Pseudochaenichthys georgianus (South Georgia icefish): 117459004
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Entry
117459004 CDS
T09629
Symbol
ncor1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117459004 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117459004 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117459004 (ncor1)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117459004 (ncor1)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
117459004 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
117459004
NCBI-ProteinID:
XP_033955716
LinkDB
All DBs
Position
14:27833138..27900549
Genome browser
AA seq
2481 aa
AA seq
DB search
MSSSSGYPPPRGASATSRVRYPAHSVQYSFTGSRHQQDFSIPDYRTHMQDAQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSAQSEHEALDSKRPRMETVAEAHISRTPPLPGGILMPI
GHSVQDSLRTSADVKKDSQFSAKVESTSQGGHALHMGDDQDASPSKLSKEELIQSMDRVD
REIAKVEQQIFKLKKKQQQLEEEAAKPMEPERPATPPPVEHKHRSIVQIIYDENRKKAEE
AHKVLEGFGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKICQ
RYDQLMEAWEKKVDRMENNPRRKAKDGRTREYYERQFPEIRKQREQQERFQRVGQRGTGL
SATIARSEHEISEIIDGLSEQENNEKQMRQMSVIPPMMYDTEQRRVRFINMNGLMDDPMK
VYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNYKT
LVRRNYGRRRGRNQQITRPSQEEKSDEKNEEEKSEKSEKKEDEEKKDEEEKDEKEDSRDI
GKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEIPPPAPE
PALPDPPLLPKPDPMQKSLKEPAKPQTPVASMDANKAGAGETGETSRWTEEEMEVAKKGL
VEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEGLA
NVSPDDEDDDDNADDSEGGDNSSDTESAPSPSQSGDSKRADGAAGDAHCSDQDKGQASNG
KGLEPLYGGLCVKEEKSPESESGSQEEKARMGPYGGSVHPKTEPQDTDMNSGEVQVKMEP
EMKERGEKGDHSERHRELHSDNDSSATCSADEDVEAEPERQRMFSMEKPSMLNPQGSVLV
SSPKQAQLNIQQMQNRAAAIPPMMPGSYGPGGVPMSGFAMLQHQIKAVHDSAHQEEKQRQ
DHGDLERRPSFNTRSPTVIDRDGKPLPYMPYEMKLALEQEMHSGRPGSPYRLSPREMSRA
SPQPDPNAPNASRYSVPPVLHPAPNQLVQSTADGVRVTFSRPSRPPNIPSPPPLIPTTKP
TDKPSFIQGGSISQGTPGTYLPSHAVYGPEGTKSAVGSISLGLPRQQDPNKPGAAVPSMQ
DGRGNPAKMGEGMTKRGSITQGTPALSQPIMAADLLKGTITKLATEDMSNPDKARGDQLS
KGHVIYEGKSGHILSYDAIKNPRENTRSPRTALELKRTYDMMEGPLGRGHPFEGLISRAL
PREGQHGDSKERPMMTGSIMQGTPRTAAETYEDAMKYGKQIKRESPPIRSFEGGIGKGKP
YEGVNTIKELGRSIHEIPRQEQSGQDVCKTPEMSDRRGMEGSMSQIHPHNQSTIKHNVKS
LITSPNKLPHNMPQLNAMERAKYEEGKAVRQSVLNSTSVLRSTHQEANKSQLSPSMYEDA
NARRTPVNYSTNPGSRGSPMMGRTPEGVMSSAKSAAHERKNAMTPTQRENIPSKSPGTGG
DPVGSHSPFDPQHRHIVPGEMYRAHLPPHLDPTMAFHRVLDPAFMFPRQPSPTGYHSTYQ
LYTMENTRQTILNDYITSQQMQVIRPDMARGLSPREQLPYAAGPGGIIDLAQMPPTILLP
HPGGTGNPTLERIAYLPGAQPPFPSRAFNPTSISPGHQAHLAAAVAASAERERERERDRE
QQEKEREKEREREQRERDREIRERERERERTNEYMRGGGAEQPGRPGSRGYLHSPSPSLR
TQEVVVQQRPSIFQGKSVITALMPQTAAATAASQSGSRYSTAADALAALVDAAASAPQMD
VAKVKENKQEREDEMSRRAASMSEQQQQQHLQQQQHHLQQQLQQQQHQQQQQHQQQQQHQ
QQQQQQHQQHQQQQQQQHQQQQQQQQQQQHQHQQHQQQQQHEAERRSMQSPYGAMSLPGG
KPHSAYSEGPGAKDKGPPTSKSRIEEELRTRGKTTITAANFIDVIITRQIASDKDSRERG
