Pseudochaenichthys georgianus (South Georgia icefish): 117458734
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Entry
117458734 CDS
T09629
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117458734 (tmc6b)
03037 Cilium and associated proteins [BR:
pgeo03037
]
117458734 (tmc6b)
Transporters [BR:
pgeo02000
]
Other transporters
Pores ion channels [TC:
1
]
117458734 (tmc6b)
Cilium and associated proteins [BR:
pgeo03037
]
Other cilia and associated proteins
Stereociliary proteins
117458734 (tmc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117458734
NCBI-ProteinID:
XP_033955302
LinkDB
All DBs
Position
1:17176685..17194014
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AA seq
837 aa
AA seq
DB search
MARNVAFDQNHPLMEAGLESPIDEEGVHDSFSQLIAEQSQNGGASDSDAFELQELQRQLD
EEERDNVAFLSGPGCEFQGRRQRDAECEDADTQADPLIGERWSSATLKILSSMPSRTIGR
NRGAIISQYYNRTMQLRRRRQSRPAIRDFSRSARPSIRGYGIETDSADAEVSKRDRLVNN
LQNLSVSDRIRMLRAMPLNVSEKSELRSLALQKEKRTLSRRIPCCSQLKYYIINGARQGW
YSWLSFLHSLHLWQVPLKRVSGRFGSAVLSYFLFLKTLLFFNVFLFLVTGAFMVLPQALH
PPESSVGRPYFTGLELLTGAGYFSDTVMYYGYYCNYILRKSCRDDGGVHDVSLSNGTMPD
CVSKHLSYNMPLAYFFTIGVSSFLTCIILVYSMSKSFGQSFRIDKSHSILAIKTFCSWDF
KVIKKSSVKLMSENICTQFKELLAEVSHKQVKNTLCQRLWRLMVHGLAWAICVASTTACV
LAIFFCSSHMHQNLQFFLRSGVPVTNPLLNEASLLALPVLVSLINLLLPGLFNLAAWMED
YESPSVRTYVSIGRNLMLKVSVLGVLCYHWLGRVAADPMTIGLKCWETFVGQELYRFLLM
DFIFTILDTLFGEFLWRLFSEKVLKRRRKPVFDIARNVLELIYGQTLAWLGVLFTPVLPA
VQILKLLLLFYIKMSSVMMNCQAPRKPYRVSQMTTVFITLLCFPSFLGASVCVTYTMWSI
TPSSSCGPFRELKTMFQAGKRWVEELEKDNPNLSVLARAHSYLVENPFFLFVGAGIFLIV
IYFHSQVVDGQRKIIGLLQEQIENEGDDKKFLITRLQTIHEQKRTPALRLASQNSNC
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaatgttgcctttgaccagaaccaccctctcatggaagctggactggagagc
ccaatagacgaggaaggtgttcatgactcgttcagccagctgatagcggagcagagtcag
aatggaggagcgtctgactctgacgccttcgagctgcaggagctgcagagacaactggac
gaagaggagcgagacaatgttgccttcctgtcaggccctggatgtgagtttcagggaagg
aggcaaagggacgcagaatgcgaggacgctgacacccaggcggaccccctcataggggaa
cgatggtcctctgcaaccttgaagatcctctcgtccatgcccagccgaacgatcggtcgc
aacaggggcgccatcatctcgcagtactacaaccgcaccatgcagctccggagacgcaga
cagagccgacccgccatccgagacttctcccgctctgccagacccagcatacggggctac
ggcatcgagaccgacagtgcggacgcagaggtgagtaagagggaccgtttggtgaacaac
ctgcagaacctgtcagtcagcgacagaatccggatgctccgagcgatgcctctcaatgtt
tccgaaaagagtgaactcaggagcttagctttacaaaaggagaaacgcacgctttctcgt
cgcattccctgctgcagtcaactcaaatattacatcatcaatggggcgaggcagggttgg
tacagctggctctccttcctgcactccctccatctgtggcaagtgccgctcaagagagtg
agcggacgtttcggcagcgccgtcctctcctacttcctgttcctaaagaccctactcttc
ttcaacgtcttcctgttcctggtgacgggggccttcatggtgctgcctcaggcgttgcac
cctccagagtcgtctgtagggagaccctacttcactggactggagctcctcaccggcgcc
ggctatttctcagatactgtgatgtactatggctactactgtaactacatcctgcgtaag
agctgcagggatgatgggggggtgcacgatgtctctctgtccaatgggaccatgccggac
tgtgtgtccaagcacctgtcctacaacatgccgctggcatactttttcaccataggagtg
tcttccttcctcacctgcatcattcttgtgtacagcatgtcaaagtcgtttgggcagagc
ttccgaatcgacaaatctcacagcatcctggcaataaagaccttctgctcctgggacttc
aaggtcattaaaaaatcttccgtcaaactcatgtctgagaatatctgcacccagttcaag
gagctgctggcagaggtgagtcacaagcaggtgaagaacactctgtgccagaggctgtgg
aggctgatggtccacggcctggcctgggctatctgcgtggccagcaccacggcctgtgtg
ctggccatcttcttctgctctagtcacatgcatcagaacctccagttctttctgcgcagt
ggcgtccccgtcaccaacccgctgctgaacgaggccagtctgctggccctccccgtcctg
gtgtcgctcatcaacctgctgctgcccggcctcttcaacctggctgcctggatggaggac
tacgagtccccgtctgtacgcacatatgtctccatcggcagaaacttgatgttgaaagtg
agcgtgctgggagtcctgtgctaccactggctgggtcgggtggctgctgaccccatgact
attggcctgaagtgctgggagacttttgttggccaggagctttatcgtttcctgctcatg
gacttcatcttcacgatactggacaccttgtttggagagttcctttggaggttgttctct
gagaaggtgctgaagaggaggaggaaaccggtgtttgacatcgccaggaacgtcctcgaa
ctgatctacggacagacgttggcctggttaggtgttctcttcactcctgtcctgcctgca
gtgcagatcctcaaactgttgctgctcttctacattaaaatgagcagtgtgatgatgaac
tgtcaggctcccaggaagccgtacagagtgagccagatgaccaccgtcttcatcacgctc
ctctgcttcccctccttcctcggtgcctccgtgtgcgtcacttacaccatgtggagcatc
accccttcttcatcgtgcggccccttccgagagctcaaaacgatgttccaggcggggaag
cggtgggtggaggaactggaaaaagataatcccaacctgtcggtgctggcccgagctcac
tcctacctggtggaaaaccctttcttcctgtttgtgggagcaggcatcttcctgatcgtc
atctacttccacagtcaggtggtggacggtcagaggaagatcatcggcctactgcaggag
cagatagaaaatgaaggagatgataagaagtttctgatcactcgcctccagacaatccac
gagcaaaaacgaacccccgctctacgactcgccagtcagaactcaaactgttga
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