Pseudochaenichthys georgianus (South Georgia icefish): 117459843
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Entry
117459843 CDS
T09629
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117459843 (six2a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117459843 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
HTH_NDX
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
117459843
NCBI-ProteinID:
XP_033956882
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All DBs
Position
15:32110445..32114286
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AA seq
288 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLSSSMNGNKSLLGSSDDDKTPMGTPDHTSHSPTLLLGSGL
QSLHGLAPPPGPSAIPVLSGVDSVHHHHSMHHDSILNPMSSNLVDLGS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcttccgacgtttggttttacgcaggagcaagttgcgtgtgtttgcgaagtt
ctccaacaaggggggaacatcgagcggctcgggcgcttcctctggtccctcccggcgtgt
gagcacctccacaaaaatgagagcgtcctcaaagcgaaagccgtggtcgctttccaccgg
gggaacttccgagagctctacaaaatcctcgagagccaccagttttctccgcacaatcac
ccgaagctgcagcagctgtggctcaaagcgcactacatcgaggcggagaagctgagaggc
cgtccgctcggcgccgtggggaagtaccgcgtccggagaaagttccccctgcctcgctcc
atctgggacggagaagagacaagctactgcttcaaggagaagagcaggagtgtcctgcgg
gagtggtacacccacaatccttacccatccccgcgggagaaaagagagctggccgagggc
acgggactcaccaccacgcaggtcagcaactggttcaaaaaccgacggcagcgagaccga
gcagcggaggcgaaggaaagggaaaacaacgagaactccaacagcaatagtcacaaccca
ttgagttcttccatgaatggaaataaatctctcctggggagctcggacgacgataaaaca
cccatggggaccccggatcacacgtcccacagcccgactctgctcctcggctccggttta
cagtccctgcacggccttgcgcccccgcctggacccagcgccatcccggttctcagcggt
gtagactcggtgcaccatcaccactcaatgcaccacgactccatactgaaccctatgtct
tctaatctagtggaccttggctcttaa
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