SQSSDSSSSLSSNRYDNTAGGTIEVISPASSPVQPQQEKPEEVQPQAAAAGMRAYDMSRY
RQSAEPPQQPPSSQGEGYSQVPKTHRFMTLADHISHIITQDFARNQDPPPVSSSASATFQ
SSMPSVSSSGRTKGHSRYSPENQGQASHHQRSTSRVSPENPPDKPRARPGKSPERSGRQM
ENYEPISPPQSYQGMEKPEAAGHPPQRREAENSEIRNDSRSPGSVSYLPSFFTKLENTSP
MVKSKKQEIFRKLNSNSGVGDSDVGNAQPGTEIFNLPAVTSSSSINPRNNSFSDPANNLG
LEDIIRKALMGNLEERPEEHQGGQSANNNNTPSAGSEVRQEANPSPSMGKQKQSKANSRK
TKSPNLGQAYAGGERPSSVSSVHSEGDYHRQAQAQPQWSWDDRPSSTGSMQFPYNPLTMR
ILSSTPPTSIASPAIQSQQQQQQQQQQQHQHQQQQQQQQQQQQQQQQQQLQPPPAGAPVA
QQRVWQSLLSEQYETLSDSDD
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagctcgggctaccccccacccaggggagcttcggcaacgagcagggtccga
tacccagcacattctgtccagtactccttcaccggctcgcgccaccagcaggatttctcc
atcccagactatcggactcacatgcaagatgctcagggtcgaaggagaccatcgttattg
tctgaattccaccctggaactgaaaggcctccagagagacgccatggttacgaacagcag
tttcactcggcgcagtctgagcatgaggccttggattctaaacgccctcgcatggagact
gttgccgaggctcacatctcacgaacacctccactgccgggggggattctaatgcccata
ggccattcagtacaggacagtctgagaacctctgcagacgtcaaaaaggactctcagttc
tctgccaaagtagagtccacttcccaaggaggacatgcactacacatgggggatgaccag
gacgcttctccctctaaactatccaaggaggagctgatccagagtatggaccgtgtggac
cgagagatcgctaaagtggagcagcagattttcaagctgaagaaaaagcagcaacaactg
gaagaggaagcagcaaagccgatggagccagaaaggccagcgacccctcccccagtggag
cacaagcatcgcagcatagtccagatcatctacgatgaaaacaggaaaaaagctgaagag
gcccataaagtcctggaaggttttggtcctaaggttgagctgcccctctacaatcagcca
tcagacacaaaggtgtaccatgacaacatcaagaccaaccaagtgatgaggaagaagctg
attctgttctttaagaggaggaaccacgctcgtaaacagagggaacagaagatctgccag
cgctacgaccagctgatggaggcgtgggagaagaaggttgatcgaatggagaataacccc
agacgcaaagccaaggacggcagaacacgggagtattacgaaaggcaattccccgagatc
cgcaagcagagagagcagcaggagcgattccagagggttggacaaagaggaacaggcctt
tctgcgacaatcgcaagaagcgagcatgagatttctgaaatcatagatggcctttctgag
caggagaacaacgagaaacagatgagacagatgtcagtcatccctcccatgatgtacgac
actgagcagaggagagtgaggttcatcaacatgaacggcctgatggatgaccctatgaag
gtgtacaaagcccggcagtttatgaatgtttggaccgaacatgagaaggagatctttaag
gagaagtttgtccaacacccaaagaactttggcctaattgcctcttatctggagagaaag
tgtgttgccgactgtgtcctttactactacttgaccaagaagaaccacaactacaagacg
ctggtgaggcggaactatggcagacggagaggacgcaaccagcaaataacgcgtccctca
caagaagaaaagtcagacgagaaaaacgaagaggaaaaatctgagaaatccgagaaaaaa
gaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagggacatt
ggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaaaacacg
ccgcgtggcaggaagactgccaacagccagggccgccgtaagggaagaatcaccacacgc
tccatggccaatgaggctgcatctgtggcggctgaggagatacctccccccgcccccgag
cctgccctgccagatcctccgctgctccccaagccggatccaatgcagaagtcactgaag
gagcctgcaaaaccccagactccagtagcttccatggatgctaacaaagctggtgcaggt
gaaaccggagaaacttctcgctggaccgaggaggagatggaggtcgccaaaaaagggcta
gttgagcatgggcgaaactggaccgccattgccaaaatggtgggcaccaaaagcgaggca
cagtgcaagaacttctatttcaactacaagagacgtcacaacctggacaacctgctccag
cagcataagcaggatacacggcgggcacgtgccgataggtctcaaggtgaaggtctcgct
