Pseudochaenichthys georgianus (South Georgia icefish): 117459641
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Entry
117459641 CDS
T09629
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117459641
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
117459641
NCBI-ProteinID:
XP_033956557
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Position
2:complement(9421181..9425810)
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AA seq
703 aa
AA seq
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MLLWIVLLNAALCVAGGNVTRDICKEQICSCNEIEGDLHIDCEKRSLTTLQHLTGPSSHF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FRKSTFLGLDDLEYLQADFNLLRDVDPAVFRDLNKLEVLILNDNLISALPINVFQHVPIT
HLDLRGNRIKTVPYEGVLEQIPGIAEVLLEDNPWDCNCDLVSLKEWLENIPHNALIGRMI
CEAPTRLQGSDLNETSEADLCPSQSGSVDTSLVAPPTQEEASESEAQVPRPTPYKPNRDT
SGPPTPGHGPKSRSKSRENWQLKTRPTPVVSGENGDRELPHNMTCPQPCKCKLIGTRQGL
GVLCEGNKIESLSNLKPKPLAAHELNMRNNNIHAVKKNHLLGYTSLNLLDLGGNNIKVID
NSTFINQSELRWLYMDKNYLDTLIAEMFVGLGNLEYLSLEYNDIQMIVAGAFSPMPNLRV
LFLNNNLLKSLPNDAFLGISLSKISLHNNYFPYLPVPGVLDQLNSIIQIDLHGNPWDCSC
NIVPFKQWADKLGDDVIVSDLKCESPEEFWKQDFRQVRNDLMCPKLLDKVSPTPLSKNST
FTQDSGTRSNSYLEPNRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRRDGNSS
ASEINSLQTVCDSSYWHSGPYHADGGAHRGFDCSTHLSTTNDA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttggattgttctgctgaatgcggctctttgtgttgcgggtggaaatgtgaca
agggacatttgtaaggagcagatatgctcttgcaacgagatcgagggagatctgcacata
gactgcgaaaaaaggagcctcaccactctgcagcatttgactggcccgagctcgcatttt
tatcacctgctgttgcacgggaattctctatccaggctatttcccaacgagtttgccaac
ttttacaatgctgtgagcttgcatttggaaaacaatggcttgcacgacattgtccccggc
gcctttctgggactgcagctggtgaaaaggctgcacatcaataacaataagatacgatcc
ttccggaagagtacatttctggggttagacgacttggaatatctccaagctgatttcaat
ctactgagggacgttgaccccgccgtgttcagggacctaaacaaacttgaagtgttaata
cttaacgacaacctcatcagtgcgctacctataaacgtgtttcaacatgtgcccattacg
catctcgacttgcgggggaacagaatcaaaacggtgccttatgagggggtccttgagcaa
ataccgggcattgcggaggttttgttggaggacaacccatgggactgtaactgcgacctg
gtttctctgaaggaatggctggagaacataccgcataacgctcttatcgggaggatgata
tgcgaggctcccaccaggctgcaggggagcgacctgaacgagacgtcagaagcggacctg
tgtccttcacagagcggcagcgtggacaccagcctggtcgcccctcccacccaggaggag
gcctctgagagcgaggctcaggttccccgtcccacgccttacaagcccaacagagacacc
agcggccccccaacgcctggccacggacccaagagccgctccaaatctcgtgagaactgg
cagctgaaaacgaggccaactcctgtggtgtcaggtgagaacggggacagagagctgcct
cacaacatgacgtgcccccagccttgcaaatgcaagctgatcggcaccagacagggcctg
ggggtcttgtgcgagggcaacaagatcgaaagcttatccaacctcaagcctaaacccctg
gctgcacacgagttgaacatgcgaaataacaacatacacgcagtgaaaaagaaccacctg
ctcggctacaccagcctcaacttgcttgatctgggggggaacaacatcaaggtgatcgac
aacagcacttttataaaccagagcgagctcagatggctgtatatggataagaactatctg
gatacgctgatcgcagagatgtttgtgggcctcgggaatctggaatatctcagtttggaa
tacaacgacatccagatgatagtggcaggtgcattcagccctatgcctaatctgagggtc
ctgttcctcaacaacaacttgctgaagtctctaccaaacgatgctttccttgggatttct
ttgtccaaaatcagtcttcataataattacttcccctatctgcccgtgccgggagtgtta
gaccagctcaattcaatcatacaaatcgatttgcacgggaatccgtgggattgctcgtgc
aacatcgtgcccttcaagcagtgggcggataaactcggggacgatgtgatagtgagcgat
ctcaaatgcgagtcacccgaagagttctggaaacaagatttccgccaagtccggaacgac
ctcatgtgccctaagctccttgacaaagtctcccccacacccctgtccaaaaacagcact
ttcacccaggactcggggacgcgctcaaactcttatttggagccgaacagggtctcaatc
tctgtgctcgtccccgggttgctgttggtgttcgtcacgtccgcttttactgtcgtgggg
atgcttgtgttcatcttgcggaatcgaaagcgatcaaagcggagggacgggaactcctcc
gcctcggagatcaattccttgcagacagtgtgtgactcgtcgtattggcacagtgggcct
tatcacgcagacgggggcgcgcacaggggcttcgactgcagcacgcacctttccacgaca
aatgatgcgtaa
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