Pseudochaenichthys georgianus (South Georgia icefish): 117459649
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Entry
117459649 CDS
T09629
Symbol
lrpprc
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117459649 (lrpprc)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
117459649 (lrpprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_3
PPR_long
PPR_1
TPR_19
ATP13
TPR_24
ARM_TT21
RRP36
Motif
Other DBs
NCBI-GeneID:
117459649
NCBI-ProteinID:
XP_033956567
LinkDB
All DBs
Position
15:32394638..32469289
Genome browser
AA seq
1431 aa
AA seq
DB search
MSFHCATSENMAALLRSARLLKCSPLGLLQISCTKRTGPPFRLLFSGPLGARGTGVCSRH
ISPVSGNASSRVWPYTAGCVRNYALATEQKDEPGVTMRSNQAQQFDWALAKLDSSVRRTG
RITETQLTRIFQDICKTGYSSGNQALLLLRSCGSLLSEVPLEQRTELAHRVWEKLQELGA
VYDVSHYNALLKVYLQNEFKFTPTDFLAKMDAANVQPNRVTYQRLIAAYCQNGDIEGAST
ILGFMKSKDLPITEAVFNSLVTGHAQAGDIESAKTILTVMKGAGIEPGPDTYVALLNAYA
EKGDLDNLKKTIEAAESAECSLMDRDLMPVIFTLAKAGHEEHIPHMVERLRHERGYVPDA
MNLCLSLITQGLEDTAFYILKNFPNLQSDDYKNEANLGNFFLRHCVNIDMSLEKICSFCK
ELQESKLHAAPISFTLSVALETKKTAIALALMKMLKELDLPIRPHYFWPLLIHHVKGKNT
AGVVEVLIAMQDLKIEPDSETLSHYVFPAFADIEEARRILKDAGLSLAPEGFFNSKIRSL
AVYNLAELYILLSDPSCPATELSVFRGSLIFGFKKSSDVESMVKITELLSKDQRFSKEGT
KASDTSSYFLYSFIDSMSEGEVHANEDKLRKYFNQLKDQNISVTLNIFRGIRNLLQSYEA
QELIKDVVALVGHDGFGSDALRGTGAEGRVYALEKRSSPKGKQRTKPFGNILKQTIQSLV
ADENLVRALELKQEHEEEMVTPAYASLIGLCCRHDNVEEALNLKREMTRKDSSVKLDGTK
YIALVQCLAKSDRIEEAVDFLKEMKEKEVVLNDKHITLFFHMLFSLATKGGAPTVQRLQD
SMFTLGLVKPNSNLLSPLVSAYIESEDLSGALEAAMDCQKRYNHMPSIHRIVVALVEKGD
TDLLQKAMDFVSQERGEMAMLYDLFFAFLQTGRYREARKIIETPGLRARAARIQWYAEKC
INSNQIEPLEQMVDMTDKLFECDRDEMYSYLLRQYEATNEWKKAEGLWTKMQEENVIPRE
RTLLMLAKILKNNGQEVPFDVPETWYQEEAPPAKRAAPKVEEGPRSQGTSFQSPIIALCK
NNKAQEALKICKEANDNGLAFNAIRYDYLIRSLLAEGSLNDAMAVKDIATSHLPTFQLSP
AANDLYIITNSKKGQANDALERTRSLLQAGQTPSELAIIRLVQALGNSGNVSGIQEVQAL
ISGHSKEVNLSSMIFVNNTAMAHIKSGDVESAIEALEAIYTNPDTQSQSMAFVFRKILED
NNEKALDKLSAMAERIANHFACYRPASDLFVQLLDADKVEDAKFMLARINALAEQTDVLV
SYMSQKSQIPGQLGKIKTLQSLIPDFADKDVVNTYLMKCHVTDKDFSSAKALYEEWQKSG
GEIDELSLKRLAMMYRGSGEMVPFEEPPESFRFYADQLKERRTQSEKKAET
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccactgtgcgacatcagaaaacatggctgcgctcttgagatcagcccggtta
cttaagtgttcgcctttgggcttgcttcagatctcatgcaccaaaagaaccgggccgccc
ttccgcctgctgttcagcggacctctcggcgccagagggaccggagtttgttcccgacac
atcagccctgtttcgggaaacgcgtccagtcgcgtgtggccctatacagcggggtgtgtg
cgtaactatgccttggccacagagcagaaggatgagcccggcgttacgatgcggtccaat
caggcgcagcagttcgactgggctctggccaagctggacagctcagtgaggagaaccggt
cgcatcaccgagacccagctgacccgcatcttccaagatatctgcaagacaggttattcc
agtggtaaccaggccttgttgctgctgcggagctgtggctctctgctgtcggaggttcct
ctggagcagcgcactgagctggctcaccgagtgtgggagaagctgcaggagctgggtgcc
gtgtatgatgtgagtcactacaacgccttgctgaaagtttacctgcagaatgagttcaag
ttcacccccactgacttcctggccaagatggatgcagctaacgtccagcccaacagagtt
acctaccagagactcattgcagcatactgccaaaatggagatatcgagggagcaagcacc
atactgggtttcatgaagagcaaagatttacccatcactgaggccgttttcaactccctg
gtgacaggccatgcccaagcaggggacatcgagagtgccaagaccatcctgactgtgatg
aagggagcaggaattgaacccggtcctgatacttatgtagcgctgcttaatgcctacgct
gagaagggagacctggacaatttgaaaaagacgatcgaggcagcagagagtgcagagtgc
agtctgatggacagagacctcatgccggtcatcttcactctggccaaggccggacacgag
gagcacataccacacatggtggagcgcttgaggcatgagagaggatacgttccagatgcc
atgaacttgtgcctgagcctcatcacacagggcctggaggacacagctttttacatcctg
