Pseudochaenichthys georgianus (South Georgia icefish): 117458429
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Entry
117458429 CDS
T09629
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a
KO
K08583
calpain, small subunit 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117458429 (capns1a)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C2: calpain family
117458429 (capns1a)
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Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
117458429
NCBI-ProteinID:
XP_033954786
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Position
14:33056465..33061673
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AA seq
216 aa
AA seq
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MNFAKKFLSGVIDVVSNIDPAQFIPSEPPPPRRPAVYAEQHENDEEKQFRRVFQQLAGED
MEVSPSELMNIMNRIISKHGDLKTDGFSIESCRSMVAVMDSDSTGKLGFHEFKHLWNNVK
KWQGVYKSYDADGSGVIGADELPSAFTAAGFPLNDYLFNMIIRRYSDESGNMDFDNYIGC
LVRLDAMCRAFKTLDKDNNGTIKVNVQEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgccaaaaagtttctcagtggcgtcattgatgttgtcagcaacatcgaccca
gcccagttcatcccctctgaacctcctcccccccgcaggcctgctgtatatgcagagcag
cacgagaacgatgaggagaagcagttccgccgagtcttccagcagcttgctggagaagac
atggaagtaagcccatctgagctgatgaacatcatgaacagaatcatttcaaaacatgga
gacctgaagacggatggtttcagcattgagtcgtgtagaagcatggtggctgtcatggat
agtgacagcactggaaaactcggctttcatgaattcaaacacctctggaacaatgtcaag
aaatggcagggcgtgtacaagtcctacgacgcagatggctccggtgtcatcggtgcagat
gagttgcccagcgctttcacagctgcaggcttccccctcaacgactacctgttcaacatg
atcattcgcagatacagcgatgaaagtgggaacatggattttgacaactacattggctgc
cttgtgaggctggatgccatgtgccgtgccttcaaaaccctggataaagataacaacggg
acaatcaaagtcaatgttcaagagtggcttcagttgaccatgtactcttga
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