KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117458460
Entry
117458460         CDS       T09629                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00565  Ether lipid metabolism
pgeo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    117458460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pgeo03036]
    117458460
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pgeo04147]
    117458460
Chromosome and associated proteins [BR:pgeo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    117458460
Exosome [BR:pgeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117458460
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_DCAF4 LisH WD40_RFWD3 LisH_PAC1 Beta-prop_RIG_2nd Beta-prop_IFT140_1st eIF2A Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc ARMC9_LisH LisH_WDR26 DUF2570 SutA-RBD LisH_2
Other DBs
NCBI-GeneID: 117458460
NCBI-ProteinID: XP_033954835
LinkDB
Position
14:15666076..15679556
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAEIDMNEEVDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTHGGPVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMSIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVASKECKAELREHEHVVECIAWAPDSAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSIGICLMTLVGHDNWVRGILFHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagagacaaagagatgaactaaatcgagctatagccgactatctccgt
tccaatggatacgaggaggcctattccaccttcaagaaagaggcagagatagatatgaat
gaagaggtagataaaaagtatgcagggcttttggaaaagaaatggacttcagtcatcaga
ttacagaagaaggtgatggagttggagtctaaattaaatgaggcgaaggaggagatgaca
catggaggacctgtgggtcagaagagagaccccaaggagtggatcccccgtcccccagaa
agatacgccctgagcgggcaccgcgctccggtcacacgggtcatattccaccccgtcttc
tccgtcatggtcacagcctctgaggatgccaccatcaaggtgtgggactacgaggcgggg
gactttgagcggaccctgaagggacacacagactctgtgcaggacatttccttcgaccag
acgggaaagctgctggcttcatgttcagctgacatgagcatcaaactttgggactttcag
gggttcgagtgcatccgaacaatgcatggccacgatcacaatgtgtcgtctgtagccatc
atgccaaatggcgaccacatagtgtctgcctccagagacaagaccatgaagatgtgggaa
gtcgccactgggtactgtgtgaagacattcacaggccacagggagtgggtgaggatggtg
cgtcccaaccaggacggttcgttgatcgccagctgctccaacgaccagacggtgcgtgtg
tgggtggtcgcctcgaaggagtgcaaagctgagttgcgggagcatgagcatgtggtggag
tgcatcgcctgggcccctgacagcgcccaccccaccatcctggaggccacgggctcagag
agcaaaaagagcgggaaacctggccccttcctcctttccggatccagagacaaaacaatt
aagatgtgggacgtcagcattggcatctgccttatgactctggtgggacatgacaactgg
gtgcgtgggatattgtttcatcctggaggaagattcatcgtaagctgtgctgatgacaaa
accctgaggatctgggactacaagaacaagcgttgcatgaagaccctgagtgcccacgaa
cactttgttacctctctggatttccataagactgctccctacgtggtgacgggcagcgtt
gatcagacagtcaaagtgtgggagtgccgctaa

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