Pseudochaenichthys georgianus (South Georgia icefish): 117459553
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Entry
117459553 CDS
T09629
Symbol
ccdc88ab
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117459553 (ccdc88ab)
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117459553 (ccdc88ab)
BRITE hierarchy
Motif
Pfam:
HOOK_N
KASH_CCD
DUF4472
Motif
Other DBs
NCBI-GeneID:
117459553
NCBI-ProteinID:
XP_033956298
EnsemblRapid:
ENSPGEG00000023591
LinkDB
All DBs
Position
15:complement(31744931..31817850)
Genome browser
AA seq
2019 aa
AA seq
DB search
MESEVFTPSLEQFMLTPLVCWVKTVGQATLTDGTQLSEYIELVDGIYLNEIMLEINPTAT
VQRTNKKVNNDPTLRIQNLSILIRQIKDYYQETLQQLVMMPLPNVLILGKNPLSEQGLEE
VKKLLLLLLGCAVQCEKKEEYIECIQTLDFDTKAAIASHIQEVTHNQENVVDMQWLESGE
MPPEDLDSLSRNLAFHLKRLVDERDTQLETIVELTQERDCVQLSPLASCQTQSPGDSPGM
RRTESRQHLSVELADAKAKIRRLRQELEEKSEHLLDTRQELDNSEGELKKLQQESYQLMS
DARSARAYRDELDALREKAIRVDKLESELSRYRERLHDIEFYKARVEELKEDNQVMLETK
SMLEEQLDASRQRSDKLHLLEKESLQLNSKIHDLEMERDMDRKRMEELLEENLVLEMAQK
QSMDESLHLGWELEQLSKTPDLTEAPQKSLGEEVNELTSSRLLKLEKDNQSLLKTVEELR
GAASQDTVTKLSKASQENQRLNHKLEQLVSELTSDRDSLRSAESLSTDLMKEKALLEKTL
ETLMENSERQLKGLEQENKHLGQTVSSLRQRSQVGAEARVKDVEKENRVLHESICETTAK
LNKMEFERKQLRKELEVVKEKGERAEELEIQIQRLEKDKESLQKKISSLTITCEKVCSLE
KENSELGAEGRRLKKKLDTLKNMAFQLEALEKENSQLEHENLEVRRLAESLRSSGAKAAQ
LEAENRELESERSQLKRSLELLKASSKKTERLEVSYQGLDTENQRLQKALENSSKKILQL
EAELQEVETENQSLQRNLEELKISSKRLEQLEQENKCLEQESCQLEKDKKYLEKENKRLR
QQAEIRDSKLDDDNQRIVTLEKENRTMGKEMIFFRDSCTRVKDLERENKELVKISNIDKK
TLNNLREELVSEKLRTQQMHNDLEKLTHELEKIGLNKERLLHDEGSDDRFRLLETKLEST
LKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPRG
GEAPQAVSKWEKESHETTRELLKVKDRLIEVERNNATLQAEKAALRSQLKQLETQSSNLQ
AQIVAVQRQTASLQENNTSLQTQNAKLQVENSTLSSKSGALMAQNAQLQTQQSSVEGERE
GALKDKEDLRSTYELLLRDHEKLAALHERQASEYEALIGKHGGLKTSHKSLEQQHRDLED
KYKQLMQRKGELEDLEKNLKEQQEKMALENQTHRSTADQFKLLKEEHDRLNNTHRQLVKD
NDNLQLDHKNAKTQLNSAKLEQTKLEAEFSKLKEQYQQLDITSTKLTNQCELLSQVKGNL
EEENRHLLDQIQTLMLQNRTLLEQTMESKDLYHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMKKLIKPKSRDRMRSLTLTPSRSEYGDGFLTLPPDCQDSSS
IGSGSNSLDDTLTQKKSSRRRGQQAHAQAGQGSTNALKRLPFMRNRSKDKDKAKAIYRRS
MSMNDLLQTMAVAGGPGAEWASSIDHLDGAEAGDRDTAGSNRRSGRSMKELAFSTNAIDY
STLTLPTARQSRAKLRLQVKDNASCEDVAGSLDDPKIQASRPPSLHSNRTISSNSNNNSH
LTSPLEGKGTLNGSLSRPHSESSGEFSLSLDQEVWSSSGSSPVQQPCSSRTSHQSPLQLR
RPLDPGQTPGRKTGSPACEVLSLQQFLDEGIDPAESGSQENLTEDSPRLSTSSEHVQKER
PVTKARGILRSASGKAAPVSSDRPPRSSGQPGRPTLRKAESTRVRGSVPLRSSLSSQGKA
TSVSGLLDSASSTLPRASSVISTAEGSTRRTSLHDLLSKDSRSPISVDTSPNGASTKAGV
RSQPTPSEYHPSSTDLKGPLTTTMPKSLSLPCHSLEDPDLSTLESFLGPSFTVESVFMDS
IFSESACLTHPFLSLNPSLVSNISGPPVTNKTHSPPPPPPPPPIPSQNEPHSQSNGQMRS
SPASVTEINEGLDPSGENNLEQSLNAEDNQSLWYEYGCV
NT seq
6060 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaggttttcacgccttcgctggagcagtttatgctcacgcctctggtctgc
tgggtgaagacagtcggccaggcgacactgaccgatggcacccaattatcggaatatatc
gaattagtggatgggatttacctgaacgagataatgcttgagataaatcccacggccaca
gtgcagaggaccaacaagaaggtgaataatgacccgacactgcgcatccagaacctttct
attctcatcaggcagattaaagactactatcaggaaaccctccagcagctggtgatgatg
