Pseudochaenichthys georgianus (South Georgia icefish): 117459452
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Entry
117459452 CDS
T09629
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgeo04054
]
117459452
Pattern recognition receptors [BR:
pgeo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117459452
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
LRR_6
PRY
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
117459452
NCBI-ProteinID:
XP_033956120
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All DBs
Position
15:38669738..38689267
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AA seq
1187 aa
AA seq
DB search
MNPCEDTEPALSGDPERLTKAQSPEQQHGPGPGPGPGPGPGPGPGPGPGPGPGPSCVSMK
SDQSIGAPIYFKGRPSETDYLFMIPHREDQQSSEVPRGQSAQQHQTQLDSTFMLLEDNII
TFVKNELKKIQVALSSDYPECLESQSEDEEVLDGEDEEQRRRSREAFLNISLHFLRSMKQ
EELAERLQSRSRSAVCQRKLKSNLKERFQCVFEGIAKAGNPTLLNQIYTELYITEGGSAE
VNDDHEVRQIETASRKPDRPETTIRQEDLFKASPGRDAPIRAVLTKGVAGIGKTVLTQKF
TLDWAEGKANQDIQFTFPFTFRELNVVRENKYSLVELIHHFFPETRDAGICRFDQFPVVF
IFDGLDESRLPLDFLNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIP
PECVDMVTEVRGFTDPQKEEYFRKRFRDQEQAGTIISHIKTSRSLHIMCHIPVFCWISAS
VLEEVLKTREGGELPKTLTEMYIHFLVVQSKVKNVKFDGGAETDPHWSPESRKMMESLGK
LAFEQMQKGNLIFYESDLTECGVDIRAASVYSGVFTQVFREERGLYQDKVFCFVHLSVQE
FLAALHVHLTFITSGVNLLSEEPTTFRLPKVFRPKPKLSHLYQSAVDQALQSPNGHLDLF
LRFLLGLSLQTNQKLLRGLLTETGSSSKTNQETVQYMKKKMDEDLSPERSINLFHCLNEL
NDGSLVEQIQQSLSSGRLSTDSLSPAQWSALVFILLSSGEDLDVFDLKKYSASEEALLRL
LPVVKASRKALLSVCNLSERSCAALSSVLSSQSSSLRELDLSNNDLQDSGVKLLSAGLES
PHCTLETLRLSVCKLSERSCAALSSVLSSQSSSLRELDLSSNDLQDSGVKLLSAGLESPH
CTLETLRLSGCLVSEEGCVSLASALSSNPSHLRELDLSYNHPGDSGEKLLSAGLEDPLWR
LDTLRMEPAGVRWLRPGLRKYSCELSLDTNTAQRELKLSEDDRKVTRVKEGQQPYPDHPE
RFDDWPQLMCREALTGRCYWEVEWRGGVHISVTYRGIRRRGNGGDCVFGENDQSWSLYCS
GGGYYVRHNKTLTHSSSSSSSSSSSSSSSSGRVAVYLDHPAGSLSFYRVSSDRLIHLHTF
RTTFTEPLYAGFWFSSGSSVSSVGGRVSSCSRDFLPAAQRVQSVQDQ
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctgtgaggacactgaacccgctctgagtggggaccctgaacgcctcaccaaa
gctcagagcccagagcagcagcatggacctggacctggacctggacctggacctggacct
ggacctggacctggacctggacctggacctggacctggacccagctgtgtgtccatgaag
agtgaccagtctataggtgcaccaatatattttaaaggccgcccttcagagacagattat
ctcttcatgattcctcacagagaggaccagcagagctcagaggttcccagaggtcagtct
gcccagcagcatcagactcagctggactccacatttatgctgctggaggacaacatcatc
actttcgtgaagaacgagctgaagaagatccaggtggccctgagttcagattacccagaa
tgcttagaaagccagagtgaggatgaggaggtgttggacggtgaggatgaagagcagagg
aggaggagcagagaggcatttctgaacatctcactgcacttcctgaggagcatgaagcag
gaggagctggctgagcgtctgcagagcagaagtcgttctgcagtgtgtcagcgtaaactg
aagtctaacctgaaggagaggttccagtgtgtgtttgagggcattgctaaagcaggaaac
ccaacccttctgaaccagatctacacagagctctacatcacagagggggggtctgcagag
gtcaatgatgatcatgaggtcagacagattgaaacagcatccaggaaaccagacagacca
gaaacaaccatcagacaagaagacctctttaaagcctcacctggaagagatgcaccaatc
agagcagtgctgacaaagggcgtggctggaattgggaaaacagtcttaacacagaagttc
