Pseudochaenichthys georgianus (South Georgia icefish): 117459384
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Entry
117459384 CDS
T09629
Symbol
rims1a
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117459384 (rims1a)
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117459384 (rims1a)
Small GTPases and associated proteins
Rab associated proteins
117459384 (rims1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
Zn_ribbon_Nudix
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
117459384
NCBI-ProteinID:
XP_071061807
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All DBs
Position
15:complement(11746149..11891915)
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AA seq
1414 aa
AA seq
DB search
MFASVGPRGAPRPPVAPAIPEPDLSHLTEDERKIIMAVLARQREEEAKEDAMLKEEKPIQ
ARTVNLVGQKKPPQQNDVRGIQQQLSSYRETVIRQATVVAGSTVHRDDAPTCGICHKTKF
ADGCGNLCSYCQTKFCARCGGRVSLRSNTEDKVVIWVCNNCRKQQEILTKPGEWFTGPDG
NPAGLGAAVSEPSVCQKLRSRSQAPSTIQDLNRPHAPGTEPGIDPRSRSEPPRDTRNGRG
GGAGRGERRAVQPRLQTQVSMDRDLRGESRERRESRRLTKGRSLEHDPVGEGLRRTEEGG
YHHMDHSGAPPRKAGPVPPGGRGHPVPMQGRGMGVAGGEVGDGVRPGKRTAGGVGGPHEH
TLAQQPPPPELREPPGLGPGSTPGQGPVGRRTKREKAESMLRNDSLSSDQSESLRPPPPR
PYKSKRGLGAGGKRQTSVSSSEEEGGTTPEYSSCEDAEIESVSERGDWECYPHDPTVWHH
PVTWQPSKEGDHLIGRITLSKRSATMPKEAGALLGLKVVGGRITESGRLGAFITKVKKGS
LADVVGHLRAGDEVLQWNGKLLPGATMKEVYNIILESQAEPQVELVVSRPIGDIPRIPDT
SHPPLESSSSSFESQKMDRPSLHVLSPSSPGMLQDAPQLLPGQLSVKLWYDKAGHQLIVN
VMQAAELPLRSDGRPRSAYVKMYFLPDRSDKSKRRTKTMKRTCEPKWNQTFVYSHVHRRD
FRNHMLELTIWDQPRSPDEDSTFMGEVLIELETALLDDKPHWYPLQTHDVSSIPLPQPSP
YLPRRHTDVPGKKLQRSQRVTEPEFDEGTAVMSKGKQLRAWQGEAAGSQRLPWRCRTSRG
CPPITYAPARCPRTVRSRGASDHGPPTFPPRGVWMMSFLTTRRSQFLRPVTTTPARGRHQ
QEEYLDDRKSFSHSLPRRRPASPRILIQHASPEDDRQLRTLETPECNTLGRDLPISGRGH
LQGGASLSSSVTSSSARRVRQLPQLPPKSSSVEQALVAEECVRQLQMRVHSNRVSAATTS
SQQDLDRSLKNKRELYKDQRRSSENVSHKSSDSDVSDVSAISRTSSASRISSTSYMSIQS
ERPRGRFRAMRATGRHMMKSTSVSGEIYGMDHADGSQSDTALGSLGSGLKKRRSSLSQRV
VDILPSRRSRSTSQLSQTEAAGKTVERQKAPAGKKVGKGASSSIQRSVETGMAVEYPRGG
STMNRQASRESTDGSMNSYSSEGNLIFSGMRLGADSQFSDFLDGLGPGQLVGRQTLATPA
MGDVQIGLMDKKGQLEVEVIRARGLTSKAGSKSLPAPYVKVYLLDNGTCKAKKKTKIARK
TLEPLYQQHLLFEESPQGRVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSTVISWYKL
FPPSSLVDPTLAPLNRLASQTSLDISGPPPGVRS
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcctcggtggggcctcggggcgcccctcgcccacccgtcgccccggccatcccg
gaaccggacctgagccatctgacggaggacgagaggaagatcatcatggctgtgctggct
cggcaacgggaggaggaggcgaaggaggatgccatgttaaaagaagagaagcctatccaa
gcgagaacggtgaacctggttgggcagaagaaacctccgcaacaaaatgatgtccgaggt
atccagcagcagttgtccagctacagggagacggtgatccggcaggccacagtggtggcg
ggctcgaccgttcaccgggacgacgccccaacctgcggcatctgccacaagaccaagttt
gcagacggctgcgggaacctgtgctcctactgccagaccaagttctgtgcccgctgcggg
gggcgagtgtcgctgcggtccaacacggaggacaaagtggtgatctgggtgtgtaataac
tgccggaagcagcaggagatcctgaccaagccaggcgagtggttcacaggtccggatggg
aaccctgctggcctcggggcagccgtcagcgagccgtctgtgtgccaaaagcttcggtct
cgctcccaagcgccctccacaatccaagacctcaaccgaccccacgcccctgggaccgaa
cctggcatcgacccccgatcccgcagcgaaccaccgcgagacacgagaaatggccgggga
ggcggagctggtcggggggagcggcgggcggtccagcccaggctgcagacccaggtttcc
atggaccgggacctccggggggagtccagagagcgcagggagagccggcggctgaccaag
ggacgctctctagagcacgatcctgtgggagaaggtttaagacggacagaagaggggggc
taccaccacatggaccacagcggtgccccccctcgcaaagcagggccggtccctcctgga
ggccggggccaccctgtgcccatgcagggccgtggcatgggcgtagcagggggggaggtt
