Pseudochaenichthys georgianus (South Georgia icefish): 117458923
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Entry
117458923 CDS
T09629
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117458923
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117458923
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
117458923
NCBI-ProteinID:
XP_033955553
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All DBs
Position
14:25286646..25298324
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AA seq
993 aa
AA seq
DB search
MENLTPEQWREIMNRKMRFPPELIAAIQEGKIEQLRGLLKTGDGILRRLEESEDRQWREA
LNLSIRLGNESCMDVLLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDQSIDNSQFAPGVTPLTLACQKDLYDIVTMLTRKGHVIPWPHKISCICLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSVTSEDAMLRAFTLSRELRMLSQKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQGSLEEQAFDEGIPNLSRLRLAVNFN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTAWKLFVSMVIFLTMPFLCLVYWVAPKSKVG
KLLKIPVIKFLLHSASYLWFLITLLGESITMEMYRTTFASRHQDMLHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLGMYLASFALRLLIMLKGLFVCHGHDVTEECAYF
TQAVREDWRQEDPQLLAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FVLMIIGTAFLCGINNVYVPYVLSPHLGRFNETFHFLFWTMFGVANQDYVDMPQFVVAEF
VGRIMYGIFTLVIVIVLLNMLIAMITNTFQKIEDDADVEWKFARSKLYLSYFREGLTIPV
PFNIIPSPKAFYYMLRGLFRQIFCCFTSNAENKYPPIPSMSNDKEPEEDQIPYRQQVIRA
LVQRYIESARREFEENKRKDIGNRITLLTKTVSRMHGDIKVVQQLLTEERHPASDLLTNE
GSSFLGKYIIGAKNNFVGFNSKPDENASSFKVPVHNGEKEGVTGQIETDNNPNVVGDCEA
EGSKQVTDCDVVKMEEGRAKTEVGDQKEEQMEADNRENTEHEVKVVAGTSLNHVEKESKP
KAGKGKEDEKLTGGKVSETHSDTTPDTVNMEPKWKQGKKFEHEATGKMAVKEGNAKPGAT
TTVPSPTGSSLSQDTGFGSEEGDGAIGGTVVRP
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagaacaatggcgcgagataatgaaccggaagatgcgcttccct
ccggagctcatcgctgccatccaggagggaaagatagagcaacttcgtgggctgctgaag
accggcgacggcatcctccgccggctggaggagtcagaggaccgccagtggagggaggcc
ctcaacctgtccatccgcctgggcaacgagagctgcatggatgtcctcctgcagggggtc
aagttcgacttccggcagattcacgaggccctgctcgtggccgtggacaccaaccagccc
cgggtggtgaagcgcctgctggaccgcctcgaccaggagaaaggaaacaagatggacgtg
cgctccttctcccaggccatctttgatcagtcaattgacaactcccagtttgctcctggt
gtgactcctctgaccttagcctgccagaaggacctgtacgacattgtcaccatgctcacc
cggaaagggcacgtcatcccgtggccgcacaagatatcctgcatctgtctggagtgtcgt
aacggccggcagtacgatctgctgaagttctccttgtctcgcatcaacacctaccgcggc
atcgccagccgcgcctacctgtccgtcacctctgaggacgccatgctcagagccttcact
ctcagcagggagctccgcatgctctcgcagaaagagccagagttcaagcctcagtacctg
ggcctggaggagctctgccaggagtttgccgtggagctgctgggcatgtgtcgtaaccag
agcgaggtgaccaccatcctgaacagctgcggagacgagagccagggctccttggaggag
caggccttcgatgaggggatccccaacctgtcccgcctgcggctcgcagtcaacttcaac
cagaagcagtttgtggcccaccccatctgccagcaggtgctctcctctatctggtgcggg
aacctggctggatggcggggcagcaggacggcctggaagctgtttgtctccatggtgatc
ttcctcaccatgcccttcctctgcctcgtctactgggtcgctccaaagtcaaaggtggga
aagttactaaagattcctgtgatcaagttcctcctgcactcagcctcctacctgtggttc
ctcatcacgttactgggagagtcaataaccatggagatgtatcgaaccacatttgcttcc
cggcatcaggacatgctgcacagctccttccacatggtgtgggtggtcgggttcttctgg
tacgagtgtaaggaggtgtggatcgaggggctgcgcagctacttcctggactggtggaac
tgcctggacgtgatggtgctcggcatgtatctggcctccttcgcattacgtctgctcatc
atgctcaaaggcttattcgtgtgccatgggcatgatgtcacagaggagtgcgcttacttc
actcaggctgtgcgtgaggactggcgtcaggaggacccccagctgctggccgaggttctg
tttgcagtgaccagcatgctcagcttcacgcggctggcctacatcctgccagctcacgag
tccctgggaactctgcagatctccatagggaagatgatcgatgacatgatgagatttatg
tttgtattgatgatcatcggaacagccttcctctgtggcatcaacaatgtctatgttcct
tatgtcctctctccacatcttggcaggtttaatgagacgttccacttcctcttctggacc
atgtttggcgtggctaaccaggactacgtggacatgccccagtttgtggtggcggagttt
gtaggaaggattatgtacggcatcttcaccctcgtcatcgtcatcgtcctgctcaacatg
cttatcgccatgatcaccaacaccttccagaaaattgaggatgatgcagacgttgagtgg
aagtttgcccgctccaagctgtacctcagttacttcagagagggcctcaccattcccgtg
cccttcaacatcattccctcacccaaagccttctactacatgttaagaggtctcttcaga
caaatcttctgctgcttcacttcaaatgctgagaacaaatatcctcctattccctctatg
agcaatgataaggagcctgaagaggaccagataccgtaccggcagcaggtgatcagagcg
ctagtgcagcgctacattgagtcggcacgcagggagttcgaggagaacaagaggaaagat
atcggcaatcggatcactttgctgaccaaaacggtcagcaggatgcacggggacatcaag
gtggtccagcagcttctgacggaggagagacacccagcaagtgacctactgaccaatgag
ggctcctcttttctggggaaatacatcattggtgccaaaaacaattttgtaggatttaac
agcaaaccagatgagaatgcttcatcattcaaagtgccagtgcacaatggagagaaagaa
ggggttacaggtcaaattgaaacagataacaatccaaatgttgttggcgattgtgaagca
gaaggatcgaagcaggtgacggactgtgatgtggtgaagatggaagaggggagagctaaa
actgaggtaggggatcagaaggaagagcagatggaagcagacaatagagaaaatactgaa
catgaagttaaagtggtagcagggacaagtttgaatcatgtagaaaaggagtctaaaccc
aaggcaggaaaaggaaaggaagatgagaagctgacaggggggaaggtgagtgaaacacac
tcagatacaactcctgacacagtcaacatggagccaaagtggaagcaaggtaaaaagttt
gaacatgaagcgacagggaaaatggctgtcaaagagggcaatgcaaagcctggagccaca
acaaccgtcccctccccaacaggaagcagcctctctcaggacaccggcttcgggtcagaa
gaaggggacggggcgattggaggaacggtagtgaggccgtag
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