Pseudochaenichthys georgianus (South Georgia icefish): 117458786
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Entry
117458786 CDS
T09629
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117458786
Cell adhesion molecules [BR:
pgeo04515
]
Cadherins
Protocadherins
117458786
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
7tm_3
Motif
Other DBs
NCBI-GeneID:
117458786
NCBI-ProteinID:
XP_033955344
LinkDB
All DBs
Position
14:complement(30034495..30042995)
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AA seq
995 aa
AA seq
DB search
MDTQGAKKRLFWRWHTVCLFALCTCFLDAVRGQIRYSIPEELEHGAFVGNIAEDLGLDLD
RLSARRFRIVSGSKKQYVEVNLENGVLFVNERIDREELCEQSLSCSFHLQVVIENPLELY
RVEMEIVDVNDNSPSFPWTEFNLDISESATPGSRFPLESAQDLDVGSNSLRTYLLSVNEH
FLLDIQTRSDGSKFAELVLQSPLDREQQSAHQMVLTAVDGGTPERSGTAQIDITVLDAND
NAPVFDQSFYRVRLVENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPIKVRQLFSVDS
RTGEIKVKGVIDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNVLDTNDNLPEVILTSVST
PVQEDAPPGTVIAVISVMDKDSGENGNVDCEIPHHVPFQLHSSFKNYYTLVTSDFLDREA
MAEYNITLTARDMGSPPLFTRKTILVQVSDVNDNAPLFKQPSYTVYLTENNAPGASICSV
TALDPDSGQNAYLSYSILEGDIRGMHVSTYVSINSDNGNIYALRSFDHEQLKNFHITIQA
QDAGFPPLSNNVTVNIFILDQNDNAPVIVSPVVQNSSAPTAAVPKSADAGYLVSKISAVD
ADEGQNSRLFYQMLQATDPSLFSVALYTGEIRTIRQLVEKDPSSHRLVILVKDNGQPPLS
ATVSIILSVVDSLPDSQPDLGDLSLSPHHSPNFSLYLIVSLGAISFTFLVAIIILVSVRR
LKGRASSRESSFPSISCCCCCCCSSSDSSTTEDVFKKTNLNVRMPAGAPGCAEANGNGAL
PQVYCYKMCLTPESSKSDFMFLKPCSPVMSVQQNNAKSTDYLTSGWSAVDRKELANNRAA
SPNELKYASITNDWTLTKNQRNLAYKRYSSANMEGTLTRQQKYDAHGFSCSVAPQYWTWG
SHMNDCKISLQEGTLPHYSWTPKYTQPSSEAADYQHNVYIPGSTSDYSTLKLASRGELDV
YNTFSTFGKKKRFISNYEQAFDIDDSLIVSNDIFK
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggacacacaaggggcaaagaaaagactgttttggagatggcatacagtttgcctattt
gcgttgtgcacttgtttcttggatgcagtccggggacagattcgctactccatccctgag
gaactggagcatggagcttttgttggcaacatcgcagaggacctgggcttggatttggac
aggctctctgcgcgcagattccggatagtctccggttccaagaagcaatatgtggaggtg
aatttggaaaatggagttttattcgtcaatgagagaattgaccgcgaggaactctgcgag
cagagtttgtcctgttctttccacttgcaggtggtcattgaaaaccccttggagctgtac
agggtggagatggagattgtggatgtgaacgacaactcccctagtttcccatggaccgag
tttaatctggacatctcagagtctgctacgccaggatcccgtttcccacttgagagcgca
caggatttagacgtgggatccaactccctgcgcacatatttgctgagtgtcaacgagcat
ttccttttggatatacagacgcgcagtgatggcagcaaatttgcggagctcgtcctgcag
agcccgctggacagagagcagcaaagtgcgcatcagatggtcctgacggcggtggatgga
ggcacgccggagagatctggcactgcgcaaattgatatcaccgttttggatgcaaacgat
aacgcgcctgtgtttgaccagtccttttacagagtgaggctggtggaaaacgcacctaaa
ggcaccgtagtcataaaactcaacgcgtcagatttagatgagggccccaacgctgacatc
acctactcgttcagtggccatgcgcccatcaaggtgcgccagctcttcagcgtggactcg
cgcacgggggaaatcaaagtgaaaggagtgatagactatgaaaaggccaggatgcatgaa
atctatgttcaggctaaagataaaggcccctccgctgtggcagtgcactgtaaagtgctg
gtgaacgtgttggatacaaatgacaacctcccggaagtgatcttgacatcagtgtccaca
cctgtgcaggaggacgcccccccggggactgtgatagctgtcatcagcgtgatggataaa
gactcaggtgaaaacgggaatgtggactgtgagatcccacatcacgtgccattccagctc
cactcctcctttaagaactactacacattagtaacttctgattttctggacagagaggcg
atggctgagtataacatcacactaacagcgcgagacatgggctcccctcctttattcacc
aggaaaactatccttgtccaagtgtctgatgtgaatgataacgcgcctctcttcaaacag
ccgtcctacactgtgtacctgactgagaataacgcgccgggtgcatccatatgctcggtg
actgcactggatccagattctggccaaaacgcgtacctctcctactctatcctggagggg
gacatacggggaatgcacgtgtccacctacgtgtccatcaactcggacaacgggaacatt
tacgcactgcggtcctttgaccacgaacaacttaaaaactttcacatcacaattcaagct
caggacgcagggttcccgcctctgagcaacaacgtgacagtgaacatctttatcctggac
caaaacgacaatgcacctgtgattgtgtcaccggttgtgcaaaacagctccgcgccaaca
gcagcagtgcccaagtcagctgacgcaggttaccttgtctccaaaatcagcgccgtggac
gcagacgagggtcaaaactcgcgtctcttttaccagatgctccaagcaacagacccgagc
ttgttcagcgtggctctgtacacaggcgagatcaggacaattcgccagttggtggagaaa
gacccctcgagccacagattggtcattctcgtgaaggacaatggtcagccgcccctctcg
gccactgtttccatcatcctgtcagtggttgacagcctgccagattcgcagcccgatttg
ggtgacctgtcactaagcccgcatcacagccctaacttcagcctgtacttaatcgtgtct
ctgggcgcaatctccttcacatttctggtggctatcatcatcctggtgtcagtgcgcagg
ctgaagggaagagcgtccagcagggagtcaagcttcccctccatcagctgctgctgctgc
tgctgctgctccagctcagattcctccaccacggaagatgtgttcaaaaagaccaatctg
aatgtccggatgcccgcaggagcacccgggtgcgcagaggcaaacggcaatggagctctc
cctcaggtctactgctataaaatgtgtctgactccggagtcgtccaaaagtgacttcatg
ttcctgaagccctgtagcccggtgatgtcagttcagcagaataacgccaagagcacggat
tacctcacctctggctggagcgcagtggaccgtaaagagctggccaacaacagagcagcg
tccccaaacgagcttaagtatgcaagtattaccaacgactggaccttgaccaagaaccaa
cgcaacttggcatacaagaggtatagttcagcaaatatggagggaactcttacccgtcaa
cagaaatacgatgcccatgggttttcctgttctgtggctccacagtattggacctgggga
agccatatgaatgactgcaagatatctctccaggaggggacactccctcactactcatgg
actccgaagtacactcagccgagttctgaagcggcagactaccagcacaacgtgtacata
cccggctccacgtccgactacagcactctgaagctggcttccagaggagagctggatgtc
tacaacaccttctctacctttgggaagaaaaagagattcatctcaaactatgaacaagct
tttgacatcgatgatagtctcatcgtgagtaatgacatcttcaaatga
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