYQTKMEFALK
LGYSGEQVETVLNKLGSAALINDLLAELVRLGNKVEPEIQPCSSTATSISRPPCVKETVS
PEVSMEDDSSSDIFDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDITVF
VPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLSYDSDG
IIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVV
PEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALVKCG
TGPATVKGDSISEVKRVAPKRQSDPSIRSVACEPPEALSVARKSEANSVPSLVSALSVPT
MQPIKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASITYNDQFP
KYDSVSDHGYYSLHSDFSTMSMGSMHNVDSFCSMEHEHGAYQRNPSHCPEPCLSHSNSDS
FSSYGDMYQGSVDSSLEEGMKGQQQSPAPGRMQAFSHGFRHEALTRVQSYGPEEPKQGPR
KLPGSRLAPHIQHVAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYDS
NPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWN
SPWEMPSAAEHQERYAIPDHQYQTYRNLCNIFPAYVVHSVMEKNRHLTDPQQLAAVIVTK
LRSCH
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgacagtatggttgatggtggagaagctcaaaatggaaaaacgcccatgcagggaggag
aacattgactcaagcgaggcccagcatgccagtgatgattccgaggatggaagcagctca
gaaagcgaatccgaagagcagcaacaccagagggtccaggtgagcaggggtaagaagagg
gagcccttggatgttgccaaaccccatcgacagctctgtcgctctccatgccttgaccgg
cccagtttttcccagagtagcaccgcgcaagagtgtcgtgaagatgactccagcgcggga
tccgggataaagcgcgccagtgagagagagtaccagactaagatggaattcgcattgaag
ttgggctattctggagagcaggtagagacagtgctcaacaagctggggtctgctgcactt
atcaacgacctccttgctgagttagtaaggcttggaaacaaagtagaacctgaaattcaa
ccttgcagcagtacggccacatcaatatcccggcccccctgtgttaaagagactgttagt
ccagaggtgtcaatggaagatgactcctcatcggacatctttgataacctcaggcccatc
gtcatcgatggctccaatgtggcaatgagccatggaaacaaggaggtgttctcttgccgt
gggatccaacttgctgttgaatggttcttagagaaaggacacaaagatatcactgtgttt
gtccccgcctggagaaaggaacaatcaaggccagatgccctcatcacagatcaagaaata
ttacgcaagctggaaaaagagaagatcctggttttcactccatctcggagagttcaaggc
aggagagtggtgtgctatgatgatcgcttcatagtgaagctgtcttatgattctgatgga
attattgtgtcaaacgacaactacagagacctgcaaaatgagaaaccagagtggaagaag
ttcatagaagagcgtctcctaatgtactcatttgtcaatgacaagttcatgccgcctgat
gatccattgggaagacatggtccaagcttagaaaatttccttcgcaagcgtcctgttgtt
ccagagcacaaaaaacaaccttgcccctatgggaaaaagtgcacatatggacataagtgc
aagtactatcatccggagcgtgtcaaccagccacagcggtcagtcgctgatgaactgcgg
gcttttgccaaattgtctgcggtgaagacaatgagtgagggggctttagttaaatgtggt
actggtccggcaactgttaagggggatagcatctctgaggtcaaacgggtggcacccaaa
cgtcagtctgaccccagtattcgctctgtggcctgtgaacccccagaggcactgtccgtt
gctaggaagtctgaggcaaattcagtgccttcccttgtgtctgctctcagcgtacccacc
atgcagcctattaagagccacgcagctggggccttgaacacacgatcagccagtagccca
gtgccgggttctttgcagtttgcgcacagttctctagagcacatgtccagtgtacagtac
cctcctattttagttactaatagtcatggcgcctctataacttacaatgaccagtttcca
aagtatgactcagttagcgaccatggatattattcactgcacagtgatttctcaactatg
agcatgggcagcatgcataacgtggacagtttctgtagcatggagcacgagcatggcgcg
tatcagagaaatcccagccactgccctgagccctgcctcagccattcaaacagtgactcc
ttctcctcttacggggacatgtaccagggctctgtggacagtagcttagaagagggcatg
aaggggcagcagcagtctcccgcaccgggtaggatgcaagctttctcccatgggtttcgt
catgaagcgctgactagagtacagagttatggccctgaggaacccaagcaggggcccagg
aagctgcctggatcgcgtctagcaccacatatccagcacgttgcggtgggagccaggtcc
agctgtcctggagactatcccctcactcagaatgtcctcccacctctgtcctcgcagccc
acaaggtctctcggtatgacccggatggacagcatatcggactcaaggctgtatgatagc
aacccaatgagacagaggcgacctccactctgccgcgagcagcatgcgagctgggaccct
ctgccttgcggtaatgagtcctatggatatcattcatatcctttgagtaacagcctgatg
ccgtgttgcgagcgagtgatggtccgcagcatgccagacaaaatggaacaaatctggaat
tcgccatgggagatgccctctgcagctgaacaccaagagcggtatgccatcccggaccac
cagtatcaaacatatcgcaacctttgtaacatctttcctgcttatgttgtccactcagtc
atggagaaaaaccgtcatttgacagatccacaacagcttgccgccgtcattgtcacaaaa
ttgaggtcatgccattaa
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