Pseudochaenichthys georgianus (South Georgia icefish): 117459596
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Entry
117459596 CDS
T09629
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117459596 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117459596 (gbf1)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
117459596 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
117459596
NCBI-ProteinID:
XP_033956412
LinkDB
All DBs
Position
15:2164398..2310856
Genome browser
AA seq
1850 aa
AA seq
DB search
MVDKNIYIVQGEISTVVGAIKRNSRWNTHTPLDEEQDPLLNSFAHLKETLNYIKELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSYVGANMKKLKMRAGGMSESSKWKKQKRSPRPPHHM
VRSPSGQMDPTQPSTLSNNNLSGGVPFIECSDSAASSVSSPTTTDSGLDTCSKATSREDL
SDLEPCSSSATMLPGSEPGSPDAQSEGSQVGPAQSASVESIPEVLGDKDNATDQSDSASI
HDMDYVNPRGVRFTQSTQRDGASIIPYGLPCLRELFRFLISLTNPHDRHNTDAMMHMGLQ
LLTVALESAHFTNYQSLLGLVKDELCRHLFQLLSVDRMNLYASSIRVCFLLFESMRVHLK
FQLEMYLKKLMDIITSENMKMPYELKEMALEALVQLWRIPSFVTELYINYDCDFYFSNLF
EDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQVKVLNSSAQQDHTDTLQAE
GENSRDGTDTTTDLNRQGSTNGLSLPQAEDAPVCPPTSGHLMAEKMRLGREDQGDYDPAE
KSASKKPQRFSSCLPDSQELMDIRTKKKLLITGTEQFNQKPKKGIQFLQEKGLLGNPIDN
NQVAQWLRENPRLDKKMIGEFVSDRKHMELLDSFVNTFGFQGLRIDEALRLYLEAFRLPG
EAPVIQRLLETFTDNWHKVNGSPFMTNDAGFALAYAVIMLNTDQHNHNVRKQNIPMTIEQ
FRKNLKGVNGNKDFDQDMLEDIYNAIKNEEIVMPDEQSGLVKDNYVWSVLLHRGATPEGI
FLHLPAGSYDHDLFTMTWGPTIAALSYVFDKSLDENIIQKAITGFRKCAMIAAHYGFSDV
FDNLIISLCKFTTLSSESVENLPTVFGSNNKAQTAAKTVFDLAHRHGNILREGWKNIMDS
MLQLFRAELLPKAMVEVEDFVEPNGKISLQREETPSNRGESAVLSFVNWLTLSGAEQSGL
RGPSTENQEAKQAALLCIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETYDEEDA
AFCLEMLLRIILENRDRVSCVWQTVRDHLCHLCVHPNESCFLVERAVVGLLRLAIRLLRR
EDISSQVLHSLRLLLMMKPHVLSRVSREVAYGLHELLKTNAANIHCTNDWFTLFSLLECI
GAGVKPPASFQLSSTQSDHDAGAQSDSELASHHVSEVDSERGYTSDSGVYTEHSKTRVPR
SATDLDVASSGWLLVGKDDTAANSKAQLNNPLVNQYSLTLGQDLGQHDTKSLIKCVETLS
FIVRDAAHVTPDNFELCVRAIRVFVEASLNGGYRNHDKKKSHKYDSSKSRMRKKAGGRDK
EGGGGTRRGGSRVSSQRPSRSHSDEEEDEGVPASYHTVSLQVSQDLLDLMHTLHTRAASI
YSSWAEEQRHLEAAGRRIEADSQTLWSSCWCPLLQGIAWLCCDARRQVRMQALTYLQRAL
LVHDLQTLDATEWESCFNKVLFPLLTKLLDNISPADVGGMEETRMRACTLLSKVFLQHLS
PLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSADSRTG
YSDLWEITWERIDCFLPLLREELFKQTVIAVVPDPGLSPPAESVQPTPSAGQPSSPRVSQ
PPSPLPVSPAETRTPSRPESPLEPPAASANGSDCSSPTPASTSPMPVPLTTSPPLASSPR
SQPPFILQPLASPLQVGVLPMSLPIILNPALIEASSPVPLLPPPRPDEVK
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaacatctacatcgtccagggtgagattagtaccgttgttggagctatc
aagaggaactccaggtggaatacccacactccactggatgaagagcaggaccctctactt
aacagctttgcccacctgaaagaaaccctcaactacattaaagagctctcagatgtggaa
cccaacgtttttctcaggcccttcctcgaggtggtccgctctgaggacaccactggacca
atcacaggcctcgcccttacttctgtcaacaaattcctctcctacggccttatagatgct
