Pseudochaenichthys georgianus (South Georgia icefish): 117458602
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Entry
117458602 CDS
T09629
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04082
Neuroactive ligand signaling
pgeo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117458602 (gabra1)
04082 Neuroactive ligand signaling
117458602 (gabra1)
04519 Cadherin signaling
117458602 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117458602 (gabra1)
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
GABA-A
117458602 (gabra1)
SSDB
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
117458602
NCBI-ProteinID:
XP_033955078
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All DBs
Position
14:12360965..12390319
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AA seq
468 aa
AA seq
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MRGPHNATMGGRSRTAFLCLWASLLVSNSVLGGKSSGTNGMTDEQKDNTTVFTKILDSLL
DGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHEMEYTIDVFFRQSWKDERLKFQGPMAV
LRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHL
EDFPMDAHACPLKFGSYAYTQAEVVYVWTRGAEHSVVVAEDGSRLNQYDLMGQHVNSGVV
QSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTV
LTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVV
PEKQKKKKESLLKKNNTTAYPAATATAFAPNIARDPGLATIAKSAPPLPSEPKEEPKPKP
PEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNKNPKLTGMGH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtcctcataacgcaactatgggtggacggagcaggacggcctttctgtgtctg
tgggcttccttacttgtgtccaacagcgttctaggtgggaaaagctctgggacgaacggc
atgacagatgaacagaaagataacactacagtgttcaccaagatcttagacagccttctg
gatggctatgacaatcgcctcaggccaggactaggagagcgtgtaactgaagtcaagact
gacattttcgtgactagtattgggccagtttcggatcatgagatggagtacactattgat
gtcttcttcagacagagctggaaggatgaaaggttaaagttccaaggccccatggccgtg
ctacgtctcaacaacctgatggccagcaagatctggacccccgataccttcttccacaac
ggcaagaagtccgtggctcacaacatgaccatgccgaacaagctgctgcgaattacagag
gaaggaactctgctgtacaccatgaggcttacagtaagagcagaatgccccatgcacctg
gaagacttcccgatggatgcccatgcttgtccactgaaatttggcagctatgcctacact
caagcagaggtggtgtatgtgtggaccagaggggccgaacactccgtggtggtggcggag
gacgggtccagattaaaccagtacgatttgatggggcagcatgtgaattctggtgtggtg
cagtccagcacaggagagtatgtcgtgatgacaacccacttccacctgaagaggaaaatt
ggttactttgtgatccagacatatctaccctgcatcatgacagtcatcctctcccaagtg
tctttctggctcaacagagagtctgtccctgccaggactgtctttggagtgaccactgtc
ctgaccatgaccactctcagtatcagcgccaggaactccctccctaaagtggcctatgcc
acagctatggactggttcatcgctgtgtgctacgcctttgtcttctcggctctcattgag
tttgccacagtcaactacttcaccaagaggggttatgcctgggatggaaaaagtgtggtg
ccagagaagcaaaagaagaagaaggagtcccttctcaagaaaaacaacaccacagcctac
ccagctgccactgctacagccttcgcccccaatattgccagggaccctggattggccact
attgccaaaagcgcccccccactcccctctgagcccaaggaggaaccaaagcccaaacct
ccagaggccaagaagacctttaacagtgtgagcaagatagacaggattgccagaatagcc
ttcccattgctctttggaacctttaacttggtctactgggcaacttacttgaataagaac
cccaaattaacggggatgggtcactaa
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