Pseudochaenichthys georgianus (South Georgia icefish): 117458653
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Entry
117458653 CDS
T09629
Symbol
nova1
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117458653 (nova1)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117458653 (nova1)
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
117458653
NCBI-ProteinID:
XP_033955136
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All DBs
Position
14:33027475..33050724
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AA seq
500 aa
AA seq
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MIMMAGGVGAAVDHNGIYSNANLHSLQQTEADNPDSRKRPLETPLEEAGCTKRTNTGEEG
EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA
LNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGA
TVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLN
ISYSNVSGPVANSNPTGSPYANTAEVMPNAAAAAATASSLLGQAGLTGMGAFPATMSTFS
GNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAAAAAANLLASYAS
DVSGGVGHPGVGLGGFSLGSLAAATGASNGYLNASSPLMASSLLAAEKLGDGAKDVVEIA
VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYL
ISQRITYEQGVRATNPQKVG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgatggctggtggtgtcggagcagctgtggaccataacggaatttactccaac
gcaaacctccacagcctgcagcagaccgaggctgataacccggactctcgcaagcgaccg
ctggagactccgctggaggaggccggctgcaccaagcgcaccaacactggagaggagggc
gagtacttcctgaaggtgctgatccccagctatgcagccggctctataattggcaagggt
ggccagaccatcgtacaactgcagaaagagacgggtgccactattaagctgtccaaatcc
aaagacttctacccaggcacaacagaacgtgtctgtctgatacagggtacagtcgaagcc
ctcaatggcgtccataacttcattgcggagaaagtccgcgagatgccccagagcgctcaa
aaacctgaaccagtcagcatactgcagccgcagaccacggtcaaccccgaccgcgtcaaa
caggcaaaattgattgtgcccaatagcacagctgggctgatcattggcaagggtggagcc
acggtgaaagccgtgatggagcagtcaggggcttgggtgcagctctcccagaagccagag
ggcatcaacctgcaggagcgggtggtaaccatcagtggggaacctgaacagaaccgcaag
gcagtagagatcatagtacagaagatccaggaggaccctcagagcagcagctgcctcaac
atcagctattccaatgtctcgggccccgtggccaactccaaccccaccggctccccctac
gccaacacagccgaggtgatgcccaatgcagccgcagccgctgctaccgcctccagcctt
ctgggccaggccggcctgacaggaatgggtgccttccccgccaccatgtccaccttctct
ggcaacgatctgctggccatcacctcagccctcaacacgctggccagctacggctacaac
accaacaccctcggcctgggcctcaaccctgcagctgcctctggggtccttgctgcagtc
gcagctagcgccaacccggctgctgctgctgcagctaacctgctagcctcctacgctagt
gatgtgtccggtggtgtgggccacccgggtgtgggcctcgggggattctccctgggttct
ctagcagctgctacaggggcttccaatggttacctaaatgcttcatccccactgatggcc
tcctccctattggcagcagagaagctgggggatggggccaaggacgtggttgagattgct
gtgcccgagaatctggttggtgccattttggggaaaggagggaaaacgctggtagaatac
caggagctaacaggagcccgcatccagatctccaaaaagggagagttcattcctggtact
cggaaccgtaaagttaccataacagggtcgccagccgctacgcaagcagcgcagtatctg
atcagccagcggatcacttacgagcaaggcgtgcgcgctaccaacccacaaaaggtgggc
taa
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