aatgtgtcacccgatgatgaggatgacgacgataacgccgatgacagtgaaggcggtgac
aacagctccgatacagagagtgctccctccccctctcagtctggagactcgaagagggca
gacggcgctgcaggagatgctcactgctctgatcaggacaaaggtcaagccagtaatgga
aagggcctggagcctttatacggaggactctgtgtaaaggaggagaaaagccccgagagc
gagagcggatctcaggaggagaaggccaggatgggtccctacggaggctctgttcacccc
aaaaccgaacctcaggacacggacatgaactccggagaggttcaggtgaagatggagcct
gagatgaaggagagaggagagaaaggagatcacagcgagaggcacagggagctccactca
gataatgactccagcgccacctgcagtgctgacgaggatgtggaagcagagcctgagaga
cagagaatgttctccatggaaaagccttcgatgctcaaccctcagggctcggtcctggtg
tcttcacccaagcaagcccaactcaacatccagcagatgcagaatagggcagctgccatc
ccacctatgatgcctggttcttatggccccggtggtgtgccaatgagtggctttgccatg
ttgcagcaccagatcaaagcagtgcacgattcagcgcaccaggaagagaagcagcggcag
gatcacggagacctggagcgaagaccgtccttcaatacccgcagccccactgttatagac
agagatggtaagcccttaccctacatgccttatgaaatgaagctggctctggaacaggag
atgcactctggtcggccaggctctccctacagactctcccccagggagatgagcagagcc
tcaccccagcctgaccccaacgcccccaatgcctcccgctacagtgtgccaccagtcctc
cacccggcccccaaccagctggtccagagcacggcagacggagtccgagtgacgttcagc
agacccagtcgacctcccaacattccctctcctcctccactcattccaaccaccaagccc
accgacaagccctccttcatccaaggaggctccatatcccagggaactcccggcacatac
ctgccgtcccatgctgtctacggtccggaggggactaagagcgcagtgggctccatctct
ttaggtctgcctcggcagcaggatcctaacaaacctggagctgcagttccatccatgcag
gacggcaggggcaacccagcaaagatgggcgagggtatgactaagagagggtccataact
cagggcacgccagccctttcccagcccatcatggctgctgacctcctgaagggcaccatc
acaaagttggccacagaggacatgagcaacccagacaaggccaggggagaccagctgtcg
aaaggtcatgtcatctatgaagggaagagtggtcacatcctctcctatgatgctatcaag
aacccaagggaaaacacccgcagtcccaggacagcccttgagcttaaacgcacttacgac
atgatggagggacccttgggcaggggacacccattcgaggggttgattagcagagccttg
cccagagaaggtcaacatggagattctaaggaaagaccaatgatgactggatccatcatg
caaggaacacctagaacggctgcagagacttatgaagatgccatgaaatatggaaagcag
ataaagcgtgagagccctcccatccgctccttcgaagggggaattggcaagggcaagccc
tatgagggagtcaacaccatcaaagagttgggacgctccattcacgaaatccccagacaa
gagcagtccggccaggatgtctgcaagacccccgaaatgtcagacaggaggggtatggag
ggctccatgtcccagattcaccctcacaaccagtcgaccatcaagcacaacgtcaagtcc
ctgatcaccagtcccaataagcttccccacaacatgccccagctcaatgccatggaaaga
gccaaatacgaggagggcaaggcggtccgccaatctgtgctcaactccacctctgtcctg
cgctccacccaccaggaggctaacaagtctcagcttagccctagcatgtacgaggatgcc
aacgctcgcaggacccctgtcaactacagcaccaaccctgggtccagaggatcacccatg
atgggacgtacacccgagggtgttatgagctctgcgaaatctgctgcacatgaaagaaag
aatgccatgaccccgacacagagagaaaatatcccttccaagtctccagggacgggcggt
gaccctgtgggctctcacagccccttcgacccccagcaccggcacattgttcctggagaa
atgtaccgagcacacctgcctccacacctggaccccaccatggccttccacagagtgctc
gatcctgcgttcatgttccccaggcagccgtctccaaccggctaccatagcacgtaccag
ctgtacaccatggagaacacacggcagacgatcctcaatgattatatcacttcccagcag
atgcaagtcatccgacctgacatggcccgagggttgtcaccgcgggaacagctcccttac
