Pseudochaenichthys georgianus (South Georgia icefish): 117458560
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Entry
117458560 CDS
T09629
Symbol
sec24a
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117458560 (sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117458560 (sec24a)
Membrane trafficking [BR:
pgeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117458560 (sec24a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
117458560
NCBI-ProteinID:
XP_033955019
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All DBs
Position
14:11010224..11032425
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AA seq
1154 aa
AA seq
DB search
MSTAGFNSQNGTGTGQTYTNGPSQNPVAVQQLPGGSYGMTQQPTYNPMQAKAPAPLGPGL
YPSGPYQPAPPVSSYQHAPPVSSYQPAPPGQPLMTRPLLGGPPSHTPPQSASPGLRLPPP
QATPPPPAMSSSNYYPNPQQPQHMPPAWQYNNAPPPMGSPSSMGTPPRGAMANHVYPAAS
STAPLLPPSSAAYSSAPAAHVSHSGAQPPGPGSPPTSLHGYIQPGTAPPPMNPMAPNTYQ
PSRASYGPPPTGPPPTMKPTAPPTGPPMANVKPPPPDAQCGGAVNSTLPPTEPDCQDGDI
ECPGTMAGNGPQASNSHNHVDNKMAGMPQHGPPGRHLGHYPSLPPGYQNSPAPHNAPPPM
HPALQAATQPYTQAHQPYQQPPGGPGPAQQLSPSLAAMSLQSNTPESLRVVNLLQERNLL
PPSPTPPPTPCLPQDLQKINCNPEVFRSTLTSIPQTQSLLNKAKMPLGLMLHPFKDLSQL
PVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCHRVNDVPEEFMYNPVSRSYGEPHKR
PEVQNATIEFIAPSEYMLRPPQPAAYLFVLDVSHNAVETGYLNVFCQSMLENINALPGDS
RTKVGFITFDSTIHFYNLQEGLSQPQMLIVSDIEDIFLPTPDSLLVNLNECKELVQDLLK
SLPTLFQKTMETQSALGSALQAAFKLLSPTGGRMTIFQTQLPNLGVGALQSREDPNQRAS
AKDIQHLSPATDFYKKLALDCSGQQVSVDLFLLSSQYCDLASLGCISRYSAGTVYYYPSY
HHQRNPAQVECFQKDLKRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNV
NPDAGFAVQMSIEENLDDLQVVSFQAALLYTSSKGERRIRVHTLCLPVVNSLSDIFAGAD
VEAISGLLACMAVDRSATASLSDARDAMTNAAIDSLTSYRQSVLTIQQPGLLAPACLRLF
PLFILALLKQKAFRTGTSTRLDDRVFAMLQLKYQPLVYSLLMIHPALYRVDDLTDEGALN
INERTIPQPRVLQLSVEKLSREAAFLMDAGTVMYLWIGRNCHPNFLSQVLGVPSYAAVPD
NLYLLPELDTAESQRTRAFIGWLRDQRPFFPPMHVIREESQLKPTFMQNMIEDRTESALS
YYEFLLHLQQQISK
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgcagggtttaactctcagaatgggaccgggacaggacagacatacacgaat
ggtccgtcacagaatccagttgctgtgcagcagcttccagggggcagctatggaatgact
caacaaccaacctacaatccaatgcaggccaaagctcctgcacccctcggccctggactc
tacccctctgggccctaccaacctgctcccccagtcagctcctaccaacatgccccccct
gtcagctcctaccaaccagctcctccaggccagccgctgatgaccagaccgctgttggga
ggtcctccatcccacaccccccctcagtctgccagccctggtttgaggttgccccctcca
caggccacacctcctcctcctgctatgtcttcaagtaactattaccctaacccccagcag
ccccagcacatgcctccagcatggcagtacaacaacgctcccccaccaatggggtcaccc
tcttctatgggcacccctccccgtggcgccatggctaatcatgtgtacccagctgcaagc
tcgacagcgccgctgctgccaccgtcatcggcagcttacagctctgcaccggcagcccat
gtttcccatagtggcgcacagcctccaggcccaggcagcccccccacctctctgcatgga
tatatccagccaggcacggcacctccacctatgaatcccatggctcctaacacataccaa
ccaagcagagcatcctatggccccccacctacaggcccaccaccaaccatgaaacccaca
gcccctcccactggaccgccaatggccaatgtcaaacctccaccccccgatgctcagtgt
