Pseudochaenichthys georgianus (South Georgia icefish): 117458998
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Entry
117458998 CDS
T09629
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117458998 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117458998 (nfrkb)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
117458998 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
117458998
NCBI-ProteinID:
XP_033955699
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All DBs
Position
14:complement(17904274..17915717)
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AA seq
1272 aa
AA seq
DB search
MDALTHMLTDPLDPKEEDNGQITEECMLGNCILNLPEDLLEDPDIFFSVLSESTWSEVLS
DSQRQHLRQFLPKFPDNNVAEQDETIGDLFNNTNFHFGNPLHLAQKQFRDGYFNPEVVKY
RQLCAKSQKKQQLHSLQQYYHKLLKHILVSRKELLEFAVQNGLDFPPKRKLQTKTHAEMR
EPRVRRRLSRILKEVKTECGDSNASSDDDDISLWTPAPHSPSSPTPTVSLRVLPSLSTQD
MKITEKIELGERDLKAMLQNHRDKRKRQPDHPDLMTSDLHLGDILSRTNIGRKGTLPLFD
LSLPKKKIKDERRKKKMRTIKVESEDPCEILSPSENSSAPPVSIINSLPDTPSTPLANIK
EEIVEECQSSPAPVEEIAISFFSLLESILATESLTSTSLLEEKVQMWQSSPASSLNVWFS
SVPCWSDLVLQALQFLAGETKDGMMALPSGFFPFVEFADESQQWRWIGPTHDTEKDLSAL
CQLWLDSKDLVIKTENEEMLEMTSPTARVSTDYVVRPSTGDERQVFQIQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRSRS
QEEFERIHQAQAAAAKARKALQQKPKPPSKPKSGKEGGGKTPGCLEAGQDMGSIPMSPTP
TTPTLNTPGTPKSPLPCAASIPTKTGGLDTIKTSTGVLLVSPPSLPQLGTILPSSQACPQ
VSHTVTSQHTARIVSHLAAGSLPQVRVVSAHSGLGPSAGGQQATMLHHTPHQIRMPMSMT
AKGISQTVVSLPLRTQSVSSPVHVPTSLSVSAVALAKPQARSPGSPAHNYTSSPALLHGV
SGQNIKQVSITGQLGMKHAGGAGIPITATNLRIQGKDVLRLPPSSITTDSKGQTVLRITP
DMMATLAKSPVATVKLTPDFLGSASGSKSISATLHMTAPHSLASSASGSTSDIQTTKAGS
VTSTLLKATGDIRLMPTLAVTMADQKTRTFSTVSSPDKSGATIRIMPGLGVIPQKQGHTI
TMTTTTGTKTLTASTCANVVTMAASVVAGAKGLTVAPGVSCSTLTLGTATATVRQVPATV
VTTQTGKLPTRITVPISVLSQPLKSKSVVTTPMVKGSLNASLSSLGRNIILTTMPAGTKL
IAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVQAQQLQQRMVTGSPKSVSTVVVTTAPSP
KCAPNPPPAPKQ
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcactcacatgcttacagacccccttgatccaaaagaagaagacaatgga
caaatcacagaggagtgcatgctggggaactgtatattaaacctaccagaggacctactc
gaggaccctgacattttcttctccgtgctgagtgaaagcacctggagtgaagtactgtca
gattcccagagacagcaccttcgtcagtttttgccaaagtttccagacaacaatgttgca
gaacaggatgaaaccatcggtgacctattcaacaacacaaactttcattttggaaatccc
ctccatcttgcacaaaaacagttcagagatggttacttcaatcctgaagtggtcaagtac
agacaattgtgtgccaagtcccagaagaagcaacagttgcactcccttcagcagtattac
cacaaattgttgaagcacatcctcgtctccagaaaggagttgctagagtttgcagttcaa
aatggtctggactttccaccaaaaagaaagttgcagaccaagactcatgctgaaatgcga
gaaccaagggtgagaagaagattgagccgcatattaaaggaggtcaaaactgagtgcgga
gacagcaacgcttcatctgatgatgacgatatatcattatggactccagcaccccattcg
ccttcctctccgacgcccactgtctcactcagagtcctccccagcctctccacccaagac
atgaagattactgaaaaaatagaactaggggagagagatctaaaggccatgctgcaaaac
catcgggataagaggaagcgacagccagatcatccagacttgatgacctctgacctccac
cttggggacatactttcaagaacaaatatcggtcggaaggggacactgccactttttgat
ctgtcactgcctaagaagaagattaaagatgagagaagaaagaagaaaatgaggacaata
aaagtggaatctgaggatccttgtgaaattctctcaccttcagaaaactcatcagctcca