aaccatgaagcagcagcagaggccatagagaacatggccgacgcagtcacacacgctcgc
tttgtgggaaccgaccctgccagcgatgaagttgtccttatgaaaattctgcaggtcctc
aggactctgctgctcacaccggtcggagcccacctgaccaacgagtcggtctgtgagatc
atgcagtcctgcttcaggatctgctttgagatgcgtctgagtgagctcctcaggaagtca
gctgaacacacactggtggacatggtgcagctcctgttctccagactgccgcagttcaaa
gaggaggccaagagttacgttggtgccaacatgaagaagttgaagatgcgcgccggtggg
atgagtgagtcatccaaatggaagaagcaaaagcgttcaccgaggccgcctcaccacatg
gtccgaagtccctccggtcagatggaccccacccagcccagcaccctcagcaacaacaac
ctctcaggcggcgtcccgttcatcgagtgctcagacagtgctgcttcgtcagtctccagc
cctacaaccacagacagtggcctggacacctgctccaaagccacctccagggaggacctc
tccgacctggagccctgcagctcctctgccaccatgcttcctggctctgagcctggctct
ccagatgcacagtctgagggcagtcaagttggaccagctcagtcggcctcagtggagtcc
atccctgaggttctgggggacaaagacaacgctacggatcagtcagacagcgcctctata
catgacatggactatgtcaacccacgtggagtgcgctttactcagtccacacaaagagac
ggagcgtccatcatcccttatggcttgccatgtctgagggagctcttccgcttcctgatc
tccctgaccaacccccacgaccgccacaacactgacgccatgatgcacatgggcctgcag
ctgctgactgttgcactcgagtcagcacacttcactaactaccagtctttactgggactg
gtcaaagatgagctctgcagacaccttttccagctgctgagtgtggaccgtatgaatctg
tatgcttcctccatacgagtttgcttcttgctttttgaaagcatgagagtacatctgaag
tttcagcttgagatgtacttgaagaagctgatggacatcatcacttcggagaacatgaag
atgccctacgagctgaaggagatggctctggaggctctggtccagctgtggaggattcct
agctttgtcactgagctgtacatcaactatgactgtgacttctacttctccaatctgttc
gaagacctcaccaagctgctctccaagaatgcgttcccggtgtcggggcagctgtacacc
acccacctgctgtctctggaggccctgctcactgtgatcgacagcactgaagcccactgc
caggtcaaggtgctgaacagcagcgctcagcaggaccacacagacaccctgcaggcagag
ggagagaacagcagggacgggaccgatactacaaccgatttgaacagacagggcagtacc
aatggtttgagtcttccacaggctgaggacgccccggtgtgtccaccaaccagtggacat
ctgatggcagagaagatgagactgggccgagaggaccaaggggattatgaccctgctgag
aagagtgcctcgaaaaagcctcaacgcttctcttcatgtttacctgattcccaagagttg
atggacattagaacaaagaaaaagctactgatcacaggcacagagcagttcaaccagaag
cccaagaaagggatccagttcctccaggagaaaggtcttctcggtaacccaatagacaac
aaccaggtggcccagtggctccgagaaaaccctcgactggacaaaaagatgatcggcgag
tttgtcagcgatcgcaagcacatggagctcctggacagctttgtaaacacattcggcttc
caggggctccgtatcgatgaggccctgcggctctacctggaagccttcagactcccagga
gaggctcctgtcatccagagactcctcgaaacctttacagacaactggcataaagtgaat
ggctctcctttcatgaccaacgatgcgggcttcgccttggcctacgctgtcatcatgctg
aacactgaccagcacaaccacaacgtccgcaagcagaacatccccatgaccatagagcaa
tttaggaaaaatctgaagggagttaatggaaacaaagactttgaccaggacatgttggag
gatatctacaatgctatcaagaatgaggagattgtgatgcctgatgagcagtcggggtta
gtgaaggataactatgtgtggagtgtgttgctacaccgaggcgccacacctgagggtatt
ttcctccacctgcctgctggcagctacgaccatgacttgtttaccatgacctggggtcct
accatcgctgccctctcctacgtcttcgacaagagccttgacgagaacatcatccagaag
gccatcactggcttcaggaagtgtgcaatgatagcggctcactatggcttcagtgatgtt
ttcgacaatttgatcatctccctctgcaagttcaccaccctgagcagtgagtctgtggag
