Pseudochaenichthys georgianus (South Georgia icefish): 117459653
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Entry
117459653 CDS
T09629
Symbol
btaf1
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117459653 (btaf1)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117459653 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
ARM_ECM29
Fe-S_assembly
Motif
Other DBs
NCBI-GeneID:
117459653
NCBI-ProteinID:
XP_071061684
LinkDB
All DBs
Position
15:8628596..8684333
Genome browser
AA seq
1847 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHXQELNSLLLKVLIYLRSPNWDTRI
AAGQAVEAIVKNIPEWDPAPRPKEESCEDLSPEDSSCDRLSFYHFDISRLLKHGASLLGS
AGAEFELQEDKNAEMDPKERLARQRKLLQKKLGMDIGAAIGMDTEELFNDEDLDDSCQPS
ELRAEGSKTTAGSSCHNHVAADLIDSEFRPGMSNRQKNKAKRMAKLVAKHRSRDMDPNEK
SNDSFEGEPDEKRWKTTNAVIDQPTTEDKMDNAPDNSGLLEEIQEWPLESFCEELCNDLF
NPSWEIRHGAGTGLREILKSQGAGGGKLVGSTAEQMSRQHQEWIEDLVIRLLCVFALDRF
GDFVSDEVVAPVRETCAQALGVALRHMSETGVSMIVDVLLKLLKEDQWEVRHGGLLGIKY
ALAVRKDLISVLLPRVLAAITEGLQDLDDDVRAVAASALIPVVEGLVQQLPNEVPFIVNT
LWDALLDLDDLTSSTNSIMTLLSLLLTYPRVRQSSMQQSLTILVPRVWPFLRHTISSVRR
AALETLFTLLSKADESCAMWINPILQDMLRHMFQSCILESNEEILELIQKVWMELLSQAP
HQFVVAASCPWMGAWLCLMMQASQIPIDVNMLLEVKARSKDKAGAKGRQCTIQVKETLQE
YIAGAETVTEDSVTRDYVVVRSRLMAARLLGALCRCICDPQVNAASQEIRPAESLGQLLL
FHLNSKSALQRIAVSLVLCEWTALQKDCQVVSSIVQPRLLAILSEHLYYDEIAIPFTRMQ
NECKQLIALLADANIDLQDRLNCSVFTIDQANELVTTIFTESTACLNVRSSQYQALDGKR
QQAQSTMNETNLEWQQLHLRVHMFTACAVINLQVLPEKLNPLVRPLMETIKREENTLIQG
CAASFIAKLLQQCAGRSPCPNLKIIKNLCASACVDSAVTPSSACPVPPTQENTKGSGLDC
THHMVNKTRGIITLYRHQRAAFAITSKRGPTPKAPKIPTTELPPGSTISSDNDESKKPLL
IQRRGAEFSLTTVARHFGSNFTKSLPYLWENTVGPLRTAVTEKQHIDRQIQLERGDAAAQ
ELVNSLQVLEVMAGAMAAELRPLLLEHLPHLFTCLQHPYTAVRHMAARGVGVLSKIAMLE
TMNGFLECVLPWLAAIEDCTKQEGAIEALACVMEQLDVDIVPYIVLLVVPVLGRMSDPSD
SIRFMATQCFATLIRLLPLESGIPDPPAMSADLIRQKARERDFLEQLLDGRKLENYKIPV
PIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDNYLRAQEYAKTK
AADSSPMPSLVVCPPTLTGHWVDEVGKFCSKEYLHPLHYTGPPTERMRLQHQVKKHNLII
ASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRLILSGTPIQNNV
LELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEALHRQVLPFL
LRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVEDSISSTSTEEEEKPK
LKATGHVFQALQYLRKLCNHPSLVLTPQHPEYKRISEQLIGQNSNLRDLQHAPKLSALKQ
LLLDCGLGGGGGSEGGTEAVVAQHRVLIFCQLKSMLDIVENDLLKPKLPSVTYLRLDGSV
PAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAH
RIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIASTVITQDNACMQSMGTDQVLNLFSLD
KGERGEQMASSSGKDSMKSVLDGLGELWDQQQYDTEYNLDSFMTSLQ
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatcaagactcgatcgtttgtttatactgcttgacaccggaacaacaccagta
accaggaaagcagccgcccagcagctcggagaggtggtcaagctccacncacaggaactc
aatagccttctgctaaaggtcttgatctacttaaggagtcctaattgggacacccgaata
gctgcaggccaagctgtcgaggccattgtgaagaatattcctgagtgggacccggcgccg
