Pseudochaenichthys georgianus (South Georgia icefish): 117459981
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Entry
117459981 CDS
T09629
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117459981
04082 Neuroactive ligand signaling
117459981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117459981
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
GABA-A
117459981
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117459981
NCBI-ProteinID:
XP_033957058
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Position
15:7090893..7152977
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AA seq
437 aa
AA seq
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MLNAEMNEGEILPPTIHKLMKGYNKYLRPFFDNGPVTVGMSLDIASIDTISEINMDYTAT
IFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFIVDSKKSFLHDITVENRLIRIFPN
GTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWGYNINDIMFYWTRGNESVSGLDTL
QLAQYTVEDHYTSVSEAVYETGNYPRLVFHFELKRSILYFILETYVPSSLLVVLSWVSFW
ISLSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALIEYA
VAHFCSLSHMDSHIFMHYGHHMHDLDDEMNGIITTISNHNRAKRRKEAAATQTPAPASLE
LIVSPSSPSGSEPKPEAPPPEPTHWCLTALATVRKVLRSFTCCTVENPHHIDNYSRVTFP
LSFVMVNLLYWTYYLYF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacgcagaaatgaacgaaggagagattctgcctcccaccattcataagctgatg
aaaggatacaacaagtacctcaggcccttctttgacaatggtcctgtaacagtgggtatg
agcctggacatcgccagcattgacactatctcagagatcaacatggactataccgccacc
atctttctccgccagcgctggaccgacgagcgcttggtgtttgaaggcaacaagagcctg
agcctggacgggcggctggtggagctcctctgggtccctgacaccttcatcgtggactcc
aagaagtccttcctccatgacatcaccgtggagaacaggctgatacgcatcttccccaac
gggaccgtcctttacgctctgaggatcaccaccaccgtggcctgcaacatggatctgacc
aagtatcccatggacaaacagacctgcacactacaactggagagctggggttacaacatc
aatgatatcatgttctactggaccagaggaaacgagtctgtcagcggattggacacccta
cagctggcccagtacaccgtagaggatcactacacttctgtctcagaggccgtctatgaa
actggcaactacccgaggctggtgttccactttgagctgaagagaagcattctgtacttc
atcctggagacctacgtcccctccagcctgcttgttgtcctctcatgggtttccttctgg
atctccctgtcctctgttccagcacgcatttgtataggtgtgaccacggtcctgaccatg
accactctgatgatgggagcccggacgtcactgcccaatgccaactgcttcatcaaggcc
atcgatgtttacctgggaatctgcttcagcttcatctttggagcgctcatcgagtacgcc
gtggcgcacttctgcagcctcagtcacatggactcacacatcttcatgcattacggccac
cacatgcacgacctggacgacgaaatgaacggcatcatcaccaccatctcaaaccacaac
agggccaagagacgcaaggaggctgccgcgactcagaccccggctcccgcctccctagaa
ctcattgttagcccgtccagcccctcgggcagcgagccaaagcccgaggcgccccccccg
gagcccacccactggtgcctcactgctctggccacggtccgcaaagtgctccgctccttt
acatgctgtaccgtggagaacccccaccacatagacaactactccagagtcacctttccc
ctctcttttgtcatggttaacctgctctactggacatattatctgtacttttag
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