gcagccggacccggagggataattgatctagcccagatgcctccaactatcctgttacct
caccctgggggaacaggtaatcccactttggaacgcatcgcctacctccccggagctcag
ccccctttcccttctagggctttcaacccaacctccatatcgccaggccaccaagcccac
cttgctgccgcggttgctgccagtgcggagagggaacgggagagggagcgtgaccgggag
cagcaggagaaagagcgagagaaggaaagggagagggagcagcgagaaagggaccgggaa
atacgggaacgagagcgggaacgggagagaaccaacgaatacatgcgcggaggtggagca
gagcagcccggccgaccagggagtcgaggttatctgcactccccctccccctcgctcagg
acgcaggaggtggtggttcagcagcggcccagcatcttccagggcaagagtgtcatcacc
gctctgatgcctcaaacagcagcagcaacagcagcatcacagagcggctctcgctacagc
actgcagctgacgctctggctgctctggtggacgctgcagcctccgcccctcagatggac
gtcgccaaggtgaaggagaacaaacaagaacgggaagacgaaatgtcgaggcgagcagcc
agcatgtccgaacagcagcagcagcagcatctgcagcagcaacagcatcatctgcagcag
cagcttcagcagcagcagcatcaacaacaacagcagcatcaacaacaacagcagcatcaa
caacaacagcagcagcagcatcaacagcatcaacaacagcagcagcagcagcatcaacaa
cagcagcagcagcagcagcagcagcagcatcaacatcaacaacatcagcagcagcagcag
cacgaggcagagaggcgctccatgcagtcaccatacggtgctatgtctctgccagggggt
aagcctcattctgcttactctgaggggcccggagctaaggataagggccctccaacgtca
aagtctcgcatcgaagaggagcttcggactcgtggaaagacgactatcacagcagctaac
ttcattgacgtcatcatcacgcggcagatagcctcggacaaggactcaagagagcgaggc
tctcagagctcggactcctccagcagcttgtcatctaatcgatacgacaacaccgccgga
ggaaccatcgaggtgatcagtcctgctagttccccagtccaaccccaacaggagaaacca
gaggaagtgcaaccacaggcagcagcagctggcatgcgggcctacgacatgagtcgttac
cggcaatctgcagagcccccccagcagcccccctcttcccagggtgaaggctactcccag
gttcccaagactcaccggttcatgaccttggcagaccacatttcgcatatcatcacccag
gacttcgccaggaatcaggaccctcctcccgtctcctcctcagcttcggcaacattccag
agctcaatgccatccgtgtcctcgtcaggccggaccaaggggcacagccgctacagtcct
gagaatcagggccaggcctctcaccaccagagatccaccagcagagtttccccagagaac
ccccctgacaagcccagagcgaggcccggtaaatctccagagcgaagcggcaggcagatg
gagaactatgaacccatttctccaccacagagctaccagggcatggagaaaccggaagcg
gccgggcatccaccccagagacgagaggctgaaaactctgagatcaggaatgactcgcgc
tctccgggaagtgtaagctatctgccttccttcttcaccaagctggaaaacacctcgcct
atggtgaaatccaagaagcaggagatctttcgtaagttgaactccaactctggtgtcggt
gattctgatgttggaaatgctcaaccaggcacagagattttcaacttgcctgctgttacc
agctccagcagcatcaacccaaggaataactcatttagtgacccggccaataacctgggc
ctagaggacatcatccgcaaagccttgatgggcaacctggaggagaggccagaggagcat
caggggggtcagtctgccaacaacaacaacacacccagcgcgggcagcgaagtccgccag
gaggccaacccgtctcccagtatggggaagcagaagcagagcaaagccaacagccggaaa
accaagtcccctaacctgggtcaggcctacgccggaggggagcgtccctcctcagtgtcc
tccgtccactccgagggagattatcaccggcaagcccaagctcaaccccagtggagctgg
gacgaccgaccctcatccacaggatcaatgcagttcccatacaacccgctgaccatgcgc
atactgagcagcacgccacccacctccatagcttcccccgccattcagagccagcagcaa
cagcagcagcagcagcagcaacaacatcaacatcaacaacaacaacaacaacaacaacaa
cagcaacagcagcagcagcagcagcagctgcagccgcctcctgctggagctccggtggcc
cagcagcgggtgtggcagtctctgctgtcagagcaatacgagaccctatctgacagcgac
gactga
DBGET
integrated database retrieval system