aggcccaaagaagagtcttgtgaagacttgtctccggaggactcctcttgtgaccgcttg
agtttctaccactttgacatctcccgcctcctcaaacacggagcgtctctgctgggatct
gccggggcggagtttgagctgcaagaggacaaaaatgctgagatggacccgaaggagcgt
ctggcccgccagagaaagctccttcagaagaagttgggtatggacatcggtgcggcaatc
ggcatggacacagaggagctgttcaacgacgaggacctcgacgacagctgccagcccagt
gagctcagagcggaaggaagcaaaaccacagctggatccagctgtcacaaccatgtggct
gctgacttgatcgactcagagttcaggccaggcatgagcaatcgccagaagaataaggct
aagaggatggccaagctggtggccaaacacagatctagagacatggatcccaatgaaaag
agtaacgacagttttgagggcgaacccgatgagaaacggtggaaaaccaccaatgcagtt
attgaccaaccgacaacagaagacaaaatggacaacgctccagataactctggtctttta
gaggagatacaggagtggcctctggagagcttctgtgaggagctctgcaacgacctcttc
aacccttcatgggagatccgccatggtgctggcacaggtcttagagaaatcctcaagtcc
caaggtgcgggtggggggaagctggtgggaagcactgccgagcagatgtcgcggcagcat
caggagtggatcgaggacctagtcatccggctgctctgcgtctttgctctggaccgcttt
ggagattttgtatctgatgaggtggtggctcctgtcagggagacgtgtgcccaggccctc
ggtgtggccctccggcacatgagtgaaacgggtgtctccatgatagtggacgtgctgctg
aagctgttgaaagaggaccagtgggaggtccgtcatggaggcctgctcgggatcaagtac
gccctggctgtccgaaaggacctgatctccgttttgctcccccgggtgctcgctgccatc
actgaaggcctgcaggacctggatgatgacgtcagggccgtggcagcctccgccctcatc
cctgtggtggaaggcttggtacagcagctgcctaatgaggtgcccttcatcgtgaacaca
ctatgggatgctcttctggacttggatgacctcacgtcgtccacgaacagcatcatgacg
ttgttgtccttgctcctcacctatccgagggtccgccagagcagcatgcagcagtcacta
acaatcctcgtcccccgggtttggcccttcttgagacacaccatatcatcagtcagacgg
gcggcgctggaaacccttttcacgctgctgtcaaaagctgacgagagctgtgcgatgtgg
atcaatcctatcctacaagatatgctgcggcacatgttccagtcctgcatcctggagagc
aatgaggaaatcctggagctcattcaaaaggtgtggatggagctgctgtctcaggccccg
catcagttcgtggtggcagccagctgtccctggatgggcgcctggctctgtctcatgatg
caggcctcacaaattcccatagacgtcaacatgctgctagaagtgaaggcccgctctaag
gataaggctggtgcaaagggacgtcagtgtaccattcaggtgaaggagacgctgcaggag
tatatcgctggagcggaaacggtgacggaggactcggtgacgagggactacgtggtggtt
cgatcccgcctcatggctgccaggctgctgggggctctgtgtcggtgtatctgtgaccct
caggtcaacgctgcgtctcaggagatccgaccagccgagtctttaggccagctgctgctc
ttccacctcaactctaagtctgccctgcagcgcatagcggtgtctctggtgctgtgtgag
tggactgctctgcagaaggactgtcaggtggtgtcatccatagtgcagcctcgccttctg
gccattctgtcggagcatctgtactacgatgagatcgccatccccttcacacgcatgcag
aatgaatgcaagcagctcattgctctgctggctgacgcaaatatagacctgcaggaccgc
ctcaactgcagcgtgttcacgatcgatcaagctaacgaactggtaaccaccatctttacc
gagtcgacagcgtgtctgaacgtcaggtccagtcagtatcaggctctggatggtaaacgt
cagcaggctcagtcaacaatgaatgagaccaacttggagtggcagcagctgcatctgcgc
gtccacatgttcacagcctgcgccgtgatcaacctgcaggtgcttccagagaaactcaac
ccgctggtcaggcctctgatggagaccatcaagcgggaggagaacaccctgatccaggga
tgcgctgcttcctttatagccaagctgctgcagcagtgtgccggacgctcgccttgcccc
aacctcaagatcatcaagaacctctgtgcctcggcctgcgtggactccgccgtcacaccc
tcgtctgcctgccccgtgccccccacccaggaaaacaccaaaggcagtgggttggactgc
acgcatcacatggtcaacaaaacccgaggcatcatcaccctgtaccgccaccaaagggca
