Pseudochaenichthys georgianus (South Georgia icefish): 117459417
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Entry
117459417 CDS
T09629
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117459417 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117459417 (lrit1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
Ig_2
fn3
LRR_14
C2-set_3
C2-set_2
LRR_EndoS
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-GeneID:
117459417
NCBI-ProteinID:
XP_033956089
LinkDB
All DBs
Position
15:25680410..25684270
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AA seq
651 aa
AA seq
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MFLVLLLGLYLGTGELFSPVSSCPSQCSCFYHNLSDGSKARSVICNDPEISLVPVGFPVD
TSKLRIEKTAIQRIPSEAFIYLSSLEFLWMSFNTLSALSPDSFRGLLNLEELRLDGNALT
AFPWDSLMDMPSLRLLDLHNNQLTSLPAEATTYIKNLTYLDLSSNSLLTLPAEVLSTWIV
AKPVQGPESSKMILGLHDNPWVCDCRLYDLIQFQKSPTLSVAFIDTRLRCSAPESVSGVL
FSDAELRRCQLPRIHTAVARVRSAVGNNVLLRCGTIGVPIPDLTWRKADGRQLNGTVQQE
TSKEGITWSILSVPAVSYRDSGKYICKATNYAGNAEAVISLVVSNSPKPEGNQTSNDKKA
KVKKPKPVGKAAYQEKLVAIYVVPTSTPSTLPALDPGLPPGLGPDPGLASYSLADRATLG
PATSSNPDALLDLEKTNLSNLAANTSSLQQDPDRVVRSVKVVGDTDNTISLNWRAPKAKN
TTAFSVLYAVFGERDMRKINVGAGQNRVFIEGLVPRTKYIACVCVRGLIPKKEQCVIFST
DEAASATSTQRLINVIVITVACIIAVPLTVIVCCGALKRRIQKYWGKKTKDIQDSYVTFE
TLSPGTKAKGLEGEYLNRVNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgtcctgctcctggggctttacttgggcacaggtgagcttttctccccagtg
agctcctgcccgtcgcagtgcagctgtttttaccacaacctgagtgatggatcaaaggcc
aggagtgtgatctgcaatgatcccgagatatctcttgtgcctgtcgggtttcctgttgac
acgtccaaactgcgcattgagaagacggccatccagcggataccgagcgaagccttcatc
tacctctccagtctggaattcctgtggatgtctttcaacacgctctccgccttgagcccg
gacagtttccggggactgctcaacttggaggagcttcgtctggacgggaatgccctcacc
gcctttccctgggactctctgatggacatgcccagtctcagacttctcgatttgcacaac
aaccagctcacctcgctgccagcggaggccaccacttacatcaagaacctcacctacctg
gatctgtccagcaacagcctgctgaccctgccggcagaggtgctgtccacctggatcgta
gcaaaacctgttcaagggccagagagctccaagatgatacttggtctccacgacaacccc
tgggtgtgtgactgtcggctctacgacctgatccagttccagaagtctcccactctctcg
gtggcgttcattgacacaaggctccggtgttcagctccagagagtgtatccggggttttg
ttcagtgacgcagagcttcggcgctgccagctcccacgtatacacacagctgtggcacga
gtccggagcgctgttgggaacaatgtgctgctgcgctgtgggaccattggagtccccatc
ccagacctgacatggcgcaaggcagatgggaggcaacttaatggaacagtccagcaggag
acctcaaaagagggaatcacttggtccatcctcagtgtccctgctgtgtcctatcgggat
tcggggaaatacatctgcaaggccactaactatgcgggaaatgctgaagctgtcatttct
cttgttgtgtctaactcaccaaaaccagaggggaaccaaaccagcaatgacaagaaagcc
aaagtcaagaaacccaagcctgttggtaaagctgcctaccaggagaaactggtggccata
tatgtggttccaacctcgaccccctcaaccctgcccgccctggatccaggccttccacct
ggtcttggtcctgatccgggactagccagttacagcctggcagacagagccaccctgggg
cctgccacctcctccaacccagatgcactgttggatctggagaagactaatctaagcaac
ctggcggccaacacgtcatcactgcagcaggaccccgacagggtggtccgctcagtaaag
gtggtgggggacacagacaataccatttctttgaactggagagcccctaaagccaagaac
acaacagcgtttagtgtgctgtatgctgtgtttggagagagggacatgaggaagatcaat
gttggggcagggcaaaaccgtgtattcatcgaaggcctggtgcccagaaccaagtacatt
gcttgcgtttgtgtgagggggctgatccccaagaaggagcagtgtgtgatattttccact
gatgaagcagccagtgcaacttcgacccagaggctgattaatgtgattgtgatcacggtg
gcctgtatcatcgcagtcccgctcactgtcatcgtgtgctgcggggctctgaagagacgc
attcaaaagtactggggaaagaaaaccaaggacatccaagattcatatgtgacctttgag
acgctgtcgcctggtacgaaggccaaagggcttgagggcgagtatttgaacagagtgaac
ccagaggaatccaacaggcttctgtcggcccgatccagcctggactctgaggccacggct
aagatagagggacaacctaacgagtacttctgctga
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