Pseudochaenichthys georgianus (South Georgia icefish): 117458859
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Entry
117458859 CDS
T09629
Name
(RefSeq) roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117458859
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
ROBO family
117458859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
PKD
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
117458859
NCBI-ProteinID:
XP_033955444
LinkDB
All DBs
Position
14:complement(30817934..30945692)
Genome browser
AA seq
1549 aa
AA seq
DB search
MMPACLTGIYCLLAFLHICSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTP
TVEWYKDGERVETDRDNPRSHRMLLPSGSLFFLRIIHGRRSKPDDGSYVCVARNYLGQAI
SHNASLEVAILRDDFRQNPVDVMVAVGEPAVLECQPPRGHPEPTISWRRDGSNLDDRDER
ITIRSGKLMITNTRKSDAGKYICVGTNMVGERESEIAELTVLEHPTFVKRPSSVVALAEE
SVEFHCVVQGDPVPTVRWRKDDSDLPKGRSEIQEDHTLIVRQVTYSDVGSYTCVVENMVG
KSESSATLTVHVPPAFAIHPRNQVVGVGRTVTFHCEATGNPQPAIFWQREGSESLLFSNH
PPQPYSRLSVSQMGSLTITDVQRSDGGFYSCQALNIAGSVIIKALLEVTDSGSDYPPPVI
RQGPVNQTIAVDSTVLMGCQTADSPPPTVHWKKDGVVMSPSDSRMSITDSGSLEIRYSKL
GDTGFYTCVASSPNGEASWTAYLQVEEFGVVVQSSEPFDPSLIPSAPSKPEVTDISRTSV
TLSWKSDTNNGAKPTYYLIEAFSYTSGSRWVTLAEHINTQTFVLRNLKPATVYLFMVRAV
NAYGLSDPSPISDSIRTQDSTSTMQGVDHRHIQRELGDVVIHLHTPTVLSSSAVRVQWNV
EQQSPYIQGYKVLYRASAEHGQPEGQWSVLEVHAPREEGVVLGQLKRGSIYEFKVRPFFD
EFQGADSEVKVVRTLEEAPRRAPQGVTVTKSDANGSAILVAWKPPREQDDAGVIQEYKIW
CLGNESRYHVNQSVDGSTFSVLISTLTPGIRYSVEVAASNGAGAGVKSDVTFFQLDSAGQ
MMDSEERDTLSQISDVVRQPAFIAGIGATCWLVLMIFSVWLYRHRKKRSGLSSTYTGIRK
VPSFTFTPTVAYQRGESACGAGRPGLLSMGEPLNQLWLPDNWPNACANHKDCSINCCNNG
NGTSDSNMTTYSRPADCIANYGGHPENKQLGPETAIYSDVNISNKLNDIKTFNNSSLCYA
SPGGDPAATYEPIPYATTQLIQASIKSKAAAGGALAETMDMHCWKQPPNPPPIPKEMMAQ
MQYNIIEQNLLNKDHLQGSEGMIHPKTIPYNQSRDHSTGGSHHSSDRGSNSTAGSQNQKK
GTRGPKILKHNAVSWGEAPPPPHANAWDCDEYSLPMERSFDPDGRIEGCPTPPVRGATSS
PPVVSYSHPPNTQGDLSNGLHNGAQHLSQHLSSHARPLSPTHTYSSIPFCMDTDGQEEEE
SEEEADEEADEETDAEPAESHYSQHHNRQKHKHQLHPPSPHKLLLHGLEQTPASSTGDLD
RSVTGSMVNSWGSASEDNISSGRSSVVSTSEGSFFTDGDFNQAALSLRENAGLRIGRYPE
ESGRRPQRPSSPMSTDSNMSPAITHKRPRRHKQNQSGHQDYQPKDVFNDDSCTPLSFSSQ
MSHGEYIARGATLPRVGSGEARGRRGSTGTHKVREAAEGQEKHKTPPGGKGSSKSRQHSE
LGDVLLYSRPAFPSGHAQREPDDTHPSSFMSCGDSRTKPGGQVEEFLKS
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgcgtgtctgacggggatttactgtctactggcatttctacacatttgttca
gggtctcgtcttcgccaggaagacttccctccccgcattgtggagcacccctctgacctc
