Pseudochaenichthys georgianus (South Georgia icefish): 117459575
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Entry
117459575 CDS
T09629
Symbol
pdzd8
Name
(RefSeq) PDZ domain-containing protein 8
KO
K24060
PDZ domain-containing protein 8
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117459575 (pdzd8)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
117459575 (pdzd8)
BRITE hierarchy
Motif
Pfam:
PDZ_6
C1_1
PDZ
PDZ_2
MMM1
GRASP55_65
C1_2
Motif
Other DBs
NCBI-GeneID:
117459575
NCBI-ProteinID:
XP_033956360
EnsemblRapid:
ENSPGEG00000017433
LinkDB
All DBs
Position
15:1171455..1255715
Genome browser
AA seq
1206 aa
AA seq
DB search
MIYLILISAFSGAVVTLILQFLLIYRRSPEPIGRTVQYVKVLPDNALKDYFNTQHAEPGQ
QQPDSTASRQQEAVSARQQEAAVSGGSPKQQPTPPSHEPGDAAKAETCHFLNAIFLFLFR
EFKETPVVRHWLTKKIKVEFEELLQTKTAGRLLEGLSLRDISLGNSLPVFKSAKLMKPIH
LNEDGMPEELNFEVDIEYNGGFHLAIDVELVFGKSAYLFVKMRRVVGRLRLQFTRTPFSH
WSFSFLEDPLVDFEVKSQFEGRPLPQLTSIIVNQLKRVIKKKHTLPNYKIRYKPFFPFQV
LPSLGSACDLDLSVQENKLVEGRLRVTLIECSRLFILGSYDRETYVHCTLELSSHQWKEK
TRSSIKQTEVIKGACGSVGMTFRHVPASEGDAVHVSIETVTPNSPAALADLQRGDRLIAI
GGVKVTSSVQVPKLLRQAGERVVVLYERPVRHQAHSFGGLGTLQEGFGQLEETGLIPQPG
GYEEDPAPITTLSDISDSKDIDSEFEELIVDSKLSQNVGPNSSTTNTSDAKEESLLTVNQ
SPKRTVASLASKPLGSISPILNRKLNLVGLQSPLKPQPKESPKPCPQRTNSDPVEGLQRP
TVPPPPPPSRPPVPPRPQIRLTSASSETSILEGIDSVTATNAAVAPTVTSSASEKSPEKA
PLTGANEDKAVTDKTCGKQAEVKQPTRPAESTDEPPGPPTVTSSSRADQAKDKASESSCS
TRDSLEDHSLWESPETLIRHQTARWPKASVVFEVENNQKYLNVALWCKDPFKLGSLLCLG
HVSLQLEHVALESMATSSAEYQSTFRLGPPEPRANVSRTALRSLSTHKGFNEKLCYGDVT
LNFCYLAEGELDYPGGLMEKEREGSLQDEDLREREREQIHTAQRDDLAYGAIQLVEVRHN
FQDTQFQNPTWCEYCKKKVWTKAASQCMICAYVCHKKCQDKCLTENPLCVAATERRGADP
EAKSTINRATTGLTRHIINTSSRLLNLRQVPKTRLVETVADLVPGTVEPSPKHTPNTSDN
ESSDTETYTSGASPSKQPVCSGGSSKLVRREGGLDDSVFIAVKEIGRDLYRGLPTEERSQ
KLELMLDKLQQEIDQELEHNNALLLEEREATDSRRKALISTALAKSGERLQALTLLMIHY
RAGIEDLESVESSSPSEQQGFKAKAVGLEEEALMGTEVYDSDICSPVEGQLLDNITEEQI
CVEALH
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgatttacttaatattgatttccgcgttctccggggcagtcgttacgttgatattacag
ttcttgctgatataccggagaagccctgagcccataggcaggacagtgcagtatgtcaaa
gtactgcctgataacgcattgaaggattactttaatacccaacatgccgagccaggccag
cagcagccggacagtacagcatccagacaacaagaggccgtgtccgcgcggcagcaggaa
gcggctgtcagcggcggcagccccaaacaacagccgacaccgccttcccacgagcccggg
gatgcggccaaggcagagacctgccatttcctaaatgctatattcctgttcctattcaga
gagttcaaagaaactcctgtggttagacactggctcaccaaaaagattaaggtggagttt
gaggagctactgcagaccaagaccgcaggacggctgctggagggactcagtctcagggac
atatccctgggtaattctctgccggtcttcaagtcggccaaacttatgaagccgattcac
ctgaacgaggacggcatgcccgaggagctcaactttgaggtggacattgaatacaatggc
ggcttccacctcgccatcgacgtggagctggtgttcgggaagtctgcctacctgttcgtg
aagatgaggcgcgtggtggggaggctgaggctgcagttcacgcgcacccccttctcccat
tggtccttctccttcctcgaggacccgctcgtggactttgaggtgaagtcccagtttgaa
ggaaggcctctgccccagctcacctccatcatagtgaaccagctgaagcgggtcatcaag
aagaaacacaccctgcccaactacaagatcagatacaagcccttcttcccgttccaggtg