cctttaccaaacgtgctgattctgggcaaaaaccctctgtctgaacaaggtctggaagag
gtgaaaaaactgttgctgcttctactagggtgtgctgtccagtgtgagaaaaaggaagag
tacatcgagtgtatccagactctggactttgacaccaaagctgccatagcatcccacatc
caagaggtcacccataatcaggagaacgtagtggacatgcagtggttggaaagtggggaa
atgcctcctgaagacctggacagcctctccagaaacctggctttccacctcaaacgcctg
gtggacgagagggacacacagctggagactatagtggagttgacccaggagagagactgt
gtgcagctctcccctctggcttcctgtcagacccagtctcctggtgactcgcccgggatg
aggaggaccgagagccggcagcacctctctgtggagctggctgatgccaaagccaagatc
agacgccttcgacaggaactagaggagaagagcgagcatcttttggacacgaggcaggag
ctggataacagtgaaggcgagctcaagaagcttcagcaggagagctaccagttgatgtcg
gacgctcggtcggctcgggcataccgcgacgagctggacgcgctcagagagaaggcgatc
cgtgtcgacaagctagagagcgagctgagccgatacagggagaggcttcacgacatcgag
ttttacaaggccagagtcgaggagctgaaggaggacaaccaggtcatgttggaaactaag
agcatgttggaggagcagctggatgctagcaggcagcgctccgacaaactgcacctcctg
gagaaagagagtctgcagctgaattccaagatccatgacctggagatggagcgggacatg
gaccgtaaacgcatggaggagctgctggaggagaacctggtgctggagatggctcagaaa
cagagcatggacgagtccctgcacctgggctgggagctggagcaactgtccaagacccca
gatctcaccgaagcccctcagaagtctctgggcgaggaggtgaatgagctgacctccagc
cgcctgttgaagctggagaaagacaaccagagcctgctgaagactgtggaggagctgaga
ggagcagccagtcaggacaccgtgaccaaactgtccaaagccagccaggagaaccagagg
ttgaaccacaaactggagcagttggtgagtgaactgacctcagaccgagactcgctccgc
agcgcagagtccctcagtactgacctgatgaaggagaaggctttactggagaagactctg
gaaacactcatggaaaactctgagagacagctgaagggtctggagcaggagaacaaacac
ctgggtcagacggtgtcgtctctgcgtcagcgctcccaggtcggagctgaggcccgggtg
aaggacgtggagaaagagaatcgagttctccacgagtccatctgcgagaccaccgccaaa
ctcaataagatggagtttgaaaggaaacaactacgaaaggagcttgaagtggtgaaggag
aaaggagagagagcagaagagctggagatccagattcagaggctggagaaggacaaggag
agcctgcagaagaagatttccagtcttacaatcacctgtgaaaaggtgtgttctttggag
aaggagaactcagagctgggggcagagggccgtcgtctgaagaagaagctggatactctg
aagaacatggccttccagctggaggctctggaaaaggaaaactcccagctggagcatgaa
aacctggaggttcggcgcttggcggagagtctccggtcatcgggagcaaaggccgctcag
ctggaggcggaaaacagggagctggagagcgagaggagccagctgaagcgcagcctggag
ctgctcaaagcctcgtccaaaaagacggagagattagaggtgagttaccagggcctagat
acagagaaccagcgcctgcagaaggctttagagaacagcagcaagaagattctccagttg
gaggctgagctgcaggaggtggagactgagaatcaaagcctccaacgcaacctggaggag
ctcaagatctccagcaagcgcctggagcagctggagcaggagaacaagtgtctggagcag
gagagctgccagctggagaaagacaagaagtacctggagaaggagaacaagcggctgagg
cagcaggccgagatccgagactccaagctggacgacgacaaccagcgcatcgtcaccttg
gagaaagagaatcggacgatggggaaggagatgatcttcttcagggactcgtgcacgaga
gtcaaagacctggagagggagaacaaggagctggtcaaaatcagcaacatcgataagaag
accctcaacaacctcagagaggagcttgtgagtgagaagctgcggactcagcagatgcat
aatgacctggagaaactcactcatgagctggagaagattggcctgaacaaggaaaggctg
ctgcatgacgagggttctgacgacaggtttaggctcctggaaacaaaactggagtcgaca
ctgaaatcatctctggagatcaaagaggagaagatcgcagcgctagaggccagactgcag
gagtcctccaacctcaaccagcagctacgccaggagctcaagacggtaaagaaaaactac
gaggcgctgcgtcagagggaggaggaggagaggatggtgcagagctcccccccgagagga
ggggaagcccctcaggctgtcagtaaatgggagaaagagagtcatgaaaccaccagagag
ctgctgaaggtcaaagacagactcattgaggtggagaggaacaatgccacgctgcaggct
gagaaggcggcgctgaggagccagctcaaacaactggagactcagagctccaacctgcag