ccagtgagcatcatcaactccctgccggacacgccgtccactcccctggccaacatcaaa
gaggaaattgtggaggagtgtcagagcagtccggctccagttgaggaaatagctatcagt
ttcttcagcttgttggagagcattttagcgacagaaagccttaccagcacttcattgttg
gaggaaaaagttcaaatgtggcagtcctctccagccagctccctcaacgtctggttctcc
tctgtcccgtgctggtctgacttggtgcttcaagccctgcagtttcttgcaggagagact
aaagatggcatgatggcactccccagtggcttttttccatttgtggaatttgctgatgaa
tctcagcagtggaggtggatcggccccacgcacgatacagagaaggatctcagcgcactc
tgtcagctgtggctggactccaaagatttagtcatcaagaccgaaaatgaagaaatgcta
gagatgacttctcctactgcaagagtctcaactgactatgtggtacggcccagcactggg
gatgagagacaagtatttcaaatccaggagcagcagcgatacaaccagccgcacaaggcc
ttcacctttaggatgcacggctttgaatctgtggtggggccggttaaaggcgtgttcgat
aaggagatgtccctcaacaaagccagggagcacacgctgctgcgctcagaccgaccacca
tatgtcaccattctttctctggtgcgagatgcagcggccaggttacccaacggagaagga
acaagggcagagatctgtgaactgttgaaagactcacaatttcttgctccagatgtaacc
agtgcacaggtgaacacggtggtcagtggggctctggatagacttcactatgagaaagac
ccctgtgtgaagtatgacattggtcgtaagctctggatttacctgcaccgcagtcgcagc
caagaggagtttgagaggatccaccaggctcaagctgctgctgcaaaagcaagaaaagcc
ctacagcagaaacctaagcctccgtcaaagcctaagtctggtaaagaaggaggcggtaaa
accccggggtgtctggaggcaggacaggatatgggctccattcctatgtccccaacccct
acaacacccaccctaaacacaccaggaacccctaaatcccccttaccctgcgctgccagc
ataccaacaaagaccgggggcctggacacaatcaagaccagcacaggagttctccttgtg
tcccccccctcgctgccccagctgggaacgatcttacccagcagtcaggcctgtccacag
gtttcacatacggtcacgtctcaacacacggctcggatagtgagccacctggcggcaggc
tccctccctcaggtgcgggtggtgtccgctcattctggtctgggtccctcggcaggaggt
caacaggctaccatgttgcatcataccccccaccagataaggatgccaatgtcaatgaca
gccaagggcatctcccagacagtggtttctcttcctctgaggactcagtctgtcagtagt
ccggtccacgtgcccaccagcctctcagtgtctgctgtagctttggccaaacctcaagcc
cggtcccctggaagcccggcacacaattacacctcttcccccgctctgctgcatggagtc
tccggccagaatataaaacaggtgtctatcacaggccagttgggaatgaaacatgctgga
ggagcaggaatcccaataacagctaccaacctgcgcatccagggtaaagatgtcctccgt
ctccccccctcctccatcactacagactctaagggccagacggtgctgcggatcacccca
gacatgatggccactctcgccaaatccccagttgcgactgtcaaactcacccctgacttc
ctgggctcagcctcaggcagtaaaagcatatcagctactctgcacatgacggccccccac
tccttggcttcctctgcctccggttccacttcggatattcagaccactaaagcaggctct
gttacctccaccttgttgaaggccaccggcgacattcgtctgatgcccactctggctgtc
actatggcggaccaaaaaacaagaaccttctccactgtttcctcccccgacaagagcggg
gccaccattcggataatgccgggccttggtgtgattccacagaaacagggtcacaccatc
actatgacaaccaccactggcactaagaccctcacagcgtctacatgtgctaacgtagtg
accatggctgccagtgttgtggctggggccaaggggctcactgtggctcctggggtctca
tgctccactctgacgctaggaacagccactgccaccgtgaggcaggtccccgctacagtg
gttaccacacaaacagggaagttgccaacacggataactgtacccatctctgtgctgagc
caaccactgaagagcaagagtgttgtgaccacaccgatggtgaaaggaagtctaaacgca
agtctcagcagtctgggcaggaacatcatcctcaccaccatgcctgcaggcaccaagctg
atcgcagggaacaaaccggtcagctttgtcaccgcgcagcagttccagcagcttcagcag
cagggacaggccacacaggttcgcatccagacggtccaagcacagcagctccagcagcgc
atggtaacaggctccccgaaatctgtttccacagttgtagtcacgacagcaccttcaccc
aaatgtgcccccaacccccctcctgcacctaaacagtga
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