Pseudochaenichthys georgianus (South Georgia icefish): 117458506
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Entry
117458506 CDS
T09629
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117458506 (pds5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117458506 (pds5b)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117458506 (pds5b)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
117458506 (pds5b)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
117458506 (pds5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
117458506
NCBI-ProteinID:
XP_033954936
LinkDB
All DBs
Position
14:17021208..17078201
Genome browser
AA seq
1415 aa
AA seq
DB search
MAHSKARVTDGKVTYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEFLRVRSH
DPEEAIRHDVIVSIVTAAKKDLSLVNDALLNFVKERTLDKRWRVRKEAMMGLASIYKKYS
LQGEGGREASKQISWIKDKLLHIYYQNSIDDRLLVERVFAQYMVPHNLETTERMKCLYYL
YATLDTNAVKALNEMWKCQNLLRNNVKDLLDLVKKPKSDASSKAVFAKVMVITKNLPDPG
KAQDFVKKLAQVLDDDERIRDQLETLVSPSCSCKQAEVCVRDITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEEEGVLTEEAIRAGLELLKVLSFTH
PVSFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGSKMEESFPHIKSVLLPVLQAKAKR
GPPRQAKYSIHCINSMFTNRDTHFAQIFEPLHKGLDPANLEQLITPLTTLGHLAQLAPEQ
FAAPLKSLVANFIVKDLLMNDRIPGKKTTKLWVPDEEVSPETLAKIQGIKLMVRWLLGVK
NNQSKSGNSTLRMLTAILHSDGDLTEQGRMGKPDMSRLRLAAACALLKLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQCFSQKLHRGLCRLRLPLEYIGVFALCAKDPVKERRAHARQ
CLVKNINIRREYLKQHAAISDKLFSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKEIKEA
LWFVLEIIMAKNENNSHAFIRKMVENIKQTKDAQAPTDPKTNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPSTFFTKADKNFNNTKNYLPPEMKSFFTPGKPKSANVLGAVNKPLAA
AGKQIQSKASRMETASNEDSSSNPGSPQRSKTRLDSTELDHSENEDFSLKRADGTDKDIE
KPRGRKRVVASIEDQDNKPKRGRKKAAANTTPVAESEDQWDEDNRPEDEQNSPPKKGRRG
RPPKSATPSQDTPAKGKRGRKKAAPPPEEEEEEEEEEEEKIEEEEPAEDEEADKSSENVE
LKTKGGRPARTPRRSQGSTESAESTPQKRRGRPPKSAQPPAKKPARGGRSKAAAAKDDPE
EEEEDDEEQEEQEEQEEQEDVPTPKGRKKAAVRRR
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaaagctcgagtcacagatgggaaggtgacctaccccccgggggtcaag
gagatttctgacaaaatctccaaagaggaaatggtccgtaggctcaagatggttgtcaag
accttcatggacatggaccaggactctgaggaggagaaggagctgtacctgaacctggcc
ctccacctggcctcagacttcttcctcaaacatcctgacaaggacgtgcgtctgctggta
gcctgctgcctggcagacatattcaggatctacgcccccgaggcgccctacacctccccc
gataaactaaaggacattttcatgttcatcaccaggcagctcaaaggactggaggacacg
aaaagcgctcagttcaacagatacttctacctgcttgagaacatagcatgggtgaagtcc
tacaacatttgctttgaactcgaagacagcaatgagattttcacccagctttacagaaca
ctcttccaggtcatcaacaacggccacaaccagaaagtgcacatgcatatggtggacctg
atgagctccatcatctgtgagggagacaccgtgtcgcaggagctgttggacactgtgttg
gtcaacctggtgccagctcacaagaatttaaataaacaagcatatgacctggccaaagct
ctgctgaagaggactgctcaggctatcgagccttacatcaccaatttcttcaaccaggtg
ctgatgctgggaaagacctcggtcagcgatctgtccgagcatgttttcgacctcatcttg
gagctttacaacatcgacagccatctgctgctctcagtgcttccgcagctcgagttcaag
ctcaagagtaatgataatgacgagaggctgcaggtggtgaagctgctggctaagatgttt
ggagccaaggactctgagctggccgcacagaacaaaccgctgtggcagtgttaccttggc
aggtttaacgacatccatgtgcccatcagactggagtgtgttaagtttgccagtcattgt
ctcatgaaccacccagacctggccaaagacctcacagaattcctgagggttagatcacat
gacccagaggaggccatccgccatgatgtcatcgtctctatagtaactgctgccaagaaa
gacttgtctctagtaaacgatgcattacttaattttgtaaaggagaggacgttggacaag
