Pseudochaenichthys georgianus (South Georgia icefish): 117459829
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Entry
117459829 CDS
T09629
Symbol
hps1
Name
(RefSeq) BLOC-3 complex member HPS1 isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117459829 (hps1)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
117459829 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
AraC_binding_2
Motif
Other DBs
NCBI-GeneID:
117459829
NCBI-ProteinID:
XP_033956861
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All DBs
Position
15:complement(24012474..24022618)
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AA seq
680 aa
AA seq
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MKCLLISSQSAEVLFHWTDPEFYQNVQAQYGASQEDGHGLPAFEDSISTLFAPIIISCIT
MVDRLGDSYTSFTTENNHIYVLHQFDECLYIAVNGDGEEGEGDLRRKIYVMKKMIEVMFG
MVTLSSNLLKRELRPQDTEQRARLWEHLQSLLETYSHLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNSSVERAGEEVLHAFILVHTKLLAFYSSRNASTLSTSDLLSLIIMS
QNMYPSNTDQDDPNPEDIESTSGSGPESFYTPEPSPTDMDSRSSADMPVRESTPLFEFVD
PDVQMAEDSLHTLEVPPPDPSTPRRVFLEVSLKDGLFPMMPHSMYCLPLWPGITLVLLTK
IPTSAVAMSVYTFLEAFAKLEKRLNEGQEGPAATRGQPTIHDIRSKLDKFIKALGASEIQ
SAQLQNVWTDFKNRIGRGGPGFNRELIRSCKNMKTQLCGVYRQCFLIESGTADSPRRLSP
GLQERAQTMVQDKLMDWKDFLLVKSKRNITMVSYLEDFPGLIHFICVDRSTGQMIAPSLN
ITERNVSELGKGPLAQFIKSKVWSLVSTTRRYLQKGYSTVTLRDGDFYFCYFLWFENETG
YKLEAGDIPVLPDDSAPIGMLAWDYYRKLLRYYSKNHQGEVVKCYELLTVHLGVIPTEVI
LQHCRQLASKLWEPSRNPLL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttgctgatatccagtcagagcgccgaggtcctcttccactggaccgaccca
gagttctatcagaacgtacaggctcagtacggggcgtcccaagaagatggccatgggctt
ccagcctttgaggacagcatcagcactctgtttgctcccatcattatctcctgcatcacc
atggtggacaggctgggggacagctacacctccttcaccacagagaacaaccatatctac
gtcctacaccagtttgatgagtgtctctacattgctgtgaatggagatggtgaggaggga
gagggggatctgaggaggaaaatctacgtgatgaaaaagatgattgaagtcatgtttgga
atggtcaccctcagcagtaacctcctcaagagagaactgcgtcctcaggacacagagcag
agagccaggctgtgggaacacctccagagtctgctggagacctacagccacctacgagag
aacgaccagagcttcctagtggaggcagtggagaggctgattcaccccacgctgtgcgag
cagtgcattgagttcctggagcgccgtttggttcagcagctcaacagcagtgtggagcga
gcgggagaggaagtgctgcacgccttcatcctggttcacactaaactactcgccttctac
tctagccgcaatgcgagcacactctccacctcagacctcctgtccctcatcatcatgtca
cagaatatgtatcctagcaacacggaccaggatgatccaaatcctgaggacattgagagt
acatctggttctggtcctgaaagcttttacaccccagagccctctcctacagacatggac
tcgagaagttcagcagacatgccagtgagagaaagcactcctttgtttgagtttgtggac
ccagacgtccagatggcagaggacagcttgcacactctggaagttcctccgcccgaccct
tcaacccctcgcagagttttcttagaggtctcactcaaagatggactgtttcccatgatg
cctcactccatgtactgcctgcctctgtggcccggcatcacacttgtgctgctaactaag
attcccaccagtgcagtggccatgtcagtgtatacgtttctggaggccttcgccaaactg
gagaagcgtctaaatgaaggccaggaaggaccagctgctaccagaggacagcccactata
cacgacatccgcagcaaactggacaaattcatcaaagccctaggagccagtgagatacag
tccgcacagttacaaaatgtctggacagatttcaagaaccgaatcggcagaggggggcca
gggttcaacagagagcttatccgcagttgtaagaatatgaagacccagctctgtggagta
taccgccagtgtttcctcattgaatctggaacagctgacagtcctcgacggctctccccc
ggcctgcaggagcgggcccagaccatggtgcaagacaagctgatggactggaaggatttt
ttgttggtaaaaagcaagaggaatataaccatggtgtcgtacctggaggacttcccgggc
ctcatacattttatctgcgtggaccgatccacgggccaaatgatcgcaccgtcgctcaac
atcactgaacgcaacgtgtctgagctggggaaggggccattggctcagttcatcaaaagc
aaggtgtggagtctggtcagcacaacgcggcgctatctccagaaggggtactccacggtc
acattgcgcgacggagacttctacttctgctacttcctctggtttgaaaatgaaactggc
tacaagttagaggccggggacatacccgtcctacctgacgactcggcccccattgggatg
cttgcctgggactactacaggaagctgctgcggtactacagcaagaatcaccagggtgag
gtggtgaagtgctacgagctgctgacggttcatctgggggtcatccccactgaggtcatc
ctgcagcactgcagacagctggcaagcaaactgtgggagccatctcgcaatcctctgctg
tag
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