Pseudochaenichthys georgianus (South Georgia icefish): 117459336
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Entry
117459336 CDS
T09629
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgeo03009
]
117459336 (rrp12)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
90S particles
Other 90S particles
117459336 (rrp12)
Pre-60S particles
Other pre-60S particles
117459336 (rrp12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
117459336
NCBI-ProteinID:
XP_033955999
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All DBs
Position
15:complement(23431620..23444600)
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AA seq
1288 aa
AA seq
DB search
MVKSGKLRSGTGTKLKRWKKGHSSDSNPETSRFRQAAKSRFFSRPSGRNDLTVDALKLHN
DLQAGPLEIGSRKDARMEEEPDEAFSDRTSGTFLSGLSDCSNLTFRKVQRYWESNSAAHK
EICAVLAAVTEVIRSQGGKETETEYFAALMTTLEVVDTTESQAAVAYLLNLVMKRVPAPV
LMSKFSDTTKALMDVMSKQATSESASALRWILSCLATLLRKQDISVWTYPSTLQAYHGLL
SFTVHSKPKVRKAAQQGVCSILRGSDFLFRDNAPTHHPAAGTTAKFCMKEMEQAGGSKED
TTTLHVLGLLKELMGTFPLGAVKSCCETLLRVMTLSHVLVTASAMQSFHRLFSGKPNAAT
LSPELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLAGLQSSLSLGHLPRLFSAAM
SCLLSPHTQVASAATNTLKTLLTECVAPHMEEMGMITATASAGNPSYVCKMFRIVEEGLS
YRYHASWPFVLQILGCFYRSTGKRAHPIMTKSLQSLADLRSTPHFPFIGELDLAVGGAVV
SMGPEVVLGAVPLNITGFEDDLEFPRSWLIPVIRDHVKNTHLAFFSSYFLPLASTLKQRA
DELEQPGHKLEAKVYGTLQTQIWTMLPGFCTCPVDLLVSFKGLARTLGTIINERPDLRLT
VCQALRTVVNKSCSTEEEKAEVGRFSKNFLPILFNVYGQQPAAGESSTYRMAVLDTIKIY
LTVTETQLVGTFLQKATDKLSSSDTTEFTRLSMMDLVVAMAPAVDVATMTKTFELIRPYL
ESKEAGMQKKAYRVLEEMCGGEREECRSFVVANLDTLKVVLLDTLKKASSPAKRPRLKCL
IHIVKGLTEEHKDFIPALLPEVIICTKEVSAGARKNAYTLLVEIGKAFVRFCGNTKDALE
EYLMLVYAGLTGSVTMITCTVLALTRLMFEYKDAIDTNTREQLLHNICLLLTSRTREIVK
AALGFIKVILFIMDPKTLASHASVMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFELV
KSMLPVEHHKVLANIRKAEARTKRQKQVAEQNDDSESEHENPKTKSQSIEDILAESDSDM
SEDEGKARKAQKKGGKPQKARAWLKEGEEDDPLNFLDPTVSQRVLATNPKLKKSAKVEHG
FKVTSDGRLIIREDEEDDGKDDDEGEMKDILEEAGVKSKKIQKRKFRDDNMDEDMDIAPQ
LKYKAGGSGIHRPLRGSEDTGAEYKSKKGKGDVKKTGKHDPYAYIPLKKSQLNRRKRAKL
QGQFKGMVRGAQKGATSGKKMQKNKRKA
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatcagggaaacttcgatctgggacggggactaaactaaaacgatggaagaag
ggacacagcagcgactcaaacccggagacgagtcgcttccgacaggctgcaaaaagccgc
ttcttcagccgaccctccggaaggaatgacctaacagttgatgctctgaagctgcacaat
gatctgcaggctggtccgctggagattggtagccgtaaggatgcccgcatggaagaggag
ccagacgaggcgttttcagataggacgtcaggaaccttcctcagcggcctgtccgactgc
tccaacctgaccttcaggaaggtgcagcgctactgggagtccaattcagctgctcacaaa
gagatctgtgcggtactggcagctgttacagaggtgatccgtagtcaaggaggaaaggag
actgaaacagagtactttgctgctttgatgaccactcttgaggtcgtggatacgacagag
tctcaggccgctgtggcgtatctcctcaacctcgtcatgaaacgggttccggctccagtg
ctcatgtctaagttctctgacaccaccaaggctctgatggacgtcatgtccaaacaggca
acgtctgagtctgcctctgcgctcagatggatcctgtcatgcctggccactttgctgagg
aagcaggatatatctgtttggacttacccgtctactcttcaggcttaccacggactgctc
agcttcacagtgcacagcaagcctaaggtccgtaaagctgcacagcaaggagtctgctcc
attctcagaggtagcgacttcctctttagagataatgccccgacccatcaccctgcagca
ggaaccacagccaagttctgcatgaaagaaatggaacaggcaggaggcagcaaagaggac
accaccactcttcatgtgctgggtcttctgaaggagttgatggggacgtttcctctggga