gctcagatagtggcggtgcagaggcagactgcgtctctccaggagaacaacacgtcactg
cagactcagaacgccaagctgcaggtggagaactccaccctgagctcgaagagtggcgcc
ctcatggcccagaatgcccagctgcagacccagcagagcagcgtggagggggagcgagaa
ggagctctgaaggacaaagaggacctgaggtccacctacgagcttctcctccgagaccac
gagaagctggcagcgctccacgagaggcaggcgtccgagtacgaagccctgatcggaaag
catggcggcctgaagacctcccacaagagcctggagcagcagcacagggacctggaggac
aagtacaagcagctcatgcagaggaagggagagctggaggatctggagaaaaatctgaag
gagcagcaggagaaaatggcgctggagaatcaaacgcaccgatccacagctgaccagttc
aaactgctcaaagaagaacatgataggctgaataatacccatcgtcagctggtgaaggac
aacgacaacctccagctggaccataagaacgcaaagacccagctgaacagcgccaagctg
gagcagaccaagctggaggccgagttctctaaactgaaggagcagtaccagcagctggac
atcacctccaccaagctgaccaaccagtgtgagttgttgagccaggtaaaaggaaaccta
gaggaggagaatcgccatctgttggaccagatccagactctgatgctgcagaaccgcaca
ctgctggagcaaaccatggagagcaaggacctgtaccatgtagagcagagacaatacata
gacaagctgaatgagctgaggagacagaaagagaagctggaggagaagatcatggaccag
tacaagttctacgacccctcgcccccacgcaggcgtggaaactggatcactttgaagatg
aagaagttgatcaagccgaagagccgggacaggatgcgctctctcacgctgactccctct
cgttcagagtatggcgacggtttcctgacgcttcctccggactgccaggacagctcgtcc
atcggctctggctccaactcgctggacgacacactcacacagaagaagagcagcaggagg
agagggcagcaggcccatgcccaagctgggcagggttcaaccaatgctttaaaaaggttg
cctttcatgaggaacagatccaaggacaaagacaaggccaaggccatctaccggcgctcc
atgtccatgaacgacctgctgcagaccatggcggtggcgggtggtcccggcgctgagtgg
gcgagcagcatcgaccacctggacggagctgaggccggagacagagacacggcggggagc
aaccggcgtagcgggcggagcatgaaggaactcgccttctccacaaacgccatcgactac
tccacgctcaccctgcccaccgccaggcagagcagggccaagctccgcctccaggtcaaa
gataatgcttcatgtgaggatgtcgccggctccttagatgaccccaagattcaagcctca
agaccccccagtctccatagcaacaggaccatcagtagtaatagtaacaataactcccac
ctcacttctcctctggagggcaaaggcacgttgaatggcagcctgagccggccccacagt
gagagcagcggggagttcagcctgagtctggaccaggaggtgtggtccagcagcggcagc
agcccggtgcagcagccctgctcctccagaacctcccaccagagccccctgcagctgagg
aggccccttgacccgggacagacccccggcaggaagacggggtccccagcctgcgaggtg
ctgtccctgcagcagttcctggacgagggcatcgatcctgcagagtctggcagtcaggag
aacctcactgaggactccccccgcctctccacctcttctgagcatgtgcagaaggagcgt
cctgtcacgaaggcccggggcatcctccgctccgccagcgggaaagcggcgcccgtcagc
tccgaccgtcctccgagatcctccggtcagccgggccgccccacgctgcgtaaggctgag
agcacccgggtgaggggctccgtgcccctccgctcctccctgtcgtcgcagggcaaagcg
acgtccgtgtcgggactcctggactccgcctcgtccaccctgccccgcgccagcagcgtc
atctccaccgccgagggctccacgcggcgcaccagcctccacgacctgctctccaaggac
agccggtcccccatctccgtggatacgtctcccaacggcgcctccactaaggctggggtc
cgctcccagcccacacccagtgagtaccacccctccagcaccgacctaaagggacccctt
accaccaccatgcccaagtcactcagcttaccttgccatagcttggaggaccccgacctc
tccaccctcgagtccttcctcggcccctccttcactgtagagtccgtgttcatggactcc
atctttagtgagtcggcgtgcctaacccaccccttcctgtctctaaacccctccctagtc
agcaacatcagcgggccccctgttacgaataaaacacactctcctcctcctcctcctcct
cctcctcctatcccctcccaaaacgagcctcacagccaatcaaatggccagatgagatcc
agcccagccagtgtgacagaaattaacgagggccttgatcccagtggtgagaataatttg
gagcagtcactgaatgcagaggacaaccagtctctgtggtatgagtacgggtgtgtgtga
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integrated database retrieval system