aggtggcgtgtacgtaaggaggccatgatgggcctggcatccatctacaagaagtactcg
ctgcagggagagggcgggagggaggcctccaaacagatttcctggatcaaagacaagctg
ctccacatctactaccagaacagcatcgatgacaggttgctggtggagcgggtctttgca
cagtacatggttcctcacaacctggagaccactgagaggatgaagtgtctctactacctg
tatgccaccctggacacaaatgctgtcaaagctttgaatgagatgtggaagtgccagaat
cttctgagaaacaatgtcaaagacctgctggatttggtcaaaaagcccaagtctgacgca
tcgagcaaggccgtatttgccaaagtcatggtgatcacaaagaaccttccggacccaggc
aaagctcaggactttgtgaagaagctggctcaggtcctggatgatgacgagcgaatcaga
gatcagttggaaaccttggtcagcccctcgtgctcctgcaagcaagctgaagtctgcgtg
cgagacatcactaaaaagcttggcagccccaaacaacccagcaatccattcctggaaatg
gtcaagttcctgctggagagaattgctcctgtacacatcgacacagaatccatcagtgct
ttgataaaacaggttaacaaatctatagatggaacagctgatgatgaggaggagggcgtc
ctcactgaagaggccatcagagcaggactggagctactcaaggtgctgtcgttcactcac
ccggtgtccttccactctgcagagacctttgagtctcttttgggttgtctgaagatggac
gacgagaaagtcgcagaggctgcgctgcagatcttcaagaacacgggcagcaagatggaa
gagagttttcctcacatcaaatctgttctgctgccagtactgcaggccaaagccaagaga
ggcccccctcgccaggccaagtattccatccactgcatcaactccatgttcaccaacaga
gacacacacttcgcccagatcttcgagcctctgcacaaaggcctggacccggctaacctg
gagcagctcatcactcctctgaccaccctgggtcacctggctcagctggccccagaacag
tttgctgcaccgctcaaatctctagtcgccaacttcattgtgaaggacctgctcatgaac
gacaggatcccgggcaagaagaccaccaaactttgggtccctgacgaggaagtgtccccc
gagactctggccaagatccagggcataaagctgatggtgcggtggttactgggagtgaag
aacaaccagagcaaatcagggaactccaccctgaggatgctgacagcgattctacacagt
gatggagacttaacagagcagggcaggatgggtaaacccgacatgtcgaggctgcggctg
gcggcggcgtgcgccctgctgaagctggcccaggagccctgctaccacgaaatcatcacg
ctggagcagtatcagctgtgtgcgctcgtcatcaatgatgagtgctaccaggtgcgtcag
tgtttttcccagaagctccaccggggcctgtgccgcctgcgcctgcctctggagtacatc
ggagtgttcgcgctgtgtgccaaggaccccgtgaaggagaggagggctcacgctcgccag
tgcctggtgaaaaacatcaacatacggcgagagtacctcaaacagcatgctgccatcagc
gacaagctgttctctctcctgcccgagtatgtggtgccctacaccatccacttgctggcc
cacgacccggactacgtcaaagtacaggacatcgagcagctcaaagaaattaaagaggct
ctgtggtttgtcctggagattatcatggccaagaacgagaacaacagccacgctttcatt
aggaaaatggtggaaaatatcaaacagacgaaagatgcccaggcccccaccgaccccaaa
accaacgagaaattgtacacagtgtgtgacgtagccatgaacatcatcatgtcaaagagc
accacctacagcctggagtctcccaaagaccccgtgctgccctcaaccttcttcaccaag
gccgacaagaatttcaacaacacaaaaaattatctcccaccagagatgaagtcattcttc
acaccaggaaaacccaagtcggctaacgtgttgggcgcagtcaacaagccgctggcggcg
gcggggaaacagatccagagcaaagcgtctcgtatggagaccgccagcaacgaggactcc
tcgtccaacccggggtccccgcaacgcagcaagaccaggcttgacagcacagaactggat
cacagtgaaaacgaggacttcagcctaaagagagcagacggcactgataaggatattgaa
aagccccgcggtcgcaagcgtgtcgtggcctccattgaagaccaggacaacaaaccaaag
cgcggacgcaagaaggcggcggcaaacacaaccccagtggccgagtccgaggaccaatgg
gacgaggacaatcggccggaggacgagcagaacagcccgccgaagaaaggacgcaggggg
cgacccccgaagtctgccacccccagtcaagacactcctgccaagggcaagagaggccgg
aagaaggcagctcctcccccggaagaggaggaagaggaggaggaggaagaagaagagaag
attgaggaggaggaaccagcagaagacgaagaagctgacaagagcagtgaaaatgtggag
ttgaagaccaagggaggaaggccagcaaggacgccacggcgatcacaaggcagcacggag
tcagcagagtccacaccgcagaagaggagaggacgtccacccaaatcagctcaaccgcct
gcaaagaaaccagcgcgtggtgggcgatcgaaggcagctgctgcgaaagatgacccggag
gaagaagaagaagatgatgaggagcaggaggagcaggaggagcaggaggagcaggaggac
gtgccaacaccgaagggtcgcaagaaggcagctgtgcgaagaagatga
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