Pseudochaenichthys georgianus (South Georgia icefish): 117459767
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Entry
117459767 CDS
T09629
Symbol
rin2a
Name
(RefSeq) ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117459767 (rin2a)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117459767 (rin2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
RA_2
FERM_f0
RA_3
Lpg0393_VPS9
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
117459767
NCBI-ProteinID:
XP_033956753
LinkDB
All DBs
Position
15:complement(9911847..9970328)
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AA seq
1096 aa
AA seq
DB search
MSTTIISPSCRQERRGSFFKLIDSFAVEIGTLKKEMGKKTAPAEGDPQTDTLLGLGEEMR
GLFLQTSPCAGIRSGLAGARDSGYDSLRRRLTVLDRLVHTHAVWLQLGLSHQEATDILQS
QPAGSFVVRKSTSLQRKVISLRTNKDSAVAVKDFPVKESQYTFSLMGSGLSFADLFRLVA
FCCISRDVLPFTLQLPEVIASAKTSADLEAVAKLGAGFWDSQLCHRSKDSVFLSGIAAPS
SQTPVSLATTPGRPRLRTRTPSELDCCQSNGALCFINPLFIKVHQPDGEDSTTSRPSGTA
KGNQREEPVGDSLETNNKDPQHHPQVSDQAGQSNPQSLDRNPKLQDHNSPTSSSIQKLSR
SPPPRPPPPQIVPHISAPPIRQRSMPEKIAWINFPKGKGEERGSSLLSRLGSSLSISPSS
SPPKRLSISSPISIPRPSLPMTLQSLSCSPRQAKASPSSSHEEAQCHLALEDQTIEKAVI
RARLSQRNANRNPPLDSSSPPDPSTTSKQADVPGAEEEEAGEECSGGGQRLSDMSLSTDS
SDSLDFSQSSVFFLPPLHDPSPPTMADFDTHLPLSIPPSHLPYSSMEEDDDDDDEDEDEE
EHDYGVSLESDQDQDQDQDLTMVPPGHRTRRRPSAGALVLQRALRGHLRKMSGVFNSLLT
PEKRAIRRVVELSRDKSSYFGCLVQDYLSYMSEGAGTQAWQGYASGLELLQTLRQFITQM
KSYLRQSSELEPPIESLIPEDQIDQVLEKAMHKCLLKTLKPVVSVALKEFQVRSGEWLEL
KENLALAKARLPQDMGVADTLPPDPVAIEKIKHKFHTMIKLYSPEKKVGVLLRVCKLIYT
IMEDNSGRLYGADDFLPMLTYVLAQCDMPQLNNEILYMMELLDPSLLHGEGGYYLTSAYG
AMSLIQNFQEEQAARVLSSETRNTLHQWHRRRTTQRFAPSIDDFQNYLRVALKELDSGCT
AKTLQVRPYASVDEVCRLCAQKFKVSDPQNYGLFLVMEGTSQQLAPDTHPQKIKAELHSR
SQATPFHFVFRKVVPSAAALDLTPNLNNLTGTPDALEDLRALSRDLSPPPPSPLSSGLSP
TLSLSLPTTNGNSISV
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccatcatcagtccatcctgcaggcaggagagaagaggcagtttcttcaag
cttattgattcatttgccgtggaaattggcacgttgaagaaggaaatggggaagaagact
gcgcctgcggaaggagacccgcagacagatacactgcttggactgggcgaagagatgcga
gggctcttcctccagacttccccctgcgctgggatcagatctgggctggctggggccaga
gattcgggctacgattccctccgtcggcgtctcactgttctggacagactggttcacaca
cacgctgtgtggctgcagctgggcctcagccaccaggaggccacagacatcctgcagagc
caacccgctgggtcattcgtggtgaggaagtccaccagcctgcagaggaaagtcatatcc
ctacgtacgaacaaagactctgcggtcgccgtcaaagacttccccgtgaaggagagccag
tacacgttctccctgatggggtcaggcctgagctttgcagaccttttccgcctggtggcg
ttctgctgcatcagcagggacgtgttgccgttcactctccagctcccagaagtcatcgct
tcagccaaaacatccgctgacctcgaggcggttgctaaacttggagcaggcttctgggat
tctcagttgtgccacaggagtaaggactcagtctttttgtcaggaatagctgctccctct
tcccagacaccggtctccttggcgaccaccccagggcgccctcgacttcgaactcgcacc