attgtgtccaaaggggaaccagccactctcaactgtaaggccgagggccgcccgaccccc
acggtggaatggtacaaagacggcgagcgcgttgagactgaccgcgacaacccccgctcc
caccgtatgctgctgcccagcggctccctcttcttcctgcgtatcatccacgggcgacgg
agcaagcccgacgacggcagctacgtgtgcgtggcccgaaactatctgggccaggccatc
agccacaacgcgtccctggaagtagccattttgcgcgatgacttcagacagaacccggtg
gacgtcatggtggcagtgggtgagccggccgtgctggagtgccaacccccccgagggcac
cctgaacccaccatctcctggaggagagatggttccaacttagatgacagagatgaacgc
atcacaatccgcagtggcaagctgatgatcaccaacaccaggaagagtgatgcggggaag
tacatctgcgttggaaccaacatggtgggagagcgggagagtgagatcgctgaactcact
gtgctagagcacccaacctttgtgaaacggcccagcagtgtggtggcgttggcggaggag
agcgtggagttccactgtgtggtacaaggagaccctgttcccactgtccgctggaggaag
gacgactctgacctgcctaagggccggtctgaaatccaagaggaccataccttgattgtt
cgccaagtgacctattctgacgtgggctcgtacacatgtgtggtggagaacatggttggg
aagtctgaatcatccgccacgctcactgtccacgtgcccccagcgtttgccatccacccc
aggaaccaggtggtgggggtgggcaggacggtcaccttccactgcgaggccactggcaac
ccacagcccgctatcttctggcagagggagggcagtgagagtctgctgttctccaaccat
ccgccgcagccctatagccgtctgtctgtgtcccagatgggcagtttgaccatcaccgat
gttcagcgctctgatggaggcttctacagctgccaggctctcaacatcgccgggagtgtc
ataatcaaagcgctgctggaggtcacagactctgggtcagactaccctcctccagtgatt
agacagggcccagtcaatcagaccattgcggtggacagcacagtgctcatgggctgccag
acagctgactctccacccccgacagtccactggaagaaggatggtgtggtgatgtcgcct
tcagactcccgcatgtccattaccgactcaggatctctggagattcgttactctaagctt
ggagatacaggcttctacacttgtgtagcttctagtcccaacggagaggcctcctggaca
gcgtacctacaggtggaggagtttggagttgttgttcagtccagtgagccgtttgacccc
agcctaattcctagtgctccatccaaacctgaggtgactgacatcagccgcacttctgtg
actctgtcgtggaagtcggacaccaataatggcgcgaaacctacatattacctcatcgag
gcattcagttatacgtcgggcagcagatgggtgaccctagctgagcatataaatacccag
acctttgtgctgaggaacctgaagcctgcgactgtctacctcttcatggtcagagcggtg
aatgcttacggcctcagcgaccccagcccaatctccgactccatcagaacacaggacagc
acgtccaccatgcagggagtggatcaccgtcacatccagagggagctgggtgacgtggta
atccacctgcacacaccaaccgtcctctcctcttctgctgtcagggtgcagtggaatgtc
gagcagcagtccccgtacatccagggctacaaggtgctgtacagggcgtctgctgagcac
gggcagccggaggggcagtggagcgttctggaggtgcacgccccccgggaggagggggtg
gtgctcggtcagctgaagagagggtccatctatgagttcaaagtgcggcccttcttcgat
gagttccagggagccgacagtgaggtgaaagtggtccggacgctggaagaagccccgaga
agagcaccccagggtgttacagtgacaaagagtgatgccaatgggagcgccatcctcgtt
gcttggaaaccacctcgagagcaagatgatgctggagtcattcaggaatacaagatctgg
tgtctgggtaatgagagtcgctatcatgtgaaccagtctgtggacggctccaccttctcc
gtgctgatctccactctcacgccgggaatccgctacagcgtagaagtggcagcaagcaac
