Pseudochaenichthys georgianus (South Georgia icefish): 117458677
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Entry
117458677 CDS
T09629
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117458677 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117458677 (runx1)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
117458677 (runx1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
117458677
NCBI-ProteinID:
XP_033955180
LinkDB
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Position
2:complement(6287291..6317807)
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AA seq
503 aa
AA seq
DB search
MNPGAFSSSGPLSWAMYLMRKGRTGSGLFDPAPGRRYTPPSTTLASGGKMAEALPLGAQE
AGGGASLVGKLRMADRGMVEVISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
LGDTPDGTLVTVMAGNDENFSAELRNATAALKNQVARFNDLRFVGRSGRGKSFTLTITVF
TNPPQVATYQRAIKITVDGPREPRRHRQKMDEVKPGTLAFSERLTELEQLRRSSMRLTPP
HHHHHQHPANSRQSAALNSAAFSSPAHAQITADSRQMQSSPSWSYDQSYPYLGQITTPTV
HTANPLSPGRSTLSDLSSRLTGPDLTAFGDHRMTLERPFTSHPSLPDSRFSDPRVHYPST
ATAFTYAPSHNAVSNGTLGLSMATAMANTPAGRYHTYLPPPYPANTPHQGQNGPFQSTSS
PYHLYYSTTAGSYQFSMMAGGGGGTDSRSPPRILPPCTNASTGSSLLHPSLPNQNEGVGV
EVESSHSSSPTNMAAAESVWRPY
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctggggcattctccagctctggccccctgtcctgggccatgtacctgatgagg
aaaggccggacaggcagcggactctttgacccagcccccggccggcgttacacccccccc
tccaccaccctcgcctcgggggggaagatggccgaggccctgcccctgggcgcccaggag
gccggaggcggggcctctctggtgggcaaacttcgtatggctgaccgaggcatggtggag
gtgatctcagatcatccgggggaactggtgaagacggacagccccaacttcctgtgctcc
gtgctacccacacactggaggtgcaacaagaccctgcccatcgcgttcaaggtggttgcc
cttggcgacacccctgacggcaccttggttacggtgatggcgggaaacgacgagaacttc
tccgctgagcttcgtaacgccacggccgccctcaagaaccaggtggcccgattcaacgac
ctgcgctttgtgggccgcagcggaagagggaagagtttcacactgaccatcaccgtgttc
accaaccctcctcaggtggccacgtaccagagagccattaagattacagtggacggcccc
cgagagccaagacgtcatcgtcagaagatggatgaagttaaacccggaacgctggctttc
tccgagaggctcacggagctggagcagctgagacggagctccatgaggttgacgcctcct
caccaccatcaccatcaacaccccgccaacagccgccagtctgcagcgctcaactctgcc
gccttctccagccctgcacacgctcagattactgctgactccaggcagatgcagtcgtct
ccatcttggtcctacgaccaatcgtatccctaccttggccagataaccacgcccaccgtc
cacacagccaatcccctttcgcctggtcgatctacgctcagtgacctgtcctcgcgtctc
acaggtcctgacctcacagcctttggcgaccacaggatgaccttggaacgacctttcacc
tcccacccctccttacctgactcccgcttctcggatccccgggtccactacccctctaca
gccaccgccttcacctacgccccctctcacaacgccgtatccaatggcaccctcggccta
tccatggcgacggccatggcgaacactccagcggggaggtaccacacctacctgcctccc
ccctacccggcgaacaccccccaccagggtcagaacgggcccttccagtccacctcctca
ccgtatcacctgtactattccaccaccgccggatcataccagttctcaatgatggccggc
ggtgggggaggcaccgactctcgctccccgcccaggatcctgccgccgtgcaccaacgcc
tccacaggctcctccctcctgcacccctctttgcccaatcagaatgaaggagtgggggtg
gaggtggagtccagccacagtagctcccccacaaacatggccgctgcagagtccgtctgg
agaccgtactga
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