Pseudochaenichthys georgianus (South Georgia icefish): 117458786
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Entry
117458786 CDS
T09629
Symbol
pcdh1g32
Name
(RefSeq) protocadherin 1 gamma 32
KO
K28836
protocadherin-10, delta 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117458786 (pcdh1g32)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117458786 (pcdh1g32)
Cell adhesion molecules [BR:
pgeo04515
]
Cadherins
Protocadherins
117458786 (pcdh1g32)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
117458786
NCBI-ProteinID:
XP_033955344
LinkDB
All DBs
Position
14:complement(30034482..30044671)
Genome browser
AA seq
1016 aa
AA seq
DB search
MCVCVQERERGTSDREIISFVCLIPKCGGCVPLSQLLICLFALCTCFLDAVRGQIRYSIP
EELEHGAFVGNIAEDLGLDLDRLSARRFRIVSGSKKQYVEVNLENGVLFVNERIDREELC
EQSLSCSFHLQVVIENPLELYRVEMEIVDVNDNSPSFPWTEFNLDISESATPGSRFPLES
AQDLDVGSNSLRTYLLSVNEHFLLDIQTRSDGSKFAELVLQSPLDREQQSAHQMVLTAVD
GGTPERSGTAQIDITVLDANDNAPVFDQSFYRVRLVENAPKGTVVIKLNASDLDEGPNAD
ITYSFSGHAPIKVRQLFSVDSRTGEIKVKGVIDYEKARMHEIYVQAKDKGPSAVAVHCKV
LVNVLDTNDNLPEVILTSVSTPVQEDAPPGTVIAVISVMDKDSGENGNVDCEIPHHVPFQ
LHSSFKNYYTLVTSDFLDREAMAEYNITLTARDMGSPPLFTRKTILVQVSDVNDNAPLFK
QPSYTVYLTENNAPGASICSVTALDPDSGQNAYLSYSILEGDIRGMHVSTYVSINSDNGN
IYALRSFDHEQLKNFHITIQAQDAGFPPLSNNVTVNIFILDQNDNAPVIVSPVVQNSSAP
TAAVPKSADAGYLVSKISAVDADEGQNSRLFYQMLQATDPSLFSVALYTGEIRTIRQLVE
KDPSSHRLVILVKDNGQPPLSATVSIILSVVDSLPDSQPDLGDLSLSPHHSPNFSLYLIV
SLGAISFTFLVAIIILVSVRRLKGRASSRESSFPSISCCCCCCCSSSDSSTTEDVFKKTN
LNVRMPAGAPGCAEANGNGALPQVYCYKMCLTPESSKSDFMFLKPCSPVMSVQQNNAKST
DYLTSGWSAVDRKELANNRAASPNELKYASITNDWTLTKNQRNLAYKRYSSANMEGTLTR
QQKYDAHGFSCSVAPQYWTWGSHMNDCKISLQEGTLPHYSWTPKYTQPSSEAADYQHNVY
IPGSTSDYSTLKLASRGELDVYNTFSTFGKKKRFISNYEQAFDIDDSLIVSNDIFK
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtatgtgtgcaagagagggagagggggacgagtgacagagagataatctctttt
gtatgtttgatccctaaatgtggtggttgcgtccccttatcccagctacttatttgccta
tttgcgttgtgcacttgtttcttggatgcagtccggggacagattcgctactccatccct
gaggaactggagcatggagcttttgttggcaacatcgcagaggacctgggcttggatttg
gacaggctctctgcgcgcagattccggatagtctccggttccaagaagcaatatgtggag
gtgaatttggaaaatggagttttattcgtcaatgagagaattgaccgcgaggaactctgc
gagcagagtttgtcctgttctttccacttgcaggtggtcattgaaaaccccttggagctg
tacagggtggagatggagattgtggatgtgaacgacaactcccctagtttcccatggacc
gagtttaatctggacatctcagagtctgctacgccaggatcccgtttcccacttgagagc
gcacaggatttagacgtgggatccaactccctgcgcacatatttgctgagtgtcaacgag
catttccttttggatatacagacgcgcagtgatggcagcaaatttgcggagctcgtcctg
cagagcccgctggacagagagcagcaaagtgcgcatcagatggtcctgacggcggtggat