gcgtttgccatcaccagtaagagggggccgacccctaaagccccaaagatccccactacg
gagcttcctcctggcagcaccatcagctctgataacgatgagagcaagaagccgttactc
attcagagacgaggggcggagttctccctgacaactgttgccaggcactttggctcaaac
ttcaccaagtctctgccgtacctatgggagaacaccgtgggaccactgaggacagcagtg
actgaaaaacaacacatagacaggcagatccagctggagaggggggacgctgccgctcag
gaactggtcaactcgctacaggtgctagaagtcatggcgggggccatggctgctgaactc
aggcctttgctactggagcacttgccccatctgttcacctgcctgcagcacccgtacaca
gcggtacgtcacatggcagcgcgcggtgtcggcgtgctcagtaagatagccatgctggag
accatgaatgggttcctggagtgtgtgctcccctggctcgctgctatcgaagactgcacc
aaacaggagggcgccatcgaagctttagcctgtgtgatggagcagctggatgtggacatt
gttccgtacattgtgcttctcgtagtgcccgtgctgggtcgtatgagtgatcccagtgac
agcattcgattcatggccacacagtgctttgctacactcatccgcctgctgcccctggag
tccggtatacccgacccccccgccatgtctgctgacctgatccgccagaaggccagagag
cgcgacttcctggagcaactactagatggcagaaaattggagaactacaagatcccggtg
cccataaaggctgagctcaggaagtaccagcaggacggagtgaactggctgtccttcctg
aacaaatacaagctgcacgggatcctgtgtgacgacatgggcctcggcaagacgctgcag
tccatctgcatcctggcaggagacaactacctcagggcacaggaatatgccaagacgaaa
gcagcagacagcagccccatgccctctctggtggtgtgtcctcccacgctgacgggccac
tgggtggacgaagtgggcaaattctgctccaaagaatacctccacccactgcactacacc
gggcctcctacagagcggatgaggttgcagcaccaagtgaaaaaacacaatcttataata
gcctcttatgatgtcgtacggaacgacattgacttttttagaaatatcaaattcaactac
tgtatcctcgatgagggtcatgtcatcaagaacggcaagacgaagctttccaaagccatc
aagcagttggctgccaacttccgtctcatcctgtcgggaacgccaattcagaacaatgtc
ctggagctctggtcactgttcgacttcctcatgccgggcttcctcggaacagagcgtcag
tttgcagctcgctacgggaaaccaatcctggccagtcgcgacgccaaaagctcctcgcgg
gaacaggaggcaggtgtcctggcgatggaggccctgcatcgccaggtgctgcccttcctt
ctgaggaggatgaaggaggacgtcctccaggacctgcctcctaaaataattcaggactat
tactgcaatttaagtcctctacaggttcagctgtatgaagactttgcaaagtctcgggcc
aaggccagtgtggaggacagcatctccagcacctccacagaagaggaggagaagcccaaa
ctgaaggccactggccatgtcttccaggcgctgcagtatctgcggaagctgtgcaaccac
ccgagtctggtgttaaccccgcagcatccggagtacaagcgcatctcggagcagctgatt
ggtcagaactccaacctgcgggacctgcagcacgcacccaaactgtccgctctcaaacag
ctgctgttggactgtggcctcggagggggtggaggatcggaggggggcactgaggcggtg
gtggcccagcatcgagtgcttatcttctgtcagctcaagagcatgctggacatcgtggag
aacgacctgctgaaacccaaactgccctccgtcacgtacctgaggctggacggcagcgtg
ccggccggccagcgccactccatcgtctccaggttcaacaatgacccctccatcgatgtg
ctgctgctgaccacccatgttgggggtctgggtctgaacctgacgggggcagacacggtg
gtgtttgtggagcatgactggaaccccatgagggacctgcaggccatggaccgtgcccat
aggataggacagaaacgggtggtgaacgtgtacaggctgatcacacggggcacactggag
gagaagatcatgggtctgcagaaattcaagatgagcatcgccagcactgtcatcacccag
gacaacgcctgcatgcagagcatgggcaccgaccaggtgctcaacctgttcagcctcgac
aagggtgagaggggggagcagatggcctcctcctcagggaaggactccatgaagtcggtg
ctggacgggctgggggagctgtgggaccagcagcagtacgacacagagtacaacctggac
agcttcatgacctccctgcagtag
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integrated database retrieval system