aacctccccacagtgttcggcagtaacaacaaggcccagacggcagccaagacggtgttt
gacctcgcccatcggcacggcaacatcctgagggagggctggaagaacatcatggactcc
atgctccagctgttcagagccgagctgctgcccaaagccatggtggaggtggaggacttc
gtggagcccaatgggaaaatctctcttcaaagagaagaaacgccttcaaatcgtggtgag
tcggcggtgctgagttttgtgaactggttgactctgagtggagccgagcagtcgggactg
agagggccgtccacggagaaccaggaggccaagcaggccgccctgctctgcatcaagcaa
tgtgacccagaaaagctgatcacagagagcaagtttctccagctggagtctctccaggag
ctgatgaaggctctgatatcagtcaccccagatgaagagacctatgatgaagaggatgct
gccttctgcttggagatgctgctgcgaatcatcctggagaaccgagaccgtgtgtcatgt
gtgtggcagacagtgcgggaccatctctgccatctctgtgttcaccccaacgagagctgc
ttcctggtggagagggccgtggtgggactcctccgcctcgctatccgactgctgcggcgt
gaagacattagctctcaggtcctccactcactgcgcctcctgctgatgatgaagcctcac
gtcctgtcccgggtcagcagggaggtggcctatggcctccatgagctactgaagactaac
gcagccaacatccactgcaccaacgactggttcacactcttctccctgctggagtgcatc
ggagctggagtcaaacctcccgcctccttccagctctcctccacccaaagcgaccacgac
gcaggggcgcagtcggacagcgagctggcgtctcatcatgtcagcgaagtggactcagag
cgcggctacacctcagactcaggagtctacacggagcacagcaagaccagggtccctcgc
tctgccacagacctggatgtagcaagcagcggctggctcctggttgggaaagatgacact
gcagcgaactctaaagctcagctcaataaccccctggtcaaccagtacagtctgactctg
ggtcaggacctgggccagcatgacaccaagtctctcatcaagtgtgtggagacgctgtcc
ttcatcgtccgtgacgcagcccatgtcacccctgataactttgagctgtgtgtccgcgct
atacgagtgtttgtggaggccagtctcaacggaggttaccgcaaccacgacaagaagaag
agccacaagtacgactcgtccaaatcccggatgaggaagaaggcaggggggagagacaag
gaggggggaggaggcacgaggcgagggggcagccgggtgtccagccagcgtccatcacgt
tcccatagcgacgaggaggaggacgagggagtgccggccagctaccacacggtgtcatta
caggttagtcaggaccttctggatctgatgcacacactgcacacccgggctgccagcatc
tacagctcctgggcggaggagcaacgccacctggaggcggccggccggaggatcgaggcg
gactctcagactctgtggagcagctgctggtgcccgctgctgcaaggcatcgcgtggctg
tgctgtgatgccaggcgtcaggtgcgtatgcaggccctcacctacctgcagagggcgctg
ctggtgcatgacctgcagactctggacgccacagagtgggagtcctgcttcaataaggtg
cttttccccctgctgactaagctgctcgacaacatcagcccagcagatgttggggggatg
gaggagaccaggatgagagcatgcaccctcctgtcaaaggtgttcctgcagcacctctct
cctctgctctctctgcccaccttcgccgccctctggctcaccatcctggacttcatggac
aaatacatgcacgcaggatccagtgacttactattggaggccatccctgagtctctgaag
aacatgctgctggtgatggacacagcggggatcttccacagcgctgactcccggaccgga
tactctgacctgtgggagatcacctgggagcgcattgactgcttcctgcctctcctgagg
gaggagctcttcaaacaaaccgtcatagcagtggttccagacccaggactcagtcctcca
gcagagtctgtgcagcccacaccctcagcaggtcagccttcctccccccgggtttctcag
ccgccctccccattgcctgtgtcccctgcagagaccaggacccccagcaggccagagtct
ccccttgaacccccagcagccagtgccaacgggtcggactgctcctctcccaccccagcc
tccacctcccccatgccggtgccgttaacaacctccccccccctggcttcctccccccgg
agccagccccccttcatcctgcagcccctcgcctcccctctgcaggtgggagtcctgccc
atgtccctgccaatcatcctgaaccccgccctcatcgaggcatcgtcccccgtccccctg
ctccccccgcccagacctgatgaagtcaagtaa
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