aagaatttccccaacctgcaatctgacgactacaaaaacgaagccaacctgggcaacttc
ttcctcagacactgtgttaacatagacatgtcactggagaagatttgcagcttttgcaaa
gagctgcaggagtctaaactgcacgctgcgcccatcagcttcactctgtccgtcgctctg
gagaccaaaaaaacagctatcgctttggcgctgatgaagatgctgaaggagctggactta
cccataaggcctcactacttttggcctctccttattcatcatgtgaaaggcaaaaacaca
gctggagtggttgaggtgttgatcgccatgcaggatcttaagatcgaacctgatagcgag
actttatcccactacgtcttccctgccttcgccgacattgaagaagctcgacgtatcctc
aaggatgcaggcctctctttggcaccagagggcttctttaattcaaagatccgctcactg
gctgtttacaacctggccgaactatacatcttgctgtcggatccatcctgcccggcgaca
gagctcagtgttttccgtggcagcctcatcttcggcttcaaaaagtcctctgatgtggag
agcatggtgaagattactgagctcttgtccaaagaccagcgcttctcaaaagaaggcaca
aaggcttctgatacttcttcctacttcttgtacagctttatcgacagcatgtcggagggg
gaggtgcatgcaaatgaagacaagctgcggaaatacttcaatcaactaaaagatcagaat
atatctgtgacactgaacatcttcagaggcatcaggaacctgctgcagtcctacgaagcc
caagagctcatcaaggatgtggttgctctggtgggccacgatggctttgggtcagatgct
ctccgtggcactggggctgagggccgggtgtatgctctggagaagagaagctcgccaaaa
ggaaagcagagaaccaaaccatttggcaacattctcaaacaaaccatccagagtctcgtc
gctgacgagaacttggtgcgcgccctggagctgaagcaggagcacgaggaagagatggtg
acccccgcatacgccagcctcatcggcctgtgctgtcgccacgacaacgtggaggaggcg
ctcaacctgaagagggaaatgactcgtaaggactcgtcagtgaagcttgatggcactaaa
tacatcgcactggtccagtgtctcgcaaagagtgacagaatcgaggaggcagtggacttc
ctgaaggagatgaaagagaaggaggtggtgttaaatgacaaacacatcacgctgttcttc
cacatgctcttttctctggcgaccaagggtggcgcccccaccgttcagcgcctgcaggac
tccatgttcaccctcggactggtcaagcccaactccaacctcctctcacccctggtttct
gcatacatcgagagcgaggacctgtccggagctctagaagcagccatggactgtcagaag
cgctacaaccacatgccttcaatccaccgcatcgtcgtggctctggtggagaaaggagac
actgacctgctgcagaaagccatggactttgtgagtcaggagcgaggggagatggcgatg
ctgtacgatctgttcttcgccttcctgcagacaggccgctaccgcgaggcccgtaagatc
attgagacccctgggctgagggcaagggctgcgcgcatacagtggtatgcagagaaatgt
ataaattctaaccagattgagcccttggagcagatggtggacatgacggacaaactgttc
gagtgcgacagagacgagatgtacagttacctcctccgacaatacgaggcaacaaacgag
tggaagaaagcagaaggactttggacgaagatgcaggaggagaacgtcatccccagagag
aggaccctgctcatgctggccaaaatcctgaagaataacggccaggaggtgcccttcgat
gtgcccgagacgtggtaccaagaagaagcccccccggccaaaagagcggcgcccaaagtg
gaagaaggcccacgctctcaaggcacaagctttcaaagccctatcattgccctctgtaag
aataacaaagcccaagaagccttaaagatctgcaaggaagccaatgataatggtttggca
tttaacgccatcagatacgattacctgatccgctcgctgctggccgaggggtcccttaac
gacgccatggcagtcaaagacattgctacatctcatctgccaacgttccagttgagtcct
gctgccaacgacctgtacatcatcactaacagcaagaaaggccaggctaatgatgctctg
gagagaacgaggtctttgctgcaggcgggccagacgccctcagagctcgccatcatcagg
ctggttcaggcgctcggcaacagcggcaacgtgtcggggatccaggaagtgcaggcgttg
ataagcggccacagcaaggaggtcaacctgtccagcatgatttttgtcaacaacacagcg
atggcacacatcaagagtggtgatgtggaaagtgcaatagaggcgttggaggccatctac
accaatccagacacccagagccagagcatggccttcgtcttcagaaagatactggaagat
aacaatgagaaagcgttggacaaattgagtgctatggcagagcggatagccaatcacttc
gcctgctacagaccggcgtcagacctcttcgtgcagctgctggacgccgacaaagtggag
gacgccaagttcatgctggctcgcattaacgctctggcagaacagacggacgtgctcgtg
tcctacatgtctcagaagtctcagatccccggacagctgggcaagatcaagacccttcag
agcctgatcccagacttcgctgacaaggatgtggtgaacacgtatctgatgaaatgtcat
gttaccgacaaagacttttcgtcggccaaggccctgtatgaagagtggcagaagagcgga
ggggagatagacgagctgtcactcaaacggctggccatgatgtacagagggtccggagag
atggtgcccttcgaagagcccccggagtcctttaggttttatgcagaccagctgaaagag
aggagaacacaatccgagaagaaagcagagacttaa
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