ggtgctggagctggggtcaagagtgatgtcaccttttttcaattagactctgcaggccag
atgatggacagcgaggagagggacacgttgtctcagatctcagacgtggtgaggcagccg
gcctttatcgcaggcattggcgccacctgctggctggtgctgatgatcttcagtgtgtgg
ctctaccggcaccgcaagaagagaagtggcctcagcagcacatacaccggcatccgcaaa
gtgccgtcattcacctttacacctacagtggcatatcaaagaggagaatcagcgtgcggc
gctggcagacctggccttctcagcatgggggaacctctcaaccagctgtggctgcctgac
aattggccaaatgcatgtgccaatcacaaggactgtagcatcaactgctgcaataatggc
aacggcaccagtgacagcaacatgacaacatacagccgcccagctgactgcatagctaac
tatggaggccatcctgaaaacaaacagctgggtcctgagacggccatttacagcgacgtg
aacatctccaacaagctcaacgacatcaagacgttcaacaactccagcctgtgctacgcc
agcccgggaggagacccggcggccacgtacgagcccatcccgtacgccaccacgcagctc
atccaggccagcatcaagagtaaagcagctgccgggggggctttagctgaaactatggac
atgcactgctggaaacagccccccaaccctcctccaataccaaaggagatgatggcacag
atgcagtacaacattatagagcaaaacctgcttaataaagatcatctgcaaggaagtgaa
ggaatgatccatcctaagactatcccctacaaccagagccgtgatcacagcacaggcggc
tcgcaccacagctccgacagaggcagcaacagcaccgcggggagtcagaatcaaaagaaa
ggaacgcggggcccaaaaatcctgaaacataatgcagtgagctggggagaagccccgcct
cctcctcatgctaatgcctgggactgcgacgagtacagcctacccatggagaggagtttt
gatccagacgggagaattgaaggctgccctactccaccagttcgaggggcgacctcgtct
ccccccgtcgtgtcttacagtcacccccccaacacacagggagacctgagcaacggcctg
cacaatggagcccagcaccttagccaacacctcagcagccacgctcggcctctgtccccg
acacacacctacagctccatccccttctgcatggacaccgatgggcaggaggaggaagaa
agtgaagaggaggcagatgaggaggcagatgaggagacagacgcagagcccgctgaaagt
cactacagccaacaccacaaccggcagaagcacaaacaccagctgcaccccccctctcca
cacaagctgctcctccacgggttggagcagacccccgcctccagcaccggggatctggac
agatcggtcacagggtccatggtaaacagctggggctcagcatccgaagacaacatctca
tctggcaggtccagtgttgtcagcacctctgaggggtccttcttcacagacggagatttc
aaccaggcggcgttgtctttgcgggaaaacgccggcctgcgcataggccgatatccagag
gagtcaggtcggcgcccccagcggcccagcagccccatgtccacagacagcaacatgagt
cctgcaataacacataaaagacccagaagacataaacagaaccagtctggtcaccaggac
taccaacccaaagatgtcttcaatgatgactcctgcacgcctctgagtttttccagccag
atgtcccacggcgaatatatagcgagaggcgccacgctgccccgggtgggctctggggag
gcccgggggcggaggggcagcactgggactcacaaggtcagggaggctgcagagggccag
gagaagcacaagactccacccggaggaaaaggaagcagcaagagccgacagcactcagaa
ttaggggatgtccttctgtacagtcgtcctgctttcccctcaggtcatgctcagagggag
cctgatgatactcatccatccagctttatgtcatgtggagactcaaggaccaaaccggga
ggacaggtggaggagttcctcaaaagctaa
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integrated database retrieval system
