Pseudochaenichthys georgianus (South Georgia icefish): 117460022
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Entry
117460022 CDS
T09629
Symbol
six3a
Name
(RefSeq) homeobox protein SIX3a
KO
K19473
homeobox protein SIX3/6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117460022 (six3a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117460022 (six3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
117460022
NCBI-ProteinID:
XP_033957119
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All DBs
Position
15:complement(32134560..32138628)
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AA seq
294 aa
AA seq
DB search
MVFRSPLELYPSHFFLPNFADRPVLLANSAPTTRSPEDLSMFQLPTLNFSPEQVASVCET
LEETGDIERLGRFLWSLPVAPGACEAINKHESILRARSVVAFHTGNFRDLYHILENHKFT
KDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTR
SLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPS
GMRSLSEAGLTPRSSAESPSTAASPTTSVSSMAERVDTGTSILSVTSSDSECDV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggttttcagatcccctttagagctttatccctcccatttcttcctgccaaacttcgct
gatcgccctgtgctattggcgaacagcgctcccaccaccaggtctccagaagacttgtcc
atgtttcagctaccgaccctcaacttctccccggagcaggtggcgagcgtctgtgagacg
ctggaggagaccggggacatcgagcggctgggccgcttcctctggtccctgccggtggct
ccgggagcatgcgaggcgatcaacaagcacgagtccatcctgcgcgcccgatccgtagtt
gcgttccacacggggaatttcagagacctctaccacatcctggagaaccacaagttcacc
aaggactcgcacggcaaactgcaggccatgtggctggaagcacactatcaggaggccgag
aagctccgcggtcgccccctcggaccggtcgataagtaccgggtgcggaagaagtttccg
ctgcctcggaccatctgggacggcgagcagaagacgcactgtttcaaagagcggacacgg
agcctgctgagggagtggtaccttcaggacccatatcccaaccccagcaagaaaagggaa
ctggctcaagccactggactcactcctacacaggtcggaaactggtttaaaaaccggagg
caacgagacagagccgcggcagccaaaaacaggctccaacaccaagcaataggaccgagc
ggtatgaggtccctgtcagaggccggcctcacccctcgaagctcggcagagtcgccctca
accgcggccagtccgaccaccagcgtttccagtatggcagagagagttgataccgggacg
tccattctgtccgtcacatccagcgactcggagtgcgatgtatga
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integrated database retrieval system
