Pseudochaenichthys georgianus (South Georgia icefish): 117458939
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Entry
117458939 CDS
T09629
Symbol
nle1
Name
(RefSeq) notchless protein homolog 1
KO
K14855
ribosome assembly protein 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgeo03009
]
117458939 (nle1)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117458939 (nle1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WDR55
DSE1_N
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
ANAPC4_WD40
ASA1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_RIG_2nd
NLE
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_DCAF4
TRM82_WD
Beta-prop_NOL10_N
Beta-prop_SPT8
PAC11
Tricorn_2nd
Beta-prop_HPS5
eIF2A
WD40_RFWD3
Ge1_WD40
PD40
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
WDR54
Cytochrom_D1
PALB2_WD40
Tenui_PVC2
Motif
Other DBs
NCBI-GeneID:
117458939
NCBI-ProteinID:
XP_033955580
LinkDB
All DBs
Position
14:complement(19787106..19792141)
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AA seq
478 aa
AA seq
DB search
MASEDVERMLIQFQDEEGVVLGSPFDVPLDITPDKLQLVCNALLQKEEPVPLAFFVRGEA
EVVSSLGLCVKALCVETEQVLPIVYQPQAVFRVRAVARCTSTLQGHTEAVISTAFSPTGK
YLASGSGDTTVRFWDLTTETPHHTVRGHTHWVLSISWSPDGKKLASGCKNSQICLWDPVT
GTQLGKTLTGHSKWITWLSWEPLHLNPECRYLASSSKDGSIRVWDTVLGRCEKILTGHTQ
SVTCVKWGGDGLLYTSSQDRTIKVWRAKDGVQCRTLQGHAHWVNTLALSTDYVLRTGAFE
PADATINPQDLTGSLEELKEKALQRYNKVRGSAPERLVSGSDDFTLFMWNPAEEKKPLAR
LTGHSALVNEVLFSPDTRLLASASFDKSIKIWDGRTGKYLISLRGHVGSVYQVAWSADSR
LLVSGSSDSTLKVWDIKTGKLNMDLPGHADEVYAVDWSPDGQRVVSGGKDKCLRIWRR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaggacgtggagcggatgctgatccagtttcaggatgaggaaggagtggtt
ctgggttcaccttttgatgttcctctagacatcacacccgacaaactacagcttgtctgt
aatgcactgctacagaaggaggagcctgtgccactggcattttttgtgcgtggcgaggca
gaggtggtgtccagtctggggttgtgtgtgaaggctctctgtgtggagacagagcaggtc
ctgcccattgtgtaccagcctcaggctgtgttcagggtccgggcggtggcacgctgcacc
agcacgctgcagggacacacagaggctgtcatctcaactgctttcagccccaccgggaaa
taccttgccagcgggtcaggtgataccacagtgcgtttttgggacttgactactgagacg
ccccaccacactgtcagaggacacacacattgggtactgagcatcagctggtctccagac
ggcaagaagctggcttcagggtgcaagaacagtcagatctgtctgtgggatccagtgacg
ggtacacagttggggaagactttgaccggacactccaagtggatcacttggctgagctgg
gaacctcttcaccttaacccagagtgccggtacttggccagtagctctaaggatggctca
atacgtgtttgggacaccgtgttgggtcgttgtgagaaaatcctgaccggacacactcag
tcagtcacctgtgtgaagtggggaggagatggacttctttacacttcctcccaggaccga
acaatcaaggtctggagagccaaagatggcgtccagtgcaggactctgcagggtcacgcc
cactgggtgaacaccctggctctcagcacagactacgtcctgcgcactggagcttttgaa
cctgcagatgccacgatcaacccccaggacctcactggatcattggaagagctgaaagaa
aaggctttgcagagatataataaagttaggggttcagctccagagcgcttggtgtcgggc
tcagatgatttcaccttgttcatgtggaaccctgcagaagagaaaaagcctctggccagg
ctgacgggtcacagcgctctggtcaacgaggtgctcttctccccagacaccaggctcctc
gcctctgcctcattcgacaagtccattaaaatctgggacggacgcactggaaagtacttg
atatccctgcgtggccatgtgggctctgtgtatcaagtggcttggtccgcagacagcagg
ctgctggtcagcggcagcagcgacagcacgctcaaagtgtgggacatcaagactgggaag
ctgaatatggaccttcccggccacgctgatgaggtctatgcagtggactggagtcctgat
ggacaaagagtggtcagcggtgggaaagacaaatgtctcagaatatggagaagatag
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