ggaggcacgccggagagatctggcactgcgcaaattgatatcaccgttttggatgcaaac
gataacgcgcctgtgtttgaccagtccttttacagagtgaggctggtggaaaacgcacct
aaaggcaccgtagtcataaaactcaacgcgtcagatttagatgagggccccaacgctgac
atcacctactcgttcagtggccatgcgcccatcaaggtgcgccagctcttcagcgtggac
tcgcgcacgggggaaatcaaagtgaaaggagtgatagactatgaaaaggccaggatgcat
gaaatctatgttcaggctaaagataaaggcccctccgctgtggcagtgcactgtaaagtg
ctggtgaacgtgttggatacaaatgacaacctcccggaagtgatcttgacatcagtgtcc
acacctgtgcaggaggacgcccccccggggactgtgatagctgtcatcagcgtgatggat
aaagactcaggtgaaaacgggaatgtggactgtgagatcccacatcacgtgccattccag
ctccactcctcctttaagaactactacacattagtaacttctgattttctggacagagag
gcgatggctgagtataacatcacactaacagcgcgagacatgggctcccctcctttattc
accaggaaaactatccttgtccaagtgtctgatgtgaatgataacgcgcctctcttcaaa
cagccgtcctacactgtgtacctgactgagaataacgcgccgggtgcatccatatgctcg
gtgactgcactggatccagattctggccaaaacgcgtacctctcctactctatcctggag
ggggacatacggggaatgcacgtgtccacctacgtgtccatcaactcggacaacgggaac
atttacgcactgcggtcctttgaccacgaacaacttaaaaactttcacatcacaattcaa
gctcaggacgcagggttcccgcctctgagcaacaacgtgacagtgaacatctttatcctg
gaccaaaacgacaatgcacctgtgattgtgtcaccggttgtgcaaaacagctccgcgcca
acagcagcagtgcccaagtcagctgacgcaggttaccttgtctccaaaatcagcgccgtg
gacgcagacgagggtcaaaactcgcgtctcttttaccagatgctccaagcaacagacccg
agcttgttcagcgtggctctgtacacaggcgagatcaggacaattcgccagttggtggag
aaagacccctcgagccacagattggtcattctcgtgaaggacaatggtcagccgcccctc
tcggccactgtttccatcatcctgtcagtggttgacagcctgccagattcgcagcccgat
ttgggtgacctgtcactaagcccgcatcacagccctaacttcagcctgtacttaatcgtg
tctctgggcgcaatctccttcacatttctggtggctatcatcatcctggtgtcagtgcgc
aggctgaagggaagagcgtccagcagggagtcaagcttcccctccatcagctgctgctgc
tgctgctgctgctccagctcagattcctccaccacggaagatgtgttcaaaaagaccaat
ctgaatgtccggatgcccgcaggagcacccgggtgcgcagaggcaaacggcaatggagct
ctccctcaggtctactgctataaaatgtgtctgactccggagtcgtccaaaagtgacttc
atgttcctgaagccctgtagcccggtgatgtcagttcagcagaataacgccaagagcacg
gattacctcacctctggctggagcgcagtggaccgtaaagagctggccaacaacagagca
gcgtccccaaacgagcttaagtatgcaagtattaccaacgactggaccttgaccaagaac
caacgcaacttggcatacaagaggtatagttcagcaaatatggagggaactcttacccgt
caacagaaatacgatgcccatgggttttcctgttctgtggctccacagtattggacctgg
ggaagccatatgaatgactgcaagatatctctccaggaggggacactccctcactactca
tggactccgaagtacactcagccgagttctgaagcggcagactaccagcacaacgtgtac
atacccggctccacgtccgactacagcactctgaagctggcttccagaggagagctggat
gtctacaacaccttctctacctttgggaagaaaaagagattcatctcaaactatgaacaa
gcttttgacatcgatgatagtctcatcgtgagtaatgacatcttcaaatga
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