Pseudochaenichthys georgianus (South Georgia icefish): 117460070
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Entry
117460070 CDS
T09629
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03430
Mismatch repair
pgeo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117460070 (mlh1)
03460 Fanconi anemia pathway
117460070 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117460070 (mlh1)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117460070 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
117460070
NCBI-ProteinID:
XP_033957185
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Position
15:14755569..14767203
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AA seq
729 aa
AA seq
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MAGVIRRLDEAVVNRIAAGEVIQRPANAVKELIENCLDAKSTNIQVTVKDGGLKLLQIQD
NGTGIRREDMEIVCERFTTSKLQTFEDLSAIATYGFRGEALASVSHVAHVTITTKTADAK
CAYRANYSDGKLKGPPKPCAGNQGTQILLEDLFYNVSTRRKALKSPGDEYSRIVEVVSRY
AIHNSGKSFSVKKQGETVADVRTLPNASVVDNIRGVFGNAVSRELIEVGCEDQKLAYQMK
GHISNANYSMKKCILVLFINHRLVESAALKKAIETVYAAYLPKNTHPFLYLSLEIAPHNV
DVNVHPTKHEVHFLHEDSIIESVQKHIESKLLGSNSSRTYFTQTLLPGLSAAGGSEGKSS
SGAAESSDRVYAHQMVRTDCRAQKLDAFLQPKEKPAPDPGSAGPSSREAASRSAQPDRTE
MEETDDADMLQALTRQEAEEPGGGGDLADSVERKRPRKEQQEEEVEDLTAAATPKRRAIK
LSSIKELRTEITENTHRGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLSQELFYQ
ILIYDFGNFGVLRLSTPAPLYDLAMLALDSEESGWTEDDGPKEGLAQYIVDFLKKKTEML
GDYFSVEIDQEGNLTGLPLLLDKYTPVMEGLPMFILRLATEVNWDNERECFRDFGKECSM
FYSIRKRYILEAEPGEEQEAEVNSWRWKVEHVIFKYFRTLFSPPKNFSEDGTVLQIANLP
DLYKVFERC
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgttatccggaggctcgacgaggctgttgtcaaccggatagcagccggagaa
gttatccagcgtcctgccaacgccgtcaaagaactgattgagaactgtttggatgccaag
tccaccaacattcaggtgacagtgaaagacggcggcctgaagctccttcagattcaggac
aacggaactggcatcaggagagaagatatggaaatagtttgtgagaggtttaccaccagc
aagctgcagacatttgaggacctctcagctatagccacctatggattcagaggagaggcc
cttgctagtgtgagccatgttgcccatgtgaccataacaacgaagacagctgatgccaag
tgtgcctacagagccaactacagcgatggcaaactgaaaggccctcccaaaccatgtgct
ggaaaccagggcacacagattcttttggaggacctcttctataacgtgtccacccggagg
aaagctttaaaaagccccggagatgagtactcacggattgtggaagtggtcagcaggtat
gccatacacaattcagggaagagtttctctgtcaaaaagcaaggagagacggtggcggat
gtgaggaccctacccaacgcctctgtagtggataatattcgaggagtttttggcaatgca
gtcagcagggagctgatcgaagtcggctgtgaggatcagaagctcgcctatcagatgaaa
ggacacatctcgaatgcaaattactccatgaagaaatgcatcctggtcctgttcatcaac
catcgcctggtggagtccgctgctttgaagaaggccatcgagacggtttatgctgcttac
cttcccaagaacacacacccctttctttacctcagcttggagatcgctccgcacaacgta
gacgtgaatgtccatcccacaaaacacgaagtgcacttcctgcacgaagacagcatcata
gagagcgtccagaagcacatcgagagcaaactccttggctccaactcctctcgcacatat
ttcactcagacgttgctgccgggtctctcagccgcaggcggcagtgaggggaagtcctcc
agcggcgcggcagagtccagcgatcgagtctacgcacatcagatggtgaggaccgactgc
cgcgctcagaagctggacgccttcctgcagcccaaagagaagccggcccctgaccctgga
tcagccggacccagcagcagggaggctgcgagcagaagtgcccagcctgacaggacagag
atggaggagacggacgatgcagacatgctgcaggccctgactcggcaggaagcagaggag
ccaggaggaggaggagacctggcagactctgttgaaaggaagcgacccaggaaagagcag
caggaggaggaagtggaggacctgacggctgcagcgacacccaagagacgagccattaaa
ctgtccagcatcaaagagctcagaactgagatcactgagaacacacacagaggccttcaa
gaaatgttgcagaaccactcgtttgtgggctgcgtcaaccctcagtggactctgatccaa
catcacaccaaactgtacctgctgaacaccaccaagctcagccaggagcttttctaccaa
atactcatctacgacttcgggaactttggtgtattaagactatctaccccggctccactc
tacgacctggccatgctggctctggactctgaggagagcggctggacagaagacgacggc
cctaaagaaggcctggctcagtacatagtggacttcctgaagaagaaaactgagatgctg
ggggactacttctctgtggagatagaccaggaagggaatctgaccgggctgccgttactg
ctcgacaagtacaccccggtgatggagggtctccccatgttcatcctgcgcctggccact
gaggtgaactgggacaatgagagagagtgcttcagagactttggtaaggagtgcagcatg
ttctactccatcaggaagcgctacatcctggaggcggagcccggagaggagcaggaggct
gaggtgaactcatggcgatggaaagtcgagcacgtcatattcaaatatttccgaaccctc
ttcagtcctccgaagaacttcagcgaggacggcactgtgctgcagatcgccaacttaccc
gacctctataaagtgtttgagaggtgttaa
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