ctgccctctctgggttcagcttgtgatctggacctatccgtccaggagaacaagctggtg
gaaggccgactcagagtcacgctcattgaatgtagcagactgttcatcctgggctcctat
gacagagaaacctacgtccactgcaccctggagctgagcagccaccagtggaaggagaag
acccgcagctccatcaaacagacggaggtgatcaagggggcgtgtggcagcgtggggatg
acgttcagacacgtccctgccagtgagggggatgcagtgcacgtcagcatcgagacagtc
acacccaactcccccgcagccctggcagacctgcagaggggagatcggctcatcgccatt
ggaggagtgaaggtgacgtcttcagttcaagtgcccaaactattgaggcaggccggagag
agggtggtggttctttatgagaggcccgtccgtcaccaggctcactcttttggaggcctt
ggaactcttcaggaagggtttgggcagctagaggaaacaggacttattcctcagccgggg
gggtatgaagaagacccagctcccatcaccaccctctctgacatatcagacagcaaagac
atagactctgagtttgaagagttgattgtggactccaaacttagccagaatgttggccct
aacagcagcaccacaaacaccagtgatgctaaggaggaatccttactcaccgttaaccaa
agccccaaaaggactgtggccagcctggcctccaagcccctcggttccatatcccccata
ctcaaccgcaagctaaacctggtgggtctccagtcgccactaaagccccaacccaaagaa
tctccaaagccctgtccacaaaggaccaatagtgatccagtggaaggtctgcaacgtccc
actgtccctcccccacctcctccttctcgccccccagtgccgccaagacctcaaataagg
ttgacatcagcctcttcagaaaccagtattttggaaggcattgattctgttacagctaca
aatgctgctgtggctcctaccgtgacttccagcgcttctgagaaatctccagaaaaagct
cctctcactggagccaatgaggacaaagctgtcactgataagacctgtggcaaacaggct
gaggtgaagcagcctaccagaccagcagagtccactgatgagccgcctggcccccccact
gtgaccagcagcagcagagctgaccaggcaaaggacaaagcttcagaaagctcctgcagc
acacgggacagtctggaggaccactccctctgggaatccccagaaacccttatccgtcac
cagaccgcacgctggcccaaagcctctgtagtgttcgaggtggagaacaaccaaaagtac
cttaatgtggccctgtggtgcaaagatccctttaagttgggcagtttattgtgcctgggt
cacgtcagcctccagctggagcatgttgccctggaatctatggccacatcttcagcagag
taccagagcaccttcaggctggggcctccggagccaagggccaacgtcagccgcactgcg
ctgcgcagtctcagcacccacaaaggcttcaatgagaagctgtgttacggagatgttact
ctgaacttctgttacctcgccgagggggagctagactatccaggagggctgatggagaag
gagcgagagggcagtctccaagatgaggatctgagagagagggagcgggagcagatccac
actgcgcagcgggatgacctggcatatggagccattcagctggtggaggttcgccacaac
ttccaggacacacagttccagaacccgacgtggtgtgaatactgcaagaagaaggtttgg
acaaaggccgcctctcagtgtatgatctgcgcctacgtatgccacaagaagtgccaggac
aagtgcctcactgaaaaccccctctgtgtggcagccactgagcgccgcggagctgaccct
gaagccaaatccaccatcaaccgggccaccaccggcctcacccgccatatcatcaacacc
agctcccgtctgctgaacctccgccaggtgcccaaaactcggctggttgagacggtggct
gacttggtgcctgggacagtggagccctcacccaagcacacccccaacacttcagacaac
gaaagcagcgacactgagacctacactagcggggccagcccctcgaagcagcctgtgtgc
agcgggggcagcagcaaactcgtacgcagggaaggcgggctggatgacagcgtgttcatc
gctgtcaaggagataggccgcgacctgtaccgggggctgcccacagaagagcgctcccag
aagctggagctgatgctggacaagctgcagcaggagatcgatcaggagctggagcacaac
aacgctctcctgctggaggagagggaggccacagattcccgccgcaaggccctcatcagt
actgccctggctaagtctggggagaggctccaggccctcaccctgctgatgatccactac
cgggccggcatcgaggacctggagtcagtggagagctcctccccttcagagcagcagggc
tttaaagcaaaggcagtggggctggaggaggaggccctgatggggacggaggtgtatgac
agtgacatatgcagccctgtggaggggcagctgctggacaacatcactgaggagcagatc
tgtgtggaggctctgcactga
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