ggggacggtgtacggcccggtaagaggacggcgggtggggttggagggccacatgaacac
acccttgctcagcagccccctccccctgaactcagagagcctcctggtttgggccctggc
tcgacccccggccaggggcccgtagggagacggaccaaacgggagaaggctgagagcatg
ctgcgcaatgattcgctgagctctgaccaatcggaatcactgcgtccgccccctccaaga
ccctacaagtcgaaacgagggcttggggcgggggggaagaggcagaccagcgtcagcagc
tcagaggaggagggggggaccacgccggagtacagcagctgtgaggatgcagagattgaa
agtgtcagcgagagaggtgactgggagtgctacccacatgaccccactgtatggcatcat
cctgtaacctggcagccatccaaggagggggaccatctgattggacgaatcaccctcagc
aagaggagcgccaccatgcctaaagaagccggagctctgctggggttaaaggtggtggga
ggcagaataacagagtcagggagattaggtgccttcatcactaaagtcaagaagggaagc
ctggctgatgtggtgggacatctcagagcaggggatgaagttctgcagtggaatgggaag
ctgttaccgggggcgaccatgaaggaagtttacaacatcatcctggagtctcaagcggag
cctcaagttgagctagtggtatccaggcctattggtgatatcccaagaatccccgacacc
tcccaccctccattagaatctagttccagttcttttgagtcccagaagatggacagacca
tctttacatgtcctgtctccctccagccctgggatgctccaagacgctccacagttattg
ccagggcagctctcagtgaaactttggtacgacaaagcgggtcatcagctaatagtcaac
gtgatgcaggctgcggagcttcctcttcggtctgacgggcggcccaggagcgcctacgtc
aaaatgtactttcttcctgatcgcagtgacaagagcaaacgaaggacaaaaactatgaag
aggacctgtgagcccaagtggaaccagacgtttgtctactctcatgtccatcgcagggac
ttcaggaaccacatgctcgagctgacgatatgggaccaacccaggtcaccggacgaggac
agcacctttatgggagaggtcctgatagagctagagacggccttactggatgacaagcct
cactggtatccactccaaacccacgatgtctcatccattccactgccccaaccctccccg
tacctgccccgacgacacacagacgtccctggaaagaagctgcagcgttctcagcgtgta
acagagcctgaatttgatgaaggtacagcagtaatgtctaaaggcaagcagctgagggcg
tggcagggagaggcagcgggaagtcagcgtctaccctggaggtgccggaccagcagagga
tgcccccccatcacatacgctcccgctcggtgtccccgcaccgtgaggagcaggggcgca
tccgatcacggccccccaacgttcccgcccagaggagtttggatgatgagcttcctcaca
actcgtcgttctcagtttctccgacccgtcactacgactcctgccagaggtcgccaccag
caggaggagtacctggatgacagaaaatcgttttcccattccctgccccggagacgtccg
gcgagtcccaggattcttatccaacatgcttcccctgaagatgacaggcagcttcggacc
ctggagacacccgagtgtaacactcttggcagggatctccctatcagtggcagggggcat
ctccaaggtggtgcgtctctctcctcctcagtgacgtcctcctcagcccgcagagtacgg
cagctcccacagctcccccctaagagcagcagcgtagaacaagccctggtagcagaggag
tgtgttcgacagctccagatgagggttcattccaaccgggtgtcagctgccaccacctcc
agccaacaggacctggaccgctccctcaagaacaaacgggagctctacaaggaccagcgg
aggagcagtgagaacgtttcccataagtcctcagacagtgatgtcagtgacgtgtcagcc
atctctcgaaccagcagtgcctctcgcatcagtagcaccagctacatgtccatccagtca
gagagaccgcggggacgcttcagggccatgcgggcaacgggccgccacatgatgaagagc
accagcgtgagcggagagatctacggcatggaccacgccgacggcagccaatcagacacg
gcgctcgggagccttgggagcgggctcaagaagcggcgctcgagcctcagccaacgtgtt
gtcgacatcctgccatcgagacgcagccgcagcacctcacagctcagccagacagaggca
gcgggtaagacggtggaaagacagaaagctccagcaggtaaaaaggtgggtaagggcgcc
agcagcagcatccagaggagcgtggagacaggcatggcggtggagtacccgcgggggggg
tccaccatgaaccggcaggccagcagagagtccactgacggcagcatgaacagctacagc
tccgaggggaatctgatattctcaggtatgcggttgggggccgacagtcagttcagtgac
ttcctggacgggttaggccccggtcagctggtgggccgacaaacactggccacgcctgcc
atgggtgatgttcagatcggtctgatggataagaaaggccagctggaggtcgaggtgatc
agggcacgaggccttacctccaaagcaggctccaaatccctcccagctccctatgtcaag
gtttacctgctggataatggaacttgtaaagccaaaaagaaaactaagattgcacgaaag
accctggagccgctctaccagcagcacttgctctttgaggagagtccccagggcagggtg
cttcaggtgatagtttggggagactatggacgaatggaccacaaatgttttatgggtgta
gcacagatcctattggaggagctggacctctccagcacggtgatcagctggtacaaactg
tttccgccgtcctcattggtggaccctacattagctccgctcaaccggctggcatctcag
acgtcattggacatctcaggaccgccaccgggcgttcggtcctag
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