Pseudochaenichthys georgianus (South Georgia icefish): 117458881
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Entry
117458881 CDS
T09629
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117458881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117458881
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117458881
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117458881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf_RING_Vps8_fungal
FANCL_C
Motif
Other DBs
NCBI-GeneID:
117458881
NCBI-ProteinID:
XP_033955483
LinkDB
All DBs
Position
14:27319012..27416909
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AA seq
811 aa
AA seq
DB search
MTVPQRRLAGLWPWLLMAALQVVLGQPSLESERQVQRAVIKVALLNQESTGKPITLQGVF
VRGSAGSAEGKLMQYHPLSLCNTSEDERQEGDFITIVKLEHTARRCLPLVDKARMALDKG
AQAVIFDVSDDANAAFELREIDFLRGPVVLVEAENAEELMGLVNKNEEAKVTIELLVELP
SWPHYDVGILLTIVLAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAISRLETKTYSSQGC
SGAQRHRAAWGSASSSNSSPVCAICLDDFLDGQHLRIISCAHEFHKECVDPWLLQHRTCP
LCMHNIMGTERQPQRTSRQSQEQSQSFLHPQPFSSPHSHLFPQHAIPFSMRPHYPRGPSG
PYPSLGHYSGSSPVDAQTLRFLTSRQLASSCGYHLPVEGPGRPHRISGNCRTSTHHYTPR
RPCHNNYRSACPAQRSASSSRLQHAASSTPQPRGAPPHTRQDDGSCSGGSYHTERSGYLA
DGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGPGHGP
RRSSLEEGAQARPRSLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEGEHSRGSDEEQ
GAAAADAAASAAPLLDKDSPMCPPKHSPCQCPKPEPTYRPSPGAECQDPSSPPPVLVSPI
PLQLQPHCCHQGHGHPPAPLGRVGGYVHDGPSVHFHQSLDLQDDRSIHIHYGQGPGFCCS
PPELHPALLPVPLILDSGGIEEWPCYAGAHVVWQKRVQQARSEPQLLGPGAPMDRPPCRF
YHGPAADCNTDICLYCQTLHHNQGSEEESGV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgagcctggagtccgagcggcaggtccagcgagcggtcatc
aaggtggcactgctgaaccaagagtcgacggggaagcccatcactctgcaaggggtgttc
gtgcgaggaagtgccggcagcgcggagggaaaactaatgcagtatcaccctctgtctctg
tgcaacacaagtgaagatgaacgccaggagggtgacttcatcaccattgtcaaactggag
cacactgcacgccgctgtctgccgctggttgataaggctcgtatggcattggacaaagga
gctcaggccgtgatctttgatgtcagtgatgatgccaatgctgcttttgagctgagagaa
atagacttccttcgcggccccgtagtgctggtggaggcagagaatgctgaggagttgatg
ggtttggtcaacaagaacgaagaggccaaagttactattgagctcctggtggagctgccc
agttggccacattacgatgttggtatcctgctcaccattgtcctagctattctgaccatc
gtcctaatcttcgctttccgctacaagtgcaagtccaaccggacctgggactcagtccat
cagcagaccatgcgggccatcagtcgcctggagaccaagacgtacagctctcagggctgc
tcgggggcccagcggcaccgcgcagcctggggctcggccagcagctccaactccagcccc
gtctgtgccatctgcctggacgacttcctggacgggcagcatctgaggatcatctcctgc
gctcacgagttccacaaagagtgtgtcgacccctggctgctgcagcaccgcacctgtccc
ctctgcatgcataacatcatggggacggagcggcagccccagagaaccagcagacagagt
caggagcagagccagagcttcctgcaccctcagcccttcagcagcccacacagccacctc
ttcccccagcacgccatccccttctctatgaggccccactatccccggggaccctcagga
ccgtacccctctctgggccactactctggctcttctcccgtagacgctcagacactacgc
ttcctcaccagcaggcagctcgcctccagctgtgggtaccaccttcctgtggagggtccc
gggaggccccatagaataagtggtaactgcaggacttccactcaccactacaccccccgt
cggccctgccacaacaactaccgctcagcctgccctgcccagcgcagtgcatccagctcc
agactgcagcacgcggcctcctccacaccacagccccgcggagcgcccccccacacccgg
caggacgacggcagctgctcgggggggagctaccacacagagcgcagcgggtacttggct
gatgggccagcaagtgactccagttcggggccatgtcatggctcctccagcgactccgtc
ctgaactgtactgacgtgtctctgcagggagtctatggcagctggtccaccttccggagc
tccctgagcagtgactacgatccgtttgtgtattacgggccaggtcctgggcacgggccc
cgcaggagcagcctagaggaaggggcccaggcccggcccaggtctctggattctgttgtg
aacaaagcaggctgccccgaggagcagccgcagactgtgttcagccacatccactaccac
cgccacagacaccaccactatgaggagggggagcacagcaggggctcggacgaggagcag
ggggccgctgctgctgatgcagctgcttctgctgctcctctcctggacaaagactcgccc
atgtgcccccctaagcacagcccctgccagtgcccgaagccagagcccacataccggccc
agtccgggggccgagtgtcaggaccctagcagccctcctccagtcctggtgtccccaatc
cccttacagcttcagccccactgctgccaccagggacacggacaccctcccgctccactt
gggcgagtggggggctacgtgcacgacggcccctctgttcacttccaccagagcctggat
ctgcaggacgaccgcagcatccacatccactatggtcaggggcccggcttctgctgctcc
ccccctgagctgcaccccgccctgctccccgtgcccctcattctggactctgggggtatt
gaggagtggccctgctatgccggggcccatgttgtgtggcaaaagcgggtgcagcaggcc
cgctcagagcctcagctcttggggcccggggcccctatggacaggcccccctgcaggttc
taccacggtcctgctgctgactgtaacacagacatttgtttgtactgccaaactttacac
cacaatcagggatcagaagaggagtccggtgtgtga
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