Pseudochaenichthys georgianus (South Georgia icefish): 117458479
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Entry
117458479 CDS
T09629
Symbol
paxbp1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117458479 (paxbp1)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117458479 (paxbp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
117458479
NCBI-ProteinID:
XP_033954872
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All DBs
Position
14:20520342..20530859
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AA seq
927 aa
AA seq
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MFKKAKRANFRRRNESDEEELEEGRSVPPISSGPAVEEIPFMETSISVTAAPISIDNFHS
NGFPANVNTFRAIKKEKKVKDTPIIAATVPGPTKASLLSFDDDEDESEVFRVKKPTHSKK
IVKQLKKEYKEDLEKSGVKQEHKSDAPFQPAVSIKEEVTSRAGSEQGEEEMEVDSTDEHQ
QEEAKSHVGQAQSHVGQAQSQVSKSNITTSSFNTLSTLGSLKPGEIPDAAFIHAARKRRQ
QAREQGGEPPLVETENPKKRMAQEDQGASDDEDEDEKRIRFSGVKNITQRQKIAEEIGIE
GSDDEALDTGQDEESSRWEQEQIRKGISIPQVQSSQPEDNAVYYQNSYETQPYGSSYSMP
FTYSTVVQQPKPTGRADNGSVHYGTPISDLTPISIDLVKKRLQDRLSQMRVGHDANARRN
KQIEEDLASSESAIEQLEGSSNNNSNQYKFLQEMRGYVGDLLECFSEKVPAVLELEAAMH
QLLRQRASRLVQRRQDDIKDESSEFASLSNKAVMAPNLDSFGRDRAVYQENSRQRRIAER
EARRTRRRQAREQNGKRAEHKEGLSSDDEETSTDITSVNMERDRIIRECKKAFEDVVEDF
HSLDCIKSHFEVWRREYADCYRDAYIGLCLPKLFNPLVRLQLMMWNPLEAQCANFEYMLW
FESLLFYGFEENSVLQRGDGDISLLPSIVEKVVLSKLTVLAEQVWDPLSNSQTARVVGFI
RRLMKSYPTVLHGENRYTQELLKMIVFRIRRTLDEDVFLPLYPKNVLENKNGGPYLFYQR
QFWSCVKLLGNILQWEGILSGSCLRDLALDSTLNRYILSALQTTDTGEDNVPKCQKVVEC
LPVQWFSGLKGQKTLPQLEPFCRYLTHLASSFHRGSLGGSDLERRSAKDLIKEVVKMLGQ
MNALDHIITVAAEHGIKDIKPLLEAKS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaagcgaaacgagctaacttccgacggaggaatgaatccgacgaggaagaa
ctggaggagggtcggtcagtgccgccgatatccagcgggcctgccgtggaggaaatcccg
tttatggagacttccatcagcgttacagcagcacctattagcatcgataactttcacagc
aacgggtttccggccaacgtgaacacgtttagagctatcaagaaagagaagaaggttaaa
gatacacctatcattgcagctacggtgcctggacccacgaaagccagtttgctgagtttc
gacgatgatgaagatgaatccgaggtgttcagagtgaagaagcccactcacagtaagaag
attgtcaaacaactgaagaaagaatataaggaggatttggagaagtccggagtcaaacag
gaacacaaatcagatgctccatttcagcctgcggtttcaatcaaagaggaagttaccagc
agagccggcagtgaacagggggaggaagagatggaggtggacagtactgatgagcatcag
caggaagaggcaaagagtcacgttggccaggcacagagtcacgttggccaggcacagagt
caagtgtccaagagcaacatcactacatcatcattcaacacactttcaactctgggcagc
ctgaaaccaggggagatccccgatgcggcatttattcacgctgccagaaagcgccggcaa
caggccagagaacaggggggggaaccgcctctggtagagacggagaatcccaaaaagcgt
atggcacaagaagaccaaggcgctagcgacgacgaagacgaggatgagaagaggattcgc
ttcagcggagtcaagaacataacccagagacaaaagatcgctgaagaaataggtattgag
ggtagcgatgacgaggcgctggatacaggtcaggatgaggagtcgagccgctgggagcag
gagcagattaggaaaggaatcagcataccccaggtccaaagcagccagccagaggacaac
gcggtctactaccagaacagctacgagacccagccctatggctcctcctacagcatgccc
tttacctacagcactgtggtccagcagcccaagcccaccggccgagcagacaacggctct
gttcactacgggacccctattagcgatctaaccccgatatccattgatctggtaaagaaa
cgcctgcaggataggctcagccaaatgcgtgtgggccacgatgcaaacgccaggcgcaac
aaacagatcgaagaagacttggcctcctctgagagtgccatagagcagctggagggctca
tccaataacaattcaaatcaatataaattcttgcaagagatgcgagggtatgttggagac
ttgcttgagtgtttcagtgaaaaggtgcctgctgttctggagttggaggctgccatgcac
cagttactaaggcaacgggcctcacgacttgtccagagaagacaggatgatattaaagat
gaatcgtcggagtttgcaagcctttcaaataaagctgtcatggctcctaatctggactca
ttcggtcgagaccgcgcagtataccaagagaacagccgtcagaggaggatagcagaaaga
gaagcacgacgaactcggcggcgacaagctagagagcagaatggaaaaagggccgagcat
aaagaaggcttatcatctgatgacgaggagacatccactgacataaccagcgtcaacatg
gagagagatcggatcatccgggaatgtaagaaagcatttgaggatgtcgtggaggacttc
cattcactcgactgcatcaaatcccattttgaagtgtggaggagagaatatgccgactgc
tacagagacgcttacatcggactctgcctgcccaaactcttcaaccctttagtccgcctg
cagctcatgatgtggaaccctctcgaggctcagtgtgcaaattttgagtacatgctgtgg
tttgagtcgctgctgttctacggcttcgaggagaacagcgtgctgcagagaggagacggg
gacatcagcctgctgccttctattgtggagaaggtcgttctctccaaactgacagtgttg
gcagagcaagtatgggacccgctgtccaacagtcagacagccagggtggtgggcttcatt
cggagactaatgaaaagttaccccactgtgctgcatggagaaaaccgatacacacaggag
cttctgaaaatgattgtcttcaggatcaggcggactctggatgaagatgtcttccttcca
ctctaccccaaaaatgtcttggagaacaagaatggcggcccttacttattctaccagagg
cagttctggtcctgtgtgaagctgctgggcaacatcctgcagtgggaaggcatcctgtca
ggttcctgtctgagggacctggcattggacagcactctgaacagatacatcctctccgct
ctgcagaccaccgacacaggggaggacaatgttcccaagtgccagaaggtggtggagtgt
ttgcccgtgcagtggttctctggactgaagggccagaagacgttgcctcagttggagccg
ttttgtcgctacctcacccacctggccagctcgtttcaccgcggcagtttgggcgggtct
gatttggaacggcgctctgccaaggacctgatcaaagaggttgtgaagatgttgggccag
atgaatgctctggaccacatcatcaccgtggcagctgagcatggcattaaagacatcaag
ccacttttggaagcaaagtcgtag
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