Pseudochaenichthys georgianus (South Georgia icefish): 117458645
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Entry
117458645 CDS
T09629
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117458645
04121 Ubiquitin system [BR:
pgeo04121
]
117458645
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
117458645
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117458645
BRITE hierarchy
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
DUF659
Motif
Other DBs
NCBI-GeneID:
117458645
NCBI-ProteinID:
XP_033955130
LinkDB
All DBs
Position
2:complement(6473261..6477565)
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AA seq
680 aa
AA seq
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MEGKSSGPSCSGLNLVAHPRAKSKVWKYFGFDTDADGCILHWKRIYCRVCMSQIAYSGNT
SNLSYHLEKNHPVEFSEFVKSNTDQMREAFATAFSRIKTEPTGTHVQQPSQDTNLRQNLN
YENRRHNDLTIAVINFICEGLYPVSVVEEPTFKTLMSTVDPGYSPPSKSDLALKMLPQMY
CRTRDMVFNELAGVLNCGVTTDLWQSQTQNRTYISLSMHSVNHNSATGFSMTNKCLKTFE
VRDDNTAENITRAMYETFVEWGITHKVIGATTNGSVDIVKACSLLELSVEMPCLGHTVNR
AMDEALQLPRVDSFLGSCRKLVDHFRGPTIYLLRERQKQHGLAQCPLITDRGRSWLATLA
MLQRLKEQQVAVTATLIEGSSSHHFSFDGPDWTFLAGLIEVLQPFKVVANMFTSCRYPTI
SMVRPVLHMLLNTTLKVNEGDLKEIGMAKEVIAKVLSSTYSQNTQLSQEISTFLNIATFL
DPRYKKLPFLSTQERSKVESNIIEEAKAILEKQIGERPCVEDFSVVSDEPPSKRPHRESA
GSATQENPLAAIFCQSDADQSQEELHAQVVEELSNYKSQRVLGLNEDPLLWWSSHALLFP
TLPKVLQKYWCVPATSVPCHRLLSSSGTVLCGKRNRIAPALVDHQVFLYENSRSYYEPEP
CEDDLDNVWEGNCSLGPPVE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaaaagttcaggaccttcatgctctggcctcaatctggtagctcacccacgg
gcaaaaagcaaagtctggaaatactttggcttcgacacagatgcagatggctgcattctg
cactggaaacgaatatactgtcgagtatgtatgagtcaaatagcttactctggaaacacg
tccaatctttcgtaccacctggagaagaaccaccctgtggagttcagtgagtttgtgaag
agcaacacggatcagatgcgcgaggcgtttgccacagcattctccaggataaagaccgag
cctacaggaacacacgttcagcaaccatcccaggacaccaacctaaggcagaacctaaac
tatgaaaacagacgacataatgatctgacaatagccgtcatcaacttcatctgcgagggg
ttgtaccctgtatctgtagtggaagagcctactttcaagaccttgatgagcaccgtcgat
cctggatactccccaccgagcaagagcgacctggcactgaagatgcttcctcagatgtac
tgccgaacccgggacatggtgtttaatgagcttgctggggttctgaattgtggggtcact
acagacctctggcaaagccaaacccagaacaggacatacatctccctctcaatgcattca
gttaatcacaacagtgcaactggtttctccatgaccaacaagtgccttaaaacgtttgaa
gtgcgggacgacaacacagctgagaacatcaccagagcgatgtatgaaacctttgtggaa
tgggggataactcataaagtcatcggggccaccacaaatggttctgtggacatagtgaaa
gcatgctctctcctggagctgtcagtagaaatgccgtgccttggacacaccgtcaatcgc
gccatggatgaagcgctccagctgccgcgagtcgacagctttttgggaagttgcaggaaa
cttgttgatcactttagaggaccgacaatctacctgctgagggagagacagaagcagcat
ggcctcgctcagtgcccactcatcacagacaggggcaggtcttggttggccacgttggcg
atgctacaaagactgaaggagcaacaggtggctgtaacggcaacactgatcgagggctcc
agcagccatcatttcagcttcgatggccctgactggacctttttagcgggcttgattgaa
gtgctccagccttttaaagtagtggcaaatatgttcacttcctgcaggtacccaaccatt
agcatggtcaggccagtgcttcatatgttgttgaacaccacccttaaggtcaatgaaggg
gacctcaaagagatcggcatggccaaagaagtcatagcaaaggtcctatcaagcacttat
tcacaaaacacacagctgtcacaagaaatctcaacgttcctgaacatcgctacgttcctg
gatccccggtacaaaaagcttcctttcctgtccacacaggagcgctccaaggtggagagt
aacatcatagaggaggcgaaagcaatcctcgagaagcagattggagagcggccatgcgtt
gaagatttctccgtggtgtctgacgagccaccgagcaaaaggcctcacagagagtccgcc
ggcagcgcaacccaagagaaccctttggccgccatattctgtcagtccgatgcagaccag
agccaggaggagctgcacgcacaggtggtggaggagctgagcaactacaaatcacagaga
gtcctgggtctgaatgaagaccctctgctgtggtggtccagccatgctctcttgttcccc
accctccccaaggtgctccagaagtactggtgtgttcccgccaccagtgtgccatgccac
cggctgctgagctcctctgggacggttctgtgtgggaagaggaaccgcatagctccagct
ttagtggatcaccaggtcttcctgtacgagaactcgcggagctactatgagcctgagccc
tgtgaggatgacttggacaatgtttgggaaggaaactgtagtctcggtccgccggtggaa
tga
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