actctggactgggctgaaggcaaagccaaccaggacatccagttcacatttccattcacc
ttcagagagctgaacgtggtgagagagaacaagtacagcttggtggaactcattcatcac
ttcttccctgaaaccagagacgcaggaatctgcaggtttgatcagttcccggtcgtgttc
atctttgacggtctggatgagagtcgacttcctctggacttcctcaacactgagatcctg
actgatgtcacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaag
ctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccct
cctgagtgtgtggacatggtgacagaggtccgagggttcactgacccacagaaggaggag
tacttcaggaagagattcagagatcaggagcaggcaggcaccatcatctcccacatcaag
acctcacgaagcctccacatcatgtgccacatcccagtcttctgctggatctctgcttca
gttctggaggaggtgttgaaaaccagagagggaggagagctgcccaagaccctgactgag
atgtacatccacttcctggtggttcagtccaaagtgaagaacgtcaagtttgatggagga
gctgagacagatccacactggagtccagagagcaggaagatgatggagtctctggggaaa
ctggcttttgagcagatgcagaaaggcaacctgatcttctatgagtccgacctgacagag
tgtggcgtcgatatcagagcagcctcagtgtactcaggagtgttcacacaggtcttcaga
gaggagagaggactgtaccaggacaaggtgttctgcttcgtccatctgagcgttcaggag
tttctggctgctcttcatgtccatctgaccttcatcacctctggagtcaacctgctgtca
gaagaaccaacaaccttcaggctgcctaaagtcttcagacccaaacctaaactctcacat
ctctaccagagtgctgtggaccaggccttacagagtccaaacgggcacctggacttgttc
ctccgcttcctcctgggtctttcactgcagaccaatcagaaactcctacgaggcctgctg
acagaaacaggaagtagctcaaagaccaatcaggaaaccgtccagtacatgaagaagaag
atggatgaggatctgtctccagagagaagcatcaacctgttccactgtctgaatgaactg
aatgatggttctctagtggagcagatccaacagtccctgagttcaggacgtctctccacg
gatagtctgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcaggagaa
gatctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctg
ctgccagtggtcaaagcctccaggaaggctctactgagtgtctgtaacctgtcagagaga
agctgtgcagctctgtcctcagtcctcagctcccagtcctctagtctgagagagctggac
ctgagtaacaacgacctgcaggattcaggagtgaagctgctgtctgctggactggagagt
ccacactgcactctggagactctcaggttgagtgtctgtaagctgtcagagagaagctgt
gcagctctgtcctcagtcctcagctcccagtcctctagtctgagagagctggacctgagt
agcaacgacctgcaggattcaggagtgaagctgctgtctgctggactggagagtccacac
tgcactctggagactctcaggctgtcaggctgtctggtctcagaggaaggctgtgtttct
ctggcttcagctctgagctccaacccctcccatctgagagagctggacctgagctacaat
catccaggagactcaggagagaagctgctgtctgctggactggaggatccactctggaga
ctggacactctcaggatggagcctgctggagtccgatggctgagacccggtctgaggaag
tattcctgtgaactctcactcgacacaaacacagcacagagagaactcaaactgtctgag
gacgacaggaaggtgacacgtgtgaaggaggggcagcagccatatcctgatcatccagag
aggtttgatgactggcctcagctgatgtgcagagaagctctgactggtcgctgctactgg
gaggtcgagtggagaggaggggttcatatatcagtgacttacagaggaatcaggaggaga
ggaaacggaggggactgcgtgtttggagagaatgatcagtcctggagtctgtactgctct
ggtggtggttactatgtcaggcacaataagacactgacacactcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctcctctggtagagtagcagtgtatctggatcatcct
gctggctctctctccttctacagagtctcctctgacagactgatccacctccacaccttc
agaaccacattcactgaacctctctacgctgggttctggttcagctctggttcctctgtg
tcctctgtaggaggaagagtctcctcctgttccagagacttcctccctgctgcccagaga
gttcagtctgttcaggatcaatga
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