gggggtgccgttaacagcactttgccccccactgagcccgactgccaggacggggatatt
gaatgtccagggaccatggctggcaatggcccacaagcatcaaacagccataatcatgtt
gacaacaaaatggctggcatgcctcagcacggtccaccgggtcggcacttgggccactac
ccctccctcccccctgggtaccagaacagcccggctcctcacaatgcccccccacccatg
caccctgcgctgcaggccgccacgcagccttacactcaagcacatcagccgtaccagcaa
ccgcctggtggccccgggcccgcccagcagctgagcccgtccctagcagccatgagcctc
cagtccaacaccccagagtccctgagggtggtcaacctgctgcaggagaggaacctgcta
cccccgagccccaccccccctccgacaccctgccttccacaggacctgcagaagatcaac
tgcaacccagaggtttttcgtagcacgctgactagcatccctcagactcagtcgctgctc
aataaagctaagatgccgctgggcctgatgcttcacccctttaaagacctctcgcagctt
cctgtggtgacatccagcaccatcgtccggtgtcggtcctgcagaacctacatcaacccc
ttcgtctcgttcctggaccagaggaggtggaagtgcaacctgtgtcatcgggtcaatgat
gttccagaggagtttatgtacaacccagtcagcagatcgtacggagagcctcacaaaaga
cccgaggtccagaacgccaccatcgagttcattgctccttccgaatacatgctgagaccc
ccccagcctgcagcttacctcttcgttctcgacgtatcccacaatgcagtggaaacaggc
tacctgaatgtgttctgccagtcaatgctggaaaacatcaatgcgcttcctggagactct
cggacaaaggtaggtttcatcacctttgacagcaccatccacttctacaacctccaggag
ggactctcacagcctcagatgctcatcgtgtcggacatcgaagatatctttttaccaaca
ccagacagccttctagtaaacctcaatgaatgcaaagagcttgtgcaggatctgctgaag
agcctccccactttgtttcaaaagacaatggagacccagtccgccctgggttcagctctg
caagcagccttcaagctgctgtcgcccaccggagggcgcatgaccatctttcagacccag
ctgccgaacctcggtgtgggggcccttcaatccagagaagaccccaaccaacgggcatct
gccaaggatatccagcacttatccccagcgacagacttctacaagaagctggctctggac
tgctccggccagcaggtgtcggtggacctgttcctgctcagctctcagtactgcgacctg
gcatcgctcggctgcatatccagatactctgcagggactgtttactactacccatcctac
caccaccagcgcaaccccgcccaggtggagtgcttccagaaggatctgaagagatactta
accaggaagatcggcttcgaggccgtcatgaggatacgctgcaccaaaggtctgtccatc
cacacgttccacggaaacttctttgtgcgttccacggatctgttgtcccttcccaacgtg
aacccagacgctggctttgcggttcagatgtccatcgaggaaaaccttgacgacctgcaa
gtcgtctccttccaggctgcactgctctacacgtccagcaaaggagagagaaggatccgt
gtccacaccttgtgtctacctgtggtcaactctctgtcggacatctttgctggagctgat
gttgaagccatcagcgggctgcttgcttgcatggctgtggaccgctcggcaacggccagt
ctgagtgacgccagagatgcgatgaccaacgctgccatcgactcgctgacgtcgtaccgg
cagtccgtgttgaccatccagcagcccggcctgctggcccccgcctgcctcagactcttc
cctctcttcatcctcgccctgcttaaacagaaagccttcaggacgggcaccagcaccagg
ctggatgaccgtgtgtttgccatgcttcagctgaagtaccagccactggtctactctctg
ctgatgatccaccctgctctgtaccgtgtcgacgatctgaccgatgagggagctttgaac
atcaatgagcggaccatccctcagcccagagtgctgcagctgtctgttgagaagctcagc
agggaggcagcattcctcatggatgctggaacggtgatgtatctgtggatcggacggaac
tgccaccccaacttcctctcacaagtcctgggagttcccagctacgctgctgtgcctgat
aacctgtatctgctcccagagctggacacggccgagtcacagagaactagagctttcatc
ggttggctgagggatcagaggcccttcttccccccaatgcatgtcatcagggaagagagc
cagctgaaacccacttttatgcagaacatgattgaggaccgaacagagtcggccctgtcg
tactacgagttcctgctccacctccaacagcaaatctccaaataa
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integrated database retrieval system