gcggtcaagtcctgttgtgagactctgctgcgagtgatgacactcagccatgtgctggtg
acagcgagtgccatgcagtcctttcataggctattcagcgggaagccgaatgctgcaacc
ctctcaccagaactcaacgcacagatcatcacggctctgtacgactacctgcccagtgag
aacgacctacagccgctgctggcctggctcgctgtcatggagaaagcacatgttcacttg
gcaggtttgcagagctctttgagtttgggtcacctccctcgcctcttctctgctgccatg
tcctgcctgctgtcgcctcatacacaggtggcttctgcagcaaccaatacactgaagact
ttgctgactgaatgtgtagcccctcacatggaggaaatgggcatgatcactgccacagcc
tctgcagggaacccctcctatgtctgcaaaatgtttcgcatcgtagaggaaggcttgtcc
tatcgctaccatgcctcctggccatttgtgctgcagatcctgggttgcttctatcggtct
acagggaaacgtgctcaccccatcatgaccaagtccctgcagtctctagcagacctgcgc
tccactcctcatttccccttcatcggagagttggacctggctgtaggaggcgctgtagtg
agcatggggcctgaagtggtgctgggcgctgttcctctcaacatcaccggctttgaggat
gacttggagttcccacgcagttggctgatcccggtcatacgggatcacgtgaagaacact
cacctcgctttcttctcttcttatttcctccctctggcttccacactcaagcagagagct
gatgaattggagcaaccaggacataaacttgaggccaaagtctacgggacattacagacg
cagatttggaccatgcttcctggtttctgtacatgtcctgtagacctgctggtttcgttc
aaaggcttagcccgcacactcggtacgattattaacgagcgaccggacctgaggctcaca
gtgtgccaggctctacgcactgtcgtcaacaagagctgctccaccgaggaagaaaaggct
gaagtgggccgcttctccaagaacttcctgccaatccttttcaacgtgtatggccagcag
ccggcagctggagagtcctccacctacaggatggccgtactagacaccatcaagatctat
ctaactgtcactgaaacacagctggtcggcacgttcctgcaaaaagccacagacaaactg
agcagctcggacaccacagagttcacacggctgtcaatgatggaccttgtggtggccatg
gctcccgctgtagatgtggccaccatgactaaaacctttgagctgattaggccatatttg
gagtccaaagaggcaggcatgcagaagaaggcataccgtgtgctggaggagatgtgtgga
ggagagagagaggagtgcagatcctttgtcgttgccaatctggacacactcaaagtggtc
ctgctcgacactctgaagaaggcctcatcgccggccaaaaggccacgactcaagtgtctg
atccacattgtgaaggggctcactgaagaacacaaagactttatcccagcccttctgcca
gaggtgattatatgcaccaaggaggtgtctgctggagcgcgtaagaatgcctacactctg
ctggtggaaataggaaaagcatttgtccgcttctgtgggaacacaaaagatgccttggag
gagtatttgatgctggtgtacgcaggactcacaggctccgtcaccatgatcacctgcaca
gtgttggctctaactcgactgatgtttgaatacaaagacgctatagacacgaacaccagg
gagcagctgctgcacaacatctgtctgctgctcacctctcgtaccagggagatagtcaaa
gccgccttaggcttcatcaaggtcatcctcttcatcatggaccccaagacgctcgcatcc
catgcctctgtcatgatggagggagttgggaacatcaaagacgatgtgaggaggcacttc
agaaccaaactgaagaacatcttcaccaagttcatcaggaagtttggtttcgagctagtg
aagagcatgctgcctgtagaacaccacaaggtgcttgcaaacatccgcaaggctgaagct
cgcaccaagaggcagaagcaggtggcggagcagaacgatgattctgagagcgaacatgag
aaccctaaaacaaagagccaaagtattgaggacatccttgcagagtcggacagtgatatg
tcagaagatgaaggaaaggctcgtaaagctcagaagaaaggaggcaaaccgcagaaagca
cgggcctggctcaaagaaggagaggaagatgacccgcttaacttcctggatcctacggtt
tcccagagagtgctagccaccaacccaaaactgaaaaagagtgccaaggttgagcatggt
ttcaaggtgacatcagacggacggctgatcatcagagaggatgaagaggacgatggaaag
gatgacgatgagggagagatgaaggatatcttagaagaggctggagtcaaaagtaaaaag
atacagaaaaggaagttcagagatgacaacatggacgaggacatggacattgcgccacag
cttaaatacaaagctgggggttcaggtatccacagacccctgagaggaagtgaagacact
ggggcagagtacaagtcaaagaaaggaaaaggagacgtaaagaaaacagggaagcatgac
ccttacgcttacatccctctgaagaagtcccagctcaatcgcaggaagcgtgccaaacta
cagggccagttcaagggcatggtgagaggagcccagaagggggcgacgtctggaaagaaa
atgcagaagaacaagaggaaagcctga
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