Pseudochaenichthys georgianus (South Georgia icefish): 117460181
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Entry
117460181 CDS
T09629
Name
(RefSeq) peripherin isoform X2
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117460181
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
117460181
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
GSCFA
MGS
DUF2935
Motif
Other DBs
NCBI-GeneID:
117460181
NCBI-ProteinID:
XP_033957346
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All DBs
Position
15:26794633..26805501
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AA seq
776 aa
AA seq
DB search
MENRLLFPHRKAQDEYSQCKPTRSGLDSRAVSTGMDLTNPRKFNEKELMHGLNDRLAGFI
EKVHYLQYQNTLLEREIGEIRGKAKPASCLEEEYGPELRKLRQLLQEITHQKHQIEVEHD
NFEEDLSNLRRQHDQEARSRSDAESDIVVLKKDINDAYQAKLQMDKKAQALVDEIQFLKG
NHEAEVSEIMDQIQDAQVTVKAHAFGNSGITAALRDIRAQLEGHAVSDVQQQGDHFQSQF
ARLTEAAESQREALKATQQEIQEYRKRLQAKDIELDCTYGTREALQKQLRDVEDRHQEEM
IHYQNTIKELENELINCKFDMSGYLREYQDLLNVKMALDVEIMTYRKLLCGEEARLTAMS
DTHVSLPYIYHQSPVYTLPCLRPGGPHRRAEPHYKFVEEIITETTREIEMSEYEETDSEE
TDEQEGTKRDRGSSEEEMDNKDSGNVERKQMSDREQNQVAPAGDLVNGCDAGSPVEVDDS
DNDQKSKEETEAADDEEDIDTITPNTVVLNESRDEKDNEQQQKVAEETKEEKEVGAPGTV
VEKDISPKSDDLKPEVPVEDELLKKSDSKKGDAEKDSFIPAQAEKPVDESSAQVSRESDK
TQELSSVEEQDKVPALETAEKTADLTQETKSTVSVEKELSEKTQVSLTIPKSEAKESKSE
AKEISKSEACKGEDKVAKVIEDDKHGSIKDENKESSPESDVKSLPQVEDQKLNSGGGTNE
VQTVLPGEKTDVNTEIKEMHQGAPEGRQGQTLLEDSENIKDPQGTTEKVESSKSEK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagactcctctttccgcacaggaaagctcaagatgagtattcacagtgcaag
ccgacacgttcgggcttagatagcagggccgtctccaccggcatggatttgactaaccct
aggaagtttaatgagaaggaattgatgcatggcttaaacgatcgtctcgcaggattcata
gagaaggtgcactacctgcagtaccagaatactctgctagagagagaaatcggtgagata
agagggaaagcgaaacccgcatcttgtctggaggaagagtatggaccagagctcaggaaa
ctgaggcagctgcttcaggaaatcactcatcagaagcatcagattgaagtcgagcacgac
aattttgaggaagacctgtccaatttaaggagacaacatgaccaggaagcgaggagcaga
tcggatgcagagagcgatatcgtggtcctcaagaaggacattaatgacgcgtatcaggct
aaactacagatggacaagaaagcgcaggctctcgtggatgaaatccagttccttaaggga
aaccatgaagccgaggtgtcagagataatggaccaaatccaggatgcacaggtgactgtc
aaggcgcatgcatttggaaactccggaattactgcggcactccgggacattagggcacaa
ctggaaggtcatgccgtgtctgacgtccagcagcagggagaccatttccaatctcagttt
gcaaggctaacagaggcagctgagagccagagagaggcgttaaaagcgacccagcaagag
atccaggagtacaggaagcgcctgcaggccaaggacatcgagctggactgcacttatggc
accagggaggcgctgcagaagcaactccgtgacgtggaggatcgccaccaggaagaaatg
attcattaccagaacacaatcaaagaacttgaaaatgagctcataaattgcaaatttgac
atgtctggttacctgcgggagtaccaggacctgttgaatgtgaagatggctttagatgtg
gagataatgacttataggaaacttctctgcggtgaggaggctcgtctaaccgcgatgtcc
gacacccacgtctccctgccttacatctaccaccagtcccccgtttacacgctgccctgt
ctgagaccaggaggcccacacagacgcgccgagccccactacaagtttgtggaggagatc
ataacggagaccaccagggaaatagagatgtccgaatatgaggagacggattcagaggag
acagatgagcaggagggtaccaaaagagatagagggagcagtgaggaagagatggataat
aaagacagtggaaacgtggaaagaaagcagatgtctgacagagagcagaatcaagtagca
ccagctggggatttagtgaatggatgtgatgctggcagtcctgtggaggtggatgatagt
gacaatgatcaaaaaagtaaagaagagactgaagcagctgacgatgaagaggatatagat
acaattactcctaacacagtcgtattaaatgaaagccgtgatgagaaagataacgagcaa
cagcaaaaagtagcagaagagacaaaagaagagaaagaagttggagctccaggtacagtg
gttgagaaagatatatctccaaagtcagatgatttaaagccagaggtccctgtggaggat
gaacttctgaaaaaatctgatagtaaaaaaggagatgctgagaaagatagttttatccca
gctcaagcagagaagcctgttgacgagtcctcagctcaggtgtctagagaatcagacaaa
actcaagagctaagcagcgttgaagagcaagataaggtacctgctctagaaacagcagag
aaaactgcagatttaacacaagagacaaaaagcactgtgtccgtagagaaagagctttca
gaaaagactcaagtatctttgactataccaaagagtgaggcaaaggaaagcaaaagtgag
gcaaaggaaatcagtaaatctgaagcctgcaaaggtgaggacaaagtagcaaaagtcatt
gaagatgataaacatggtagcattaaagatgaaaataaagagtcttctcctgaatctgat
gtgaaaagtcttcctcaagtggaggaccagaagctgaacagtggggggggaaccaatgaa
gtccaaactgtgttgccaggagaaaagacagacgtcaatacagaaatcaaagagatgcat
cagggagcaccggaaggacgccagggtcagacactgcttgaagattcagagaacataaag
gatcctcagggtacaactgagaaggtggagagtagtaagtcagagaaataa
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