ccttcagagcttgattgttgccagtccaacggagcactttgcttcatcaaccccctcttc
atcaaggttcaccaaccagatggtgaggacagcaccacttcacgcccctctggtacagca
aagggaaaccagagggaggaacccgttggcgacagcctagaaaccaacaacaaggaccct
caacatcatccgcaggtctcagatcaggcaggtcaaagcaaccctcagagtcttgatagg
aacccaaagctacaggaccacaacagcccaaccagcagcagcattcagaaactaagtagg
tccccacctccacgtccacccccacctcaaattgtgccgcacatatcagcccctccaatc
cgacaacgcagtatgccagaaaagatcgcctggatcaacttcccgaaggggaagggggaa
gagaggggcagcagcctcctttcccgcctgggctcttccctcagcatcagcccctcgtcc
tcccctcccaagagactcagcatcagctcccccatttccatcccccggccctccctgccc
atgactctgcagtctctttcctgctcaccacgtcaggctaaggcctcaccgtcgtctagc
catgaagaggcccaatgccacttggcgctggaggaccagaccattgagaaggccgtcatc
agggccagactctctcagcgtaatgctaacagaaacccccccctggactccagcagtcct
ccagacccttcaacaacaagcaagcaggcagatgtgccaggagcagaagaagaagaagca
ggtgaggaatgcagcgggggcggccagcgtctgagcgacatgagcctttccaccgattcc
tcagactctctggacttctctcagtcttcagtcttctttcttcctcctctgcatgatccc
agtccccccaccatggctgactttgacacccacctccccctctccatcccaccatcccac
ctgccttactccagcatggaggaggatgacgatgatgatgacgaagacgaggatgaagag
gagcatgactatggtgtcagtcttgagagcgaccaggaccaggaccaggaccaggacttg
accatggtgccaccaggccaccgcacgaggcgccgccccagtgccggcgctttggtcctg
cagagggccctgcgagggcatcttcgcaagatgagtggagtgttcaactctctgctgacg
cccgagaagagggccatccgcagggtggtggaactgtcaagggataagagctcgtacttc
ggctgcctggtccaggactacctgagctacatgagcgagggtgcgggcacccaggcttgg
cagggctacgcctctggactggagctgctgcagactcttcgtcagttcattactcagatg
aagagctacctgagacagagctccgagttggagccaccgatcgagagcctcattcccgaa
gaccagatcgaccaagtcctggagaaggccatgcacaagtgcctcctgaagaccctcaag
ccggtggtgagcgtggccctgaaggagttccaggtgcgcagcggggagtggctggagctg
aaggagaacctggccttagccaaggcgcggctgccacaggacatgggcgtggccgacacg
ctgcccccggaccccgtggccatagagaagatcaagcacaagttccacaccatgatcaaa
ctgtactcccccgagaagaaggtcggcgtgctgctgagggtctgcaaactcatctacacc
atcatggaggacaactcgggtcgcctgtatggagccgatgacttcctgcccatgctgacc
tacgtgttggcccagtgcgacatgccccagctgaacaacgagatcctctacatgatggag
ctgctggacccctctctgcttcacggagaaggtggctactacttgaccagcgcgtatgga
gccatgtccctgattcagaacttccaggaggagcaggcggccagagtgctcagctctgaa
accaggaacacgctccaccagtggcaccgccggcgcaccacgcagcgctttgctccgtcc
atcgatgacttccagaactacctgcgggtggcgctgaaggagctggacagcggctgcacc
gccaagactctccaggtccgcccgtacgcctccgtggacgaggtgtgccgcctgtgtgcc
cagaagttcaaagtgtcggacccccagaactacggcctgttcctggtgatggagggcacc
agccagcaactggcgccggacacccaccctcagaagattaaggcggagctccacagccgc
tcgcaggccacgccgttccacttcgtctttcgcaaagtggtcccgtctgcagctgccctc
gatctcacacccaacctcaacaacctcactgggactcctgacgccctggaagacctgcgt
gccctcagcagagacctgtccccccctcccccgagcccactcagctcaggcctcagtcct
actctgagcctcagcctgcccaccaccaatggcaactctatttctgtatga
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