Pseudochaenichthys georgianus (South Georgia icefish): 117459285
Help
Entry
117459285 CDS
T09629
Symbol
opn3
Name
(RefSeq) opsin-3
KO
K04256
c-opsin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117459285 (opn3)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pgeo04030
]
117459285 (opn3)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117459285 (opn3)
G protein-coupled receptors [BR:
pgeo04030
]
Rhodopsin family
Vision
Opsin
117459285 (opn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
117459285
NCBI-ProteinID:
XP_033955916
LinkDB
All DBs
Position
15:complement(8958900..8978877)
Genome browser
AA seq
385 aa
AA seq
DB search
MNPVNETERSTEHYIFAPGTYKLLAFTIGTIGVFGFCNNVVVIVLYCKFKRLRTPTNLLL
VNISLSDLLVSVIGINFTFVSCLKGGWIWSQATCIWDGFSNSLFGIVSIMTLAALAYERY
IRVVHAQVVDFPWVWRAIGHIWLYSVVWTGAPLLGWNRYTLEIHRLGCSLDWASKDPNDA
SFILLYLLACFFVPVGIMIYCYGNILYTVNMLRSIQDLQTVQIIRILRYEKKVAAMFLLM
ITCFLVCWTPYAVVSMLEAFGRKSMVSPMVAIIPSFFAKSSAAYNPLIYVFMSRKFRRCL
LQLLCSRLSWLQHSLKERPTTPVQRPIRPIVMSGNYGSRNRPKKRVTFSSSSIVFIITSN
DFHQLDVTSKARSPAEVNVIQIRPL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgtcaacgaaacggagagaagtacagaacattatattttcgcacctggcacc
tacaaacttctcgcgttcaccattgggactatcggggtgttcggcttctgtaacaacgtc
gttgtcatcgtgctgtactgtaaattcaagagactgaggacccccaccaatctgttacta
gtcaacattagtttgagtgacctgctggtttctgtcattggaattaactttacctttgtt
tcgtgcctcaaaggcggatggatctggagccaggcgacatgcatctgggacggcttcagc
aacagcctattcggcatcgtctccatcatgaccctggctgctctggcctatgagcgctac
atccgggtggtccacgcccaggtggtggacttcccctgggtgtggcgggccatcggccac
atctggctgtactccgtggtgtggacgggcgctcctctgctgggatggaaccgctacacg
ctggagatccatcggctgggctgctccctggactgggcctctaaggacccgaatgatgcc
tccttcatcctcctctacctcctggcctgtttctttgtgcctgtgggcatcatgatctac
tgctatggaaacatcctttacacagtgaatatgctgcgctccatccaggaccttcagacg
gttcagatcatcaggatcttgcggtacgagaagaaggtggccgctatgtttttgctgatg
atcacctgcttcctggtgtgttggacgccctacgctgtagtgtccatgttggaggccttc
ggcagaaagagcatggtctctcccatggtggccatcatcccctcgttctttgccaagtcc
agcgcggcctacaaccccctcatctacgtgttcatgagcagaaagttccgacgctgtttg
ctgcagctgctgtgctcgcggctgtcttggttgcagcacagcctcaaggagcgccccacg
actccggtccaacggcccatacgaccgatcgtcatgtccggaaactacggcagcaggaac
cgacctaagaagagggtgactttcagctcctcctccattgtctttatcatcaccagcaat
gacttccaccaactggatgtgacctccaaggctagaagccctgcggaggttaatgtcatt
caaatcaggccactctga
DBGET
integrated database retrieval system
