Pseudochaenichthys georgianus (South Georgia icefish): 117460076
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Entry
117460076 CDS
T09629
Name
(RefSeq) syntaxin-12-like isoform X1
KO
K13813
syntaxin 12/13
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117460076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117460076
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117460076
Membrane trafficking [BR:
pgeo04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
117460076
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117460076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
Syntaxin
UPF0137
SAS4
Synaptobrevin
DUF3099
DUF5798
Kgd4-YMR31
FliT
Motif
Other DBs
NCBI-GeneID:
117460076
NCBI-ProteinID:
XP_033957191
LinkDB
All DBs
Position
15:24415326..24428357
Genome browser
AA seq
323 aa
AA seq
DB search
MRLNDRLPAANKPTEEEEPGFGIRKGKAVFDGWTRNISKHQNKALHLRQHHSLADMSYDK
AESYRPVLRDFNTLIQTCSSNIQKITQNTAQIKSIVSQLGTSQDSSQLQDRLQQIQHYTN
QLAKETNKHLKGLGSVPLPTSPSEQRQQKIQRDRLMNDFSAALNNFQAVQRSAAEKEKQS
VARARAGSRLSAEDTSRDERLVSFDNQEDWGQMTTQTEEAPITEEDLELIKDRETNIRQL
ESDILDVNQIFKDLAVMIHDQGEMIDSIEANVENAEVHVERGTEQLQRAAYYQQKSRKRM
CIIAMVCSIVLVILAIIIWQAAK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctaaacgataggctgccagccgccaataaaccaacagaagaagaagaaccagga
ttcgggatcagaaaaggaaaagcagtttttgacggctggacgaggaatataagcaaacac
caaaataaagctctacacttgaggcagcatcactctctggcagacatgtcttacgacaaa
gcagagagctaccgccccgtcctccgggacttcaacaccctcatccagacatgcagctcc
aacatccagaagatcacacagaacaccgctcagatcaagagcatcgtgagccagctgggg
acgagtcaggactccagccagctgcaggaccgactgcagcagatacagcattacaccaac
cagctggcgaaagaaaccaacaagcacctgaaagggctggggtccgtccctctgcccacc
tccccctcagagcagaggcagcagaagatccagagggaccggctgatgaacgacttctca
gcggctctcaacaacttccaggcggtgcagcggagcgcggcggagaaggagaagcagtct
gtggctcgggccagagccgggtcccgcctgtcggctgaagacacttctcgggatgagagg
ctcgtttcctttgataaccaggaggactgggggcagatgaccacgcagacagaggaggcg
cctatcacagaagaggacctggagctcatcaaggatcgagagaccaacatcagacagctg
gagtcggacattttggatgtaaaccagatctttaaggacctggcagtgatgatccacgat
cagggagagatgattgatagcatcgaggcgaatgtggagaatgctgaagttcatgtggag
cgaggaacagagcagctgcagagagccgcctactaccagcaaaagtcccggaagaggatg
tgtatcatcgccatggtttgctccatagtgctcgtcatacttgccatcattatctggcaa
gctgctaagtga
